Literature DB >> 29845349

Alternative splicing and cancer metastasis: prognostic and therapeutic applications.

Diego M Marzese1, Ayla O Manughian-Peter1, Javier I J Orozco1, Dave S B Hoon2,3.   

Abstract

Metastatic cells exhibit an extraordinary phenotypic plasticity, not only in adapting to unfamiliar microenvironments but also in surviving aggressive treatments and immune responses. A major source of phenotypic variability is alternative splicing (AS) of the pre-messenger RNA. This process is catalyzed by one of the most complex pieces of cellular molecular regulatory events, the spliceosome, which is composed of ribonucleoproteins and polypeptides termed spliceosome factors. With strong evidence indicating that AS affects nearly all genes encoded by the human genome, aberrant AS programs have a significant impact on cancer cell development and progression. In this review, we present insights about the genomic and epigenomic factors affecting AS, summarize the most recent findings linking aberrant AS to metastatic progression, and highlight potential prognostic and therapeutic applications.

Entities:  

Keywords:  Alternative splicing; Cancer metastasis; Epigenetics; Prognostic; Therapeutics

Mesh:

Substances:

Year:  2018        PMID: 29845349     DOI: 10.1007/s10585-018-9905-y

Source DB:  PubMed          Journal:  Clin Exp Metastasis        ISSN: 0262-0898            Impact factor:   5.150


  90 in total

1.  Exome sequencing identifies recurrent somatic mutations in EIF1AX and SF3B1 in uveal melanoma with disomy 3.

Authors:  Marcel Martin; Lars Maßhöfer; Petra Temming; Sven Rahmann; Claudia Metz; Norbert Bornfeld; Johannes van de Nes; Ludger Klein-Hitpass; Alan G Hinnebusch; Bernhard Horsthemke; Dietmar R Lohmann; Michael Zeschnigk
Journal:  Nat Genet       Date:  2013-06-23       Impact factor: 38.330

Review 2.  Shuttling SR proteins: more than splicing factors.

Authors:  Laure Twyffels; Cyril Gueydan; Véronique Kruys
Journal:  FEBS J       Date:  2011-08-24       Impact factor: 5.542

3.  Fibroblast growth factor receptor-1 alpha-exon exclusion and polypyrimidine tract-binding protein in glioblastoma multiforme tumors.

Authors:  W Jin; I E McCutcheon; G N Fuller; E S Huang; G J Cote
Journal:  Cancer Res       Date:  2000-03-01       Impact factor: 12.701

Review 4.  Regulation of splicing by SR proteins and SR protein-specific kinases.

Authors:  Zhihong Zhou; Xiang-Dong Fu
Journal:  Chromosoma       Date:  2013-03-24       Impact factor: 4.316

5.  Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing.

Authors:  Marcin Imielinski; Alice H Berger; Peter S Hammerman; Bryan Hernandez; Trevor J Pugh; Eran Hodis; Jeonghee Cho; James Suh; Marzia Capelletti; Andrey Sivachenko; Carrie Sougnez; Daniel Auclair; Michael S Lawrence; Petar Stojanov; Kristian Cibulskis; Kyusam Choi; Luc de Waal; Tanaz Sharifnia; Angela Brooks; Heidi Greulich; Shantanu Banerji; Thomas Zander; Danila Seidel; Frauke Leenders; Sascha Ansén; Corinna Ludwig; Walburga Engel-Riedel; Erich Stoelben; Jürgen Wolf; Chandra Goparju; Kristin Thompson; Wendy Winckler; David Kwiatkowski; Bruce E Johnson; Pasi A Jänne; Vincent A Miller; William Pao; William D Travis; Harvey I Pass; Stacey B Gabriel; Eric S Lander; Roman K Thomas; Levi A Garraway; Gad Getz; Matthew Meyerson
Journal:  Cell       Date:  2012-09-14       Impact factor: 41.582

Review 6.  The spliceosome as a target of novel antitumour drugs.

Authors:  Sophie Bonnal; Luisa Vigevani; Juan Valcárcel
Journal:  Nat Rev Drug Discov       Date:  2012-11       Impact factor: 84.694

7.  Splicing factor SF3b as a target of the antitumor natural product pladienolide.

Authors:  Yoshihiko Kotake; Koji Sagane; Takashi Owa; Yuko Mimori-Kiyosue; Hajime Shimizu; Mai Uesugi; Yasushi Ishihama; Masao Iwata; Yoshiharu Mizui
Journal:  Nat Chem Biol       Date:  2007-07-22       Impact factor: 15.040

8.  U2AF1 mutations alter splice site recognition in hematological malignancies.

Authors:  Janine O Ilagan; Aravind Ramakrishnan; Brian Hayes; Michele E Murphy; Ahmad S Zebari; Philip Bradley; Robert K Bradley
Journal:  Genome Res       Date:  2014-09-29       Impact factor: 9.043

9.  Inhibitors of CLK protein kinases suppress cell growth and induce apoptosis by modulating pre-mRNA splicing.

Authors:  Shinsuke Araki; Ryo Dairiki; Yusuke Nakayama; Aiko Murai; Risa Miyashita; Misa Iwatani; Toshiyuki Nomura; Osamu Nakanishi
Journal:  PLoS One       Date:  2015-01-12       Impact factor: 3.240

