Literature DB >> 29762030

Structure-Function Analysis of the Extended Conformation of a Polyketide Synthase Module.

Xiuyuan Li, Natalia Sevillano1, Florencia La Greca1, Lindsay Deis, Yu-Chen Liu, Marc C Deller2, Irimpan I Mathews2, Tsutomu Matsui2, David E Cane3, Charles S Craik1, Chaitan Khosla.   

Abstract

Catalytic modules of assembly-line polyketide synthases (PKSs) have previously been observed in two very different conformations-an "extended" architecture and an "arch-shaped" architecture-although the catalytic relevance of neither has been directly established. By the use of a fully human naïve antigen-binding fragment (Fab) library, a high-affinity antibody was identified that bound to the extended conformation of a PKS module, as verified by X-ray crystallography and tandem size-exclusion chromatography-small-angle X-ray scattering (SEC-SAXS). Kinetic analysis proved that this antibody-stabilized module conformation was fully competent for catalysis of intermodular polyketide chain translocation as well as intramodular polyketide chain elongation and functional group modification of a growing polyketide chain. Thus, the extended conformation of a PKS module is fully competent for all of its essential catalytic functions.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29762030      PMCID: PMC6484869          DOI: 10.1021/jacs.8b02100

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

Review 1.  The architectures of iterative type I PKS and FAS.

Authors:  Dominik A Herbst; Craig A Townsend; Timm Maier
Journal:  Nat Prod Rep       Date:  2018-10-17       Impact factor: 13.423

Review 2.  Why recombinant antibodies - benefits and applications.

Authors:  Koli Basu; Evan M Green; Yifan Cheng; Charles S Craik
Journal:  Curr Opin Biotechnol       Date:  2019-03-05       Impact factor: 9.740

3.  Mapping the catalytic conformations of an assembly-line polyketide synthase module.

Authors:  Dillon P Cogan; Kaiming Zhang; Xiuyuan Li; Shanshan Li; Grigore D Pintilie; Soung-Hun Roh; Charles S Craik; Wah Chiu; Chaitan Khosla
Journal:  Science       Date:  2021-11-04       Impact factor: 47.728

4.  Modular polyketide synthase contains two reaction chambers that operate asynchronously.

Authors:  Saket R Bagde; Irimpan I Mathews; J Christopher Fromme; Chu-Young Kim
Journal:  Science       Date:  2021-11-04       Impact factor: 47.728

5.  De Novo Design and Implementation of a Tandem Acyl Carrier Protein Domain in a Type I Modular Polyketide Synthase.

Authors:  Zilong Wang; Saket R Bagde; Gerardo Zavala; Tsutomu Matsui; Xi Chen; Chu-Young Kim
Journal:  ACS Chem Biol       Date:  2018-10-24       Impact factor: 5.100

6.  Discovery and Characterization of a Thioesterase-Specific Monoclonal Antibody That Recognizes the 6-Deoxyerythronolide B Synthase.

Authors:  Xiuyuan Li; Natalia Sevillano; Florencia La Greca; Jake Hsu; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla
Journal:  Biochemistry       Date:  2018-10-17       Impact factor: 3.162

Review 7.  Synthetic biology enabling access to designer polyketides.

Authors:  Alexandra A Malico; Lindsay Nichols; Gavin J Williams
Journal:  Curr Opin Chem Biol       Date:  2020-08-04       Impact factor: 8.822

8.  Engineering of Chimeric Polyketide Synthases Using SYNZIP Docking Domains.

Authors:  Maja Klaus; Alicia D D'Souza; Aleksandra Nivina; Chaitan Khosla; Martin Grininger
Journal:  ACS Chem Biol       Date:  2019-02-11       Impact factor: 5.100

Review 9.  Protein-protein interactions in "cis-AT" polyketide synthases.

Authors:  Greg J Dodge; Finn P Maloney; Janet L Smith
Journal:  Nat Prod Rep       Date:  2018-10-17       Impact factor: 13.423

10.  Antibody Probes of Module 1 of the 6-Deoxyerythronolide B Synthase Reveal an Extended Conformation During Ketoreduction.

Authors:  Dillon P Cogan; Xiuyuan Li; Natalia Sevillano; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla
Journal:  J Am Chem Soc       Date:  2020-08-18       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.