Literature DB >> 30188553

Protein-protein interactions in "cis-AT" polyketide synthases.

Greg J Dodge1, Finn P Maloney, Janet L Smith.   

Abstract

Covering: up to the end of 2018 Polyketides are a valuable source of bioactive and clinically important molecules. The biosynthesis of these chemically complex molecules has led to the discovery of equally complex polyketide synthase (PKS) pathways. Crystallography has yielded snapshots of individual catalytic domains, di-domains, and multi-domains from a variety of PKS megasynthases, and cryo-EM studies have provided initial views of a PKS module in a series of defined biochemical states. Here, we review the structural and biochemical results that shed light on the protein-protein interactions critical to catalysis by PKS systems with an embedded acyltransferase. Interactions include those that occur both within and between PKS modules, as well as with accessory enzymes.

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Year:  2018        PMID: 30188553      PMCID: PMC6207950          DOI: 10.1039/c8np00058a

Source DB:  PubMed          Journal:  Nat Prod Rep        ISSN: 0265-0568            Impact factor:   13.423


  97 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

2.  The structure of docking domains in modular polyketide synthases.

Authors:  R William Broadhurst; Daniel Nietlispach; Michael P Wheatcroft; Peter F Leadlay; Kira J Weissman
Journal:  Chem Biol       Date:  2003-08

3.  Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.

Authors:  Akimasa Miyanaga; Shohei Iwasawa; Yuji Shinohara; Fumitaka Kudo; Tadashi Eguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

4.  Polyketide β-branching in bryostatin biosynthesis: identification of surrogate acetyl-ACP donors for BryR, an HMG-ACP synthase.

Authors:  Tonia J Buchholz; Christopher M Rath; Nicole B Lopanik; Noah P Gardner; Kristina Håkansson; David H Sherman
Journal:  Chem Biol       Date:  2010-10-29

5.  Tandemly duplicated acyl carrier proteins, which increase polyketide antibiotic production, can apparently function either in parallel or in series.

Authors:  Ayesha S Rahman; Joanne Hothersall; John Crosby; Thomas J Simpson; Christopher M Thomas
Journal:  J Biol Chem       Date:  2004-12-06       Impact factor: 5.157

6.  Evidence for two catalytically independent clusters of active sites in a functional modular polyketide synthase.

Authors:  C M Kao; R Pieper; D E Cane; C Khosla
Journal:  Biochemistry       Date:  1996-09-24       Impact factor: 3.162

7.  Cofactor-induced conformational rearrangements establish a catalytically competent active site and a proton relay conduit in FabG.

Authors:  Allen C Price; Yong-Mei Zhang; Charles O Rock; Stephen W White
Journal:  Structure       Date:  2004-03       Impact factor: 5.006

8.  Structural Basis for Cyclopropanation by a Unique Enoyl-Acyl Carrier Protein Reductase.

Authors:  Dheeraj Khare; Wendi A Hale; Ashootosh Tripathi; Liangcai Gu; David H Sherman; William H Gerwick; Kristina Håkansson; Janet L Smith
Journal:  Structure       Date:  2015-10-29       Impact factor: 5.006

9.  Cyanobacterial polyketide synthase docking domains: a tool for engineering natural product biosynthesis.

Authors:  Jonathan R Whicher; Sarah S Smaga; Douglas A Hansen; William C Brown; William H Gerwick; David H Sherman; Janet L Smith
Journal:  Chem Biol       Date:  2013-10-31

10.  Divergence of multimodular polyketide synthases revealed by a didomain structure.

Authors:  Jianting Zheng; Darren C Gay; Borries Demeler; Mark A White; Adrian T Keatinge-Clay
Journal:  Nat Chem Biol       Date:  2012-05-27       Impact factor: 15.040

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  6 in total

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Authors:  Dillon P Cogan; Xiuyuan Li; Natalia Sevillano; Irimpan I Mathews; Tsutomu Matsui; Charles S Craik; Chaitan Khosla
Journal:  J Am Chem Soc       Date:  2020-08-18       Impact factor: 15.419

Review 2.  Engineering enzymatic assembly lines to produce new antibiotics.

Authors:  Kenan Aj Bozhüyük; Jason Micklefield; Barrie Wilkinson
Journal:  Curr Opin Microbiol       Date:  2019-11-16       Impact factor: 7.934

3.  Evolution and Diversity of Assembly-Line Polyketide Synthases.

Authors:  Aleksandra Nivina; Kai P Yuet; Jake Hsu; Chaitan Khosla
Journal:  Chem Rev       Date:  2019-12-15       Impact factor: 60.622

Review 4.  Docking domain-mediated subunit interactions in natural product megasynth(et)ases.

Authors:  Helen G Smith; Matthew J Beech; Józef R Lewandowski; Gregory L Challis; Matthew Jenner
Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

5.  Metabolic pathway assembly using docking domains from type I cis-AT polyketide synthases.

Authors:  Xixi Sun; Yujie Yuan; Qitong Chen; Shiqi Nie; Jiaxuan Guo; Zutian Ou; Min Huang; Zixin Deng; Tiangang Liu; Tian Ma
Journal:  Nat Commun       Date:  2022-09-21       Impact factor: 17.694

6.  The structure of a polyketide synthase bimodule core.

Authors:  Yves U Tittes; Dominik A Herbst; Solène F X Martin; Hugo Munoz-Hernandez; Roman P Jakob; Timm Maier
Journal:  Sci Adv       Date:  2022-09-21       Impact factor: 14.957

  6 in total

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