Literature DB >> 29760975

High-throughput intensity diffraction tomography with a computational microscope.

Ruilong Ling1, Waleed Tahir1, Hsing-Ying Lin2,3, Hakho Lee2,3, Lei Tian1.   

Abstract

We demonstrate a motion-free intensity diffraction tomography technique that enables the direct inversion of 3D phase and absorption from intensity-only measurements for weakly scattering samples. We derive a novel linear forward model featuring slice-wise phase and absorption transfer functions using angled illumination. This new framework facilitates flexible and efficient data acquisition, enabling arbitrary sampling of the illumination angles. The reconstruction algorithm performs 3D synthetic aperture using a robust computation and memory efficient slice-wise deconvolution to achieve resolution up to the incoherent limit. We demonstrate our technique with thick biological samples having both sparse 3D structures and dense cell clusters. We further investigate the limitation of our technique when imaging strongly scattering samples. Imaging performance and the influence of multiple scattering is evaluated using a 3D sample consisting of stacked phase and absorption resolution targets. This computational microscopy system is directly built on a standard commercial microscope with a simple LED array source add-on, and promises broad applications by leveraging the ubiquitous microscopy platforms with minimal hardware modifications.

Keywords:  (100.5070) Phase retrieval; (110.1758) Computational imaging; (170.6900) Three-dimensional microscopy

Year:  2018        PMID: 29760975      PMCID: PMC5946776          DOI: 10.1364/BOE.9.002130

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  33 in total

1.  Spherical-wave intensity diffraction tomography.

Authors:  Greg Gbur; Mark A Anastasio; Yin Huang; Daxin Shi
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2005-02       Impact factor: 2.129

2.  Cell refractive index tomography by digital holographic microscopy.

Authors:  Florian Charrière; Anca Marian; Frédéric Montfort; Jonas Kuehn; Tristan Colomb; Etienne Cuche; Pierre Marquet; Christian Depeursinge
Journal:  Opt Lett       Date:  2006-01-15       Impact factor: 3.776

3.  Validity of diffraction tomography based on the first born and the first rytov approximations.

Authors:  B Chen; J J Stamnes
Journal:  Appl Opt       Date:  1998-05-10       Impact factor: 1.980

4.  Tomographic phase microscopy.

Authors:  Wonshik Choi; Christopher Fang-Yen; Kamran Badizadegan; Seungeun Oh; Niyom Lue; Ramachandra R Dasari; Michael S Feld
Journal:  Nat Methods       Date:  2007-08-12       Impact factor: 28.547

5.  Synthetic Fourier transform light scattering.

Authors:  Kyeoreh Lee; Hyeon-Don Kim; Kyoohyun Kim; Youngchan Kim; Timothy R Hillman; Bumki Min; Yongkeun Park
Journal:  Opt Express       Date:  2013-09-23       Impact factor: 3.894

6.  Synthetic aperture tomographic phase microscopy for 3D imaging of live cells in translational motion.

Authors:  Niyom Lue; Wonshik Choi; Gabriel Popescu; Kamran Badizadegan; Ramachandra R Dasari; Michael S Feld
Journal:  Opt Express       Date:  2008-09-29       Impact factor: 3.894

7.  Tomographic phase microscopy with 180° rotation of live cells in suspension by holographic optical tweezers.

Authors:  Mor Habaza; Barak Gilboa; Yael Roichman; Natan T Shaked
Journal:  Opt Lett       Date:  2015-04-15       Impact factor: 3.776

8.  Diffraction tomography with Fourier ptychography.

Authors:  Roarke Horstmeyer; Jaebum Chung; Xiaoze Ou; Guoan Zheng; Changhuei Yang
Journal:  Optica       Date:  2016-07-27       Impact factor: 11.104

9.  Enhanced 3D spatial resolution in quantitative phase microscopy using spatially incoherent illumination.

Authors:  Pierre Bon; Sherazade Aknoun; Serge Monneret; Benoit Wattellier
Journal:  Opt Express       Date:  2014-04-07       Impact factor: 3.894

10.  Wide-field, high-resolution Fourier ptychographic microscopy.

Authors:  Guoan Zheng; Roarke Horstmeyer; Changhuei Yang
Journal:  Nat Photonics       Date:  2013-09-01       Impact factor: 38.771

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  8 in total

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Authors:  Kevin C Zhou; Roarke Horstmeyer
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3.  High-throughput, volumetric quantitative phase imaging with multiplexed intensity diffraction tomography.

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Journal:  Biomed Opt Express       Date:  2019-11-22       Impact factor: 3.732

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5.  Transport of intensity diffraction tomography with non-interferometric synthetic aperture for three-dimensional label-free microscopy.

Authors:  Jiaji Li; Ning Zhou; Jiasong Sun; Shun Zhou; Zhidong Bai; Linpeng Lu; Qian Chen; Chao Zuo
Journal:  Light Sci Appl       Date:  2022-06-02       Impact factor: 20.257

6.  LED array reflectance microscopy for scattering-based multi-contrast imaging.

Authors:  Weiye Song; Alex Matlock; Sipei Fu; Xiaodan Qin; Hui Feng; Christopher V Gabel; Lei Tian; Ji Yi
Journal:  Opt Lett       Date:  2020-04-01       Impact factor: 3.776

7.  Inverse scattering for reflection intensity phase microscopy.

Authors:  Alex Matlock; Anne Sentenac; Patrick C Chaumet; Ji Yi; Lei Tian
Journal:  Biomed Opt Express       Date:  2020-01-14       Impact factor: 3.562

8.  Single-cell cytometry via multiplexed fluorescence prediction by label-free reflectance microscopy.

Authors:  Shiyi Cheng; Sipei Fu; Yumi Mun Kim; Weiye Song; Yunzhe Li; Yujia Xue; Ji Yi; Lei Tian
Journal:  Sci Adv       Date:  2021-01-15       Impact factor: 14.136

  8 in total

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