Literature DB >> 29735552

HLA Class I and II Diversity Contributes to the Etiologic Heterogeneity of Non-Hodgkin Lymphoma Subtypes.

Sophia S Wang1, Mary Carrington2, Sonja I Berndt3, Susan L Slager4, Paige M Bracci5, Jenna Voutsinas6, James R Cerhan4, Karin E Smedby7,8, Henrik Hjalgrim9,10, Joseph Vijai11, Lindsay M Morton3, Roel Vermeulen12,13, Ora Paltiel14, Claire M Vajdic15, Martha S Linet3, Alexandra Nieters16, Silvia de Sanjose17,18, Wendy Cozen19, Elizabeth E Brown20, Jennifer Turner21,22, John J Spinelli23,24, Tongzhang Zheng25, Brenda M Birmann26, Christopher R Flowers27, Nikolaus Becker28, Elizabeth A Holly5, Eleanor Kane29, Dennis Weisenburger30, Marc Maynadie31, Pierluigi Cocco32, Demetrius Albanes3, Stephanie J Weinstein3, Lauren R Teras33, W Ryan Diver33, Stephanie J Lax29, Ruth C Travis34, Rudolph Kaaks28, Elio Riboli35, Yolanda Benavente17,18, Paul Brennan36, James McKay37, Marie-Hélène Delfau-Larue37,38, Brian K Link39, Corrado Magnani40, Maria Grazia Ennas41, Giancarlo Latte42, Andrew L Feldman43, Nicole Wong Doo44, Graham G Giles44,45, Melissa C Southey46, Roger L Milne44,45, Kenneth Offit10, Jacob Musinsky10, Alan A Arslan47,48,49, Mark P Purdue3, Hans-Olov Adami50, Mads Melbye9,51, Bengt Glimelius52, Lucia Conde53, Nicola J Camp54, Martha Glenn54, Karen Curtin54, Jacqueline Clavel55,56, Alain Monnereau56,56,57, David G Cox58, Hervé Ghesquières56,59, Gilles Salles59,60, Paulo Bofetta61, Lenka Foretova62, Anthony Staines63, Scott Davis64, Richard K Severson65, Qing Lan3, Angela Brooks-Wilson66,67, Martyn T Smith68, Eve Roman29, Anne Kricker69, Yawei Zhang70,71, Peter Kraft72,73, Stephen J Chanock3, Nathaniel Rothman3, Patricia Hartge3, Christine F Skibola27.   

Abstract

A growing number of loci within the human leukocyte antigen (HLA) region have been implicated in non-Hodgkin lymphoma (NHL) etiology. Here, we test a complementary hypothesis of "heterozygote advantage" regarding the role of HLA and NHL, whereby HLA diversity is beneficial and homozygous HLA loci are associated with increased disease risk. HLA alleles at class I and II loci were imputed from genome-wide association studies (GWAS) using SNP2HLA for 3,617 diffuse large B-cell lymphomas (DLBCL), 2,686 follicular lymphomas (FL), 2,878 chronic lymphocytic leukemia/small lymphocytic lymphomas (CLL/SLL), 741 marginal zone lymphomas (MZL), and 8,753 controls of European descent. Both DLBCL and MZL risk were elevated with homozygosity at class I HLA-B and -C loci (OR DLBCL = 1.31, 95% CI = 1.06-1.60; OR MZL = 1.45, 95% CI = 1.12-1.89) and class II HLA-DRB1 locus (OR DLBCL = 2.10, 95% CI = 1.24-3.55; OR MZL = 2.10, 95% CI = 0.99-4.45). Increased FL risk was observed with the overall increase in number of homozygous HLA class II loci (P trend < 0.0001, FDR = 0.0005). These results support a role for HLA zygosity in NHL etiology and suggests that distinct immune pathways may underly the etiology of the different NHL subtypes.Significance: HLA gene diversity reduces risk for non-Hodgkin lymphoma. Cancer Res; 78(14); 4086-96. ©2018 AACR. ©2018 American Association for Cancer Research.

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Year:  2018        PMID: 29735552      PMCID: PMC6065509          DOI: 10.1158/0008-5472.CAN-17-2900

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   13.312


  24 in total

1.  Proposed classification of lymphoid neoplasms for epidemiologic research from the Pathology Working Group of the International Lymphoma Epidemiology Consortium (InterLymph).

Authors:  Lindsay M Morton; Jennifer J Turner; James R Cerhan; Martha S Linet; Patrick A Treseler; Christina A Clarke; Andrew Jack; Wendy Cozen; Marc Maynadié; John J Spinelli; Adele Seniori Costantini; Thomas Rüdiger; Aldo Scarpa; Tongzhang Zheng; Dennis D Weisenburger
Journal:  Blood       Date:  2007-03-27       Impact factor: 22.113

2.  HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage.

Authors:  M Carrington; G W Nelson; M P Martin; T Kissner; D Vlahov; J J Goedert; R Kaslow; S Buchbinder; K Hoots; S J O'Brien
Journal:  Science       Date:  1999-03-12       Impact factor: 47.728

3.  Comprehensive Evaluation of Medical Conditions Associated with Risk of Non-Hodgkin Lymphoma using Medicare Claims ("MedWAS").

Authors:  Eric A Engels; Ruth Parsons; Caroline Besson; Lindsay M Morton; Lindsey Enewold; Winnie Ricker; Elizabeth L Yanik; Hannah Arem; April A Austin; Ruth M Pfeiffer
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2016-04-26       Impact factor: 4.254

4.  Etiologic heterogeneity among non-Hodgkin lymphoma subtypes.

Authors:  Lindsay M Morton; Sophia S Wang; Wendy Cozen; Martha S Linet; Nilanjan Chatterjee; Scott Davis; Richard K Severson; Joanne S Colt; Mohammad A Vasef; Nathaniel Rothman; Aaron Blair; Leslie Bernstein; Amanda J Cross; Anneclaire J De Roos; Eric A Engels; David W Hein; Deirdre A Hill; Linda E Kelemen; Unhee Lim; Charles F Lynch; Maryjean Schenk; Sholom Wacholder; Mary H Ward; Shelia Hoar Zahm; Stephen J Chanock; James R Cerhan; Patricia Hartge
Journal:  Blood       Date:  2008-09-16       Impact factor: 22.113

5.  Genome-wide association study identifies five susceptibility loci for follicular lymphoma outside the HLA region.

Authors:  Christine F Skibola; Sonja I Berndt; Joseph Vijai; Lucia Conde; Zhaoming Wang; Meredith Yeager; Paul I W de Bakker; Brenda M Birmann; Claire M Vajdic; Jia-Nee Foo; Paige M Bracci; Roel C H Vermeulen; Susan L Slager; Silvia de Sanjose; Sophia S Wang; Martha S Linet; Gilles Salles; Qing Lan; Gianluca Severi; Henrik Hjalgrim; Tracy Lightfoot; Mads Melbye; Jian Gu; Hervé Ghesquières; Brian K Link; Lindsay M Morton; Elizabeth A Holly; Alex Smith; Lesley F Tinker; Lauren R Teras; Anne Kricker; Nikolaus Becker; Mark P Purdue; John J Spinelli; Yawei Zhang; Graham G Giles; Paolo Vineis; Alain Monnereau; Kimberly A Bertrand; Demetrius Albanes; Anne Zeleniuch-Jacquotte; Attilio Gabbas; Charles C Chung; Laurie Burdett; Amy Hutchinson; Charles Lawrence; Rebecca Montalvan; Liming Liang; Jinyan Huang; Baoshan Ma; Jianjun Liu; Hans-Olov Adami; Bengt Glimelius; Yuanqing Ye; Grzegorz S Nowakowski; Ahmet Dogan; Carrie A Thompson; Thomas M Habermann; Anne J Novak; Mark Liebow; Thomas E Witzig; George J Weiner; Maryjean Schenk; Patricia Hartge; Anneclaire J De Roos; Wendy Cozen; Degui Zhi; Nicholas K Akers; Jacques Riby; Martyn T Smith; Mortimer Lacher; Danylo J Villano; Ann Maria; Eve Roman; Eleanor Kane; Rebecca D Jackson; Kari E North; W Ryan Diver; Jenny Turner; Bruce K Armstrong; Yolanda Benavente; Paolo Boffetta; Paul Brennan; Lenka Foretova; Marc Maynadie; Anthony Staines; James McKay; Angela R Brooks-Wilson; Tongzhang Zheng; Theodore R Holford; Saioa Chamosa; Rudolph Kaaks; Rachel S Kelly; Bodil Ohlsson; Ruth C Travis; Elisabete Weiderpass; Jacqueline Clavel; Edward Giovannucci; Peter Kraft; Jarmo Virtamo; Patrizio Mazza; Pierluigi Cocco; Maria Grazia Ennas; Brian C H Chiu; Joseph F Fraumeni; Alexandra Nieters; Kenneth Offit; Xifeng Wu; James R Cerhan; Karin E Smedby; Stephen J Chanock; Nathaniel Rothman
Journal:  Am J Hum Genet       Date:  2014-10-02       Impact factor: 11.043

6.  Origin of B-Cell Neoplasms in Autoimmune Disease.

Authors:  Kari Hemminki; Xiangdong Liu; Jianguang Ji; Asta Försti
Journal:  PLoS One       Date:  2016-06-29       Impact factor: 3.240

7.  A limit to the divergent allele advantage model supported by variable pathogen recognition across HLA-DRB1 allele lineages.

Authors:  