Literature DB >> 32518113

Cell-size regulation in budding yeast does not depend on linear accumulation of Whi5.

Felix Barber1, Ariel Amir2, Andrew W Murray3,4.   

Abstract

Cells must couple cell-cycle progress to their growth rate to restrict the spread of cell sizes present throughout a population. Linear, rather than exponential, accumulation of Whi5, was proposed to provide this coordination by causing a higher Whi5 concentration in cells born at a smaller size. We tested this model using the inducible GAL1 promoter to make the Whi5 concentration independent of cell size. At an expression level that equalizes the mean cell size with that of wild-type cells, the size distributions of cells with galactose-induced Whi5 expression and wild-type cells are indistinguishable. Fluorescence microscopy confirms that the endogenous and GAL1 promoters produce different relationships between Whi5 concentration and cell volume without diminishing size control in the G1 phase. We also expressed Cln3 from the GAL1 promoter, finding that the spread in cell sizes for an asynchronous population is unaffected by this perturbation. Our findings indicate that size control in budding yeast does not fundamentally originate from the linear accumulation of Whi5, contradicting a previous claim and demonstrating the need for further models of cell-cycle regulation to explain how cell size controls passage through Start.

Entities:  

Keywords:  Start; Whi5; budding yeast; cell-size control; single-cell time-lapse microscopy

Year:  2020        PMID: 32518113      PMCID: PMC7321981          DOI: 10.1073/pnas.2001255117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

1.  CLN3 expression is sufficient to restore G1-to-S-phase progression in Saccharomyces cerevisiae mutants defective in translation initiation factor eIF4E.

Authors:  P Danaie; M Altmann; M N Hall; H Trachsel; S B Helliwell
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

2.  The effects of molecular noise and size control on variability in the budding yeast cell cycle.

Authors:  Stefano Di Talia; Jan M Skotheim; James M Bean; Eric D Siggia; Frederick R Cross
Journal:  Nature       Date:  2007-08-23       Impact factor: 49.962

Review 3.  Step by Step, Cell by Cell: Quantification of the Bacterial Cell Cycle.

Authors:  Matteo Osella; Sander J Tans; Marco Cosentino Lagomarsino
Journal:  Trends Microbiol       Date:  2017-01-13       Impact factor: 17.079

4.  The critical size is set at a single-cell level by growth rate to attain homeostasis and adaptation.

Authors:  Francisco Ferrezuelo; Neus Colomina; Alida Palmisano; Eloi Garí; Carme Gallego; Attila Csikász-Nagy; Martí Aldea
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

5.  Genetic analysis of the shared role of CLN3 and BCK2 at the G(1)-S transition in Saccharomyces cerevisiae.

Authors:  H Wijnen; B Futcher
Journal:  Genetics       Date:  1999-11       Impact factor: 4.562

Review 6.  Modeling Cell Size Regulation: From Single-Cell-Level Statistics to Molecular Mechanisms and Population-Level Effects.

Authors:  Po-Yi Ho; Jie Lin; Ariel Amir
Journal:  Annu Rev Biophys       Date:  2018-03-08       Impact factor: 12.981

7.  Archaeal cells share common size control with bacteria despite noisier growth and division.

Authors:  Ye-Jin Eun; Po-Yi Ho; Minjeong Kim; Salvatore LaRussa; Lydia Robert; Lars D Renner; Amy Schmid; Ethan Garner; Ariel Amir
Journal:  Nat Microbiol       Date:  2017-12-18       Impact factor: 17.745

8.  Cell Cycle Inhibitor Whi5 Records Environmental Information to Coordinate Growth and Division in Yeast.

Authors:  Yimiao Qu; Jun Jiang; Xiang Liu; Ping Wei; Xiaojing Yang; Chao Tang
Journal:  Cell Rep       Date:  2019-10-22       Impact factor: 9.423

9.  Bck2 is a phase-independent activator of cell cycle-regulated genes in yeast.

Authors:  Francisco Ferrezuelo; Martí Aldea; Bruce Futcher
Journal:  Cell Cycle       Date:  2009-01-15       Impact factor: 4.534

10.  Homeostasis of protein and mRNA concentrations in growing cells.

Authors:  Jie Lin; Ariel Amir
Journal:  Nat Commun       Date:  2018-10-29       Impact factor: 14.919

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  12 in total

1.  Cell-size control.

Authors:  Nicholas Rhind
Journal:  Curr Biol       Date:  2021-11-08       Impact factor: 10.834

2.  Growth-dependent signals drive an increase in early G1 cyclin concentration to link cell cycle entry with cell growth.

Authors:  Robert A Sommer; Jerry T DeWitt; Raymond Tan; Douglas R Kellogg
Journal:  Elife       Date:  2021-10-29       Impact factor: 8.140

3.  Transcriptional and chromatin-based partitioning mechanisms uncouple protein scaling from cell size.

Authors:  Matthew P Swaffer; Jacob Kim; Devon Chandler-Brown; Maurice Langhinrichs; Georgi K Marinov; William J Greenleaf; Anshul Kundaje; Kurt M Schmoller; Jan M Skotheim
Journal:  Mol Cell       Date:  2021-11-02       Impact factor: 17.970

4.  Cell region fingerprints enable highly precise single-cell tracking and lineage reconstruction.

Authors:  Andreas P Cuny; Aaron Ponti; Tomas Kündig; Fabian Rudolf; Jörg Stelling
Journal:  Nat Methods       Date:  2022-09-22       Impact factor: 47.990

5.  The G1/S repressor WHI5 is expressed at similar levels throughout the cell cycle.

Authors:  Sylvain Tollis
Journal:  BMC Res Notes       Date:  2022-07-15

6.  High-resolution mass measurements of single budding yeast reveal linear growth segments.

Authors:  Andreas P Cuny; K Tanuj Sapra; David Martinez-Martin; Gotthold Fläschner; Jonathan D Adams; Sascha Martin; Christoph Gerber; Fabian Rudolf; Daniel J Müller
Journal:  Nat Commun       Date:  2022-06-22       Impact factor: 17.694

7.  Whi5 is diluted and protein synthesis does not dramatically increase in pre-Start G1.

Authors:  Kurt M Schmoller; Michael C Lanz; Jacob Kim; Mardo Koivomagi; Yimiao Qu; Chao Tang; Igor V Kukhtevich; Robert Schneider; Fabian Rudolf; David F Moreno; Martí Aldea; Rafael Lucena; Jan M Skotheim
Journal:  Mol Biol Cell       Date:  2022-05-01       Impact factor: 3.612

8.  The microprotein Nrs1 rewires the G1/S transcriptional machinery during nitrogen limitation in budding yeast.

Authors:  Sylvain Tollis; Jaspal Singh; Roger Palou; Yogitha Thattikota; Ghada Ghazal; Jasmin Coulombe-Huntington; Xiaojing Tang; Susan Moore; Deborah Blake; Eric Bonneil; Catherine A Royer; Pierre Thibault; Mike Tyers
Journal:  PLoS Biol       Date:  2022-03-03       Impact factor: 8.029

Review 9.  Scaling gene expression for cell size control and senescence in Saccharomyces cerevisiae.

Authors:  Yuping Chen; Bruce Futcher
Journal:  Curr Genet       Date:  2020-11-05       Impact factor: 3.886

10.  Characterizing non-exponential growth and bimodal cell size distributions in fission yeast: An analytical approach.

Authors:  Chen Jia; Abhyudai Singh; Ramon Grima
Journal:  PLoS Comput Biol       Date:  2022-01-18       Impact factor: 4.475

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