10.  Targeting SRPK1 to control VEGF-mediated tumour angiogenesis in metastatic melanoma.

Authors:  M V Gammons; R Lucas; R Dean; S E Coupland; S Oltean; D O Bates
Journal:  Br J Cancer       Date:  2014-07-10       Impact factor: 7.640

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  17 in total

1.  The Long Noncoding RNA NEAT1 Promotes Sarcoma Metastasis by Regulating RNA Splicing Pathways.

Authors:  Jianguo Huang; Mohit Sachdeva; Eric Xu; Timothy J Robinson; Lixia Luo; Yan Ma; Nerissa T Williams; Omar Lopez; Lisa D Cervia; Fan Yuan; Xiaodi Qin; Dadong Zhang; Kouros Owzar; Nalan Gokgoz; Andrew Seto; Tomoyo Okada; Samuel Singer; Irene L Andrulis; Jay S Wunder; Alexander J Lazar; Brian P Rubin; Krista Pipho; Stephano S Mello; Jimena Giudice; David G Kirsch
Journal:  Mol Cancer Res       Date:  2020-06-19       Impact factor: 5.852

Review 2.  Impacts and mechanisms of alternative mRNA splicing in cancer metabolism, immune response, and therapeutics.

Authors:  Qiu Peng; Yujuan Zhou; Linda Oyang; Nayiyuan Wu; Yanyan Tang; Min Su; Xia Luo; Ying Wang; Xiaowu Sheng; Jian Ma; Qianjin Liao
Journal:  Mol Ther       Date:  2021-11-15       Impact factor: 11.454

3.  A prometastatic splicing program regulated by SNRPA1 interactions with structured RNA elements.

Authors:  Lisa Fish; Matvei Khoroshkin; Albertas Navickas; Kristle Garcia; Bruce Culbertson; Benjamin Hänisch; Steven Zhang; Hoang C B Nguyen; Larisa M Soto; Maria Dermit; Faraz K Mardakheh; Henrik Molina; Claudio Alarcón; Hamed S Najafabadi; Hani Goodarzi
Journal:  Science       Date:  2021-05-14       Impact factor: 47.728

4.  Systematic Profiling of Alternative Splicing for Sarcoma Patients Reveals Novel Prognostic Biomarkers Associated with Tumor Microenvironment and Immune Cells.

Authors:  Chuan Hu; Yuanhe Wang; Chuan Liu; Rui Shen; Bo Chen; Kang Sun; Huili Rao; Lin Ye; Jianjun Ye; Shaoqi Tian
Journal:  Med Sci Monit       Date:  2020-07-19

5.  Uncovering the signaling landscape controlling breast cancer cell migration identifies novel metastasis driver genes.

Authors:  Esmee Koedoot; Michiel Fokkelman; Vasiliki-Maria Rogkoti; Marcel Smid; Iris van de Sandt; Hans de Bont; Chantal Pont; Janna E Klip; Steven Wink; Mieke A Timmermans; Erik A C Wiemer; Peter Stoilov; John A Foekens; Sylvia E Le Dévédec; John W M Martens; Bob van de Water
Journal:  Nat Commun       Date:  2019-07-05       Impact factor: 14.919

6.  Apoptosis in Cancer Cells Is Induced by Alternative Splicing of hnRNPA2/B1 Through Splicing of Bcl-x, a Mechanism that Can Be Stimulated by an Extract of the South African Medicinal Plant, Cotyledon orbiculata.

Authors:  Tshepiso Jan Makhafola; Mzwandile Mbele; Kiren Yacqub-Usman; Amy Hendren; Daisy Belle Haigh; Zoe Blackley; Mervin Meyer; Nigel Patrick Mongan; David Owen Bates; Zodwa Dlamini
Journal:  Front Oncol       Date:  2020-10-08       Impact factor: 6.244

7.  Suppression of Heterogeneous Nuclear Ribonucleoprotein C Inhibit Hepatocellular Carcinoma Proliferation, Migration, and Invasion via Ras/MAPK Signaling Pathway.

Authors:  Jiejun Hu; Dong Cai; Zhibo Zhao; Guo-Chao Zhong; Jianping Gong
Journal:  Front Oncol       Date:  2021-04-16       Impact factor: 6.244

Review 8.  Alternative Splicing of Pre-mRNA in the Control of Immune Activity.

Authors:  Zhongjing Su; Dongyang Huang
Journal:  Genes (Basel)       Date:  2021-04-15       Impact factor: 4.096

9.  Identification of survival-related alternative splicing signatures in acute myeloid leukemia.

Authors:  Biyu Zhang; Lei Yang; Xin Wang; Denggang Fu
Journal:  Biosci Rep       Date:  2021-07-30       Impact factor: 3.840

10.  Global Signaling Profiling in a Human Model of Tumorigenic Progression Indicates a Role for Alternative RNA Splicing in Cellular Reprogramming.

Authors:  Joseph A Caruso; Nicholas J Carruthers; Bryan Thibodeau; Timothy J Geddes; Alan A Dombkowski; Paul M Stemmer
Journal:  Int J Mol Sci       Date:  2018-09-20       Impact factor: 5.923

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