Literature DB >> 2974801

Isolation and characterization of unusual gin mutants.

A Klippel1, K Cloppenborg, R Kahmann.   

Abstract

Site-specific inversion of the G segment in phage Mu DNA is promoted by two proteins, the DNA invertase Gin and the host factor FIS. Recombination occurs if the recombination sites (IR) are arranged as inverted repeats and a recombinational enhancer sequence is present in cis. Intermolecular reactions as well as deletions between direct repeats of the IRs rarely occur. Making use of a fis- mutant of Escherichia coli we have devised a scheme to isolate gin mutants that have a FIS independent phenotype. This mutant phenotype is caused by single amino acid changes at five different positions of gin. The mutant proteins display a whole set of new properties in vivo: they promote inversions, deletions and intermolecular recombination in an enhancer- and FIS-independent manner. The mutants differ in recombination activity. The most active mutant protein was analysed in vitro. The loss of site orientation specificity was accompanied with the ability to recombine even linear substrates. We discuss these results in connection with the role of the enhancer and FIS protein in the wild-type situation.

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Year:  1988        PMID: 2974801      PMCID: PMC455002          DOI: 10.1002/j.1460-2075.1988.tb03286.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  IDENTIFICATION OF THE ALTERED BASES IN MUTATED SINGLE-STRANDED DNA. I. IN VITRO MUTAGENESIS BY HYDROXYLAMINE, ETHYL METHANESULFONATE AND NITROUS ACID.

Authors:  I TESSMAN; R K PODDAR; S KUMAR
Journal:  J Mol Biol       Date:  1964-08       Impact factor: 5.469

2.  Systematic method for the detection of potential lambda Cro-like DNA-binding regions in proteins.

Authors:  I B Dodd; J B Egan
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

3.  Transposon-mediated site-specific recombination in vitro: DNA cleavage and protein-DNA linkage at the recombination site.

Authors:  R R Reed; N D Grindley
Journal:  Cell       Date:  1981-09       Impact factor: 41.582

4.  Inversion of the G DNA segment of phage Mu controls phage infectivity.

Authors:  D Kamp; R Kahmann; D Zipser; T R Broker; L T Chow
Journal:  Nature       Date:  1978-02-09       Impact factor: 49.962

5.  The relationship of two invertible segments in bacteriophage Mu and Salmonella typhimurium DNA.

Authors:  D Kamp; R Kahmann
Journal:  Mol Gen Genet       Date:  1981

6.  Site-specific genetic recombination promoted by the FLP protein of the yeast 2-micron plasmid in vitro.

Authors:  L Meyer-Leon; J F Senecoff; R C Bruckner; M M Cox
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1984

7.  DNA inversion in bacteriophage Mu: characterization of the inversion site.

Authors:  R Schmucker; W Ritthaler; B Stern; D Kamp
Journal:  J Gen Virol       Date:  1986-06       Impact factor: 3.891

8.  The DNA invertase Gin of phage Mu: formation of a covalent complex with DNA via a phosphoserine at amino acid position 9.

Authors:  A Klippel; G Mertens; T Patschinsky; R Kahmann
Journal:  EMBO J       Date:  1988-04       Impact factor: 11.598

9.  Site-specific recombination in bacteriophage Mu: characterization of binding sites for the DNA invertase Gin.

Authors:  G Mertens; A Klippel; H Fuss; H Blöcker; R Frank; R Kahmann
Journal:  EMBO J       Date:  1988-04       Impact factor: 11.598

10.  A site-specific, conservative recombination system carried by bacteriophage P1. Mapping the recombinase gene cin and the cross-over sites cix for the inversion of the C segment.

Authors:  S Iida; J Meyer; K E Kennedy; W Arber
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  48 in total

1.  Synapsis and strand exchange in the resolution and DNA inversion reactions catalysed by the beta recombinase.

Authors:  Inés Canosa; Gema López; Fernando Rojo; Martin R Boocock; Juan C Alonso
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

2.  DNA supercoiling enables the type IIS restriction enzyme BspMI to recognise the relative orientation of two DNA sequences.

Authors:  Isabel J Kingston; Niall A Gormley; Stephen E Halford
Journal:  Nucleic Acids Res       Date:  2003-09-15       Impact factor: 16.971

3.  Structure-guided reprogramming of serine recombinase DNA sequence specificity.

Authors:  Thomas Gaj; Andrew C Mercer; Charles A Gersbach; Russell M Gordley; Carlos F Barbas
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

4.  Enhancer-independent Mu transposition from two topologically distinct synapses.

Authors:  Zhiqi Yin; Rasika M Harshey
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-27       Impact factor: 11.205

5.  Implications of structures of synaptic tetramers of gamma delta resolvase for the mechanism of recombination.

Authors:  Satwik Kamtekar; Roger S Ho; Melanie J Cocco; Weikai Li; Sandra V C T Wenwieser; Martin R Boocock; Nigel D F Grindley; Thomas A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-28       Impact factor: 11.205

6.  The N-terminal part of the E.coli DNA binding protein FIS is essential for stimulating site-specific DNA inversion but is not required for specific DNA binding.

Authors:  C Koch; O Ninnemann; H Fuss; R Kahmann
Journal:  Nucleic Acids Res       Date:  1991-11-11       Impact factor: 16.971

7.  Synthesis of programmable integrases.

Authors:  Russell M Gordley; Charles A Gersbach; Carlos F Barbas
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-12       Impact factor: 11.205

8.  Arginine as a general acid catalyst in serine recombinase-mediated DNA cleavage.

Authors:  Ross A Keenholtz; Kent W Mouw; Martin R Boocock; Nan-Sheng Li; Joseph A Piccirilli; Phoebe A Rice
Journal:  J Biol Chem       Date:  2013-08-22       Impact factor: 5.157

9.  Plasmid-borne cadmium resistance genes in Listeria monocytogenes are present on Tn5422, a novel transposon closely related to Tn917.

Authors:  M Lebrun; A Audurier; P Cossart
Journal:  J Bacteriol       Date:  1994-05       Impact factor: 3.490

10.  In vivo analysis of the plasmid pAM beta 1 resolution system.

Authors:  L Jannière; S McGovern; C Pujol; M A Petit; S D Ehrlich
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971

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