Literature DB >> 29792825

G1/S Transcription Factor Copy Number Is a Growth-Dependent Determinant of Cell Cycle Commitment in Yeast.

Savanna Dorsey1, Sylvain Tollis2, Jing Cheng3, Labe Black1, Stephen Notley1, Mike Tyers4, Catherine A Royer5.   

Abstract

To understand how commitment to cell division in late G1 phase (Start) is controlled by growth and nutrients in budding yeast, we determined the absolute concentrations of the G1/S transcription factors SBF (composed of Swi4 and Swi6) and MBF (composed of Mbp1 and Swi6), the transcriptional repressor Whi5, and the G1 cyclins, Cln1 and Cln2, in single live yeast cells using scanning number and brightness (sN&B) microscopy. In rich medium, Whi5, Mbp1, and Swi6 concentrations were independent of cell size, whereas Swi4 concentration doubled in G1 phase, leading to a size-dependent decrease in the Whi5/Swi4 ratio. In small cells, SBF and MBF copy numbers were insufficient to saturate target G1/S promoters, but this restriction diminished as cells grew in size. In poor medium, SBF and MBF subunits, as well as Cln1, were elevated, consistent with a smaller cell size at Start. A mathematical model constrained by sN&B data suggested that size- and nutrient-dependent occupancy of G1/S promoters by SBF/MBF helps set the cell size threshold for Start activation.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  G1/S transcription factors; Start; absolute protein concentration; cell growth; cell size; cyclin-dependent kinase; inhibtor; mathematical model; nutrients; scanning number and brightness microscopy

Mesh:

Substances:

Year:  2018        PMID: 29792825     DOI: 10.1016/j.cels.2018.04.012

Source DB:  PubMed          Journal:  Cell Syst        ISSN: 2405-4712            Impact factor:   10.304


  18 in total

Review 1.  Characterizing proteins in their cellular environment: Examples of recent advances in quantitative fluorescence microscopy.

Authors:  Catherine A Royer
Journal:  Protein Sci       Date:  2019-05-22       Impact factor: 6.725

2.  Cell-size regulation in budding yeast does not depend on linear accumulation of Whi5.

Authors:  Felix Barber; Ariel Amir; Andrew W Murray
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-09       Impact factor: 11.205

3.  Scaling of G1 Duration with Population Doubling Time by a Cyclin in Saccharomyces cerevisiae.

Authors:  Heidi M Blank; Michelle Callahan; Ioannis P E Pistikopoulos; Aggeliki O Polymenis; Michael Polymenis
Journal:  Genetics       Date:  2018-08-27       Impact factor: 4.562

4.  Growth-dependent signals drive an increase in early G1 cyclin concentration to link cell cycle entry with cell growth.

Authors:  Robert A Sommer; Jerry T DeWitt; Raymond Tan; Douglas R Kellogg
Journal:  Elife       Date:  2021-10-29       Impact factor: 8.140

5.  Transcriptional and chromatin-based partitioning mechanisms uncouple protein scaling from cell size.

Authors:  Matthew P Swaffer; Jacob Kim; Devon Chandler-Brown; Maurice Langhinrichs; Georgi K Marinov; William J Greenleaf; Anshul Kundaje; Kurt M Schmoller; Jan M Skotheim
Journal:  Mol Cell       Date:  2021-11-02       Impact factor: 17.970

6.  The G1/S repressor WHI5 is expressed at similar levels throughout the cell cycle.

Authors:  Sylvain Tollis
Journal:  BMC Res Notes       Date:  2022-07-15

7.  Differential Scaling of Gene Expression with Cell Size May Explain Size Control in Budding Yeast.

Authors:  Yuping Chen; Gang Zhao; Jakub Zahumensky; Sangeet Honey; Bruce Futcher
Journal:  Mol Cell       Date:  2020-04-03       Impact factor: 17.970

8.  Differential scaling between G1 protein production and cell size dynamics promotes commitment to the cell division cycle in budding yeast.

Authors:  Athanasios Litsios; Daphne H E W Huberts; Hanna M Terpstra; Paolo Guerra; Alexander Schmidt; Katarzyna Buczak; Alexandros Papagiannakis; Mattia Rovetta; Johan Hekelaar; Georg Hubmann; Marten Exterkate; Andreas Milias-Argeitis; Matthias Heinemann
Journal:  Nat Cell Biol       Date:  2019-11-04       Impact factor: 28.824

9.  Whi5 is diluted and protein synthesis does not dramatically increase in pre-Start G1.

Authors:  Kurt M Schmoller; Michael C Lanz; Jacob Kim; Mardo Koivomagi; Yimiao Qu; Chao Tang; Igor V Kukhtevich; Robert Schneider; Fabian Rudolf; David F Moreno; Martí Aldea; Rafael Lucena; Jan M Skotheim
Journal:  Mol Biol Cell       Date:  2022-05-01       Impact factor: 3.612

10.  G1/S transcription factors assemble in increasing numbers of discrete clusters through G1 phase.

Authors:  Labe Black; Sylvain Tollis; Guo Fu; Jean-Bernard Fiche; Savanna Dorsey; Jing Cheng; Ghada Ghazal; Stephen Notley; Benjamin Crevier; Jeremy Bigness; Marcelo Nollmann; Mike Tyers; Catherine Ann Royer
Journal:  J Cell Biol       Date:  2020-09-07       Impact factor: 10.539

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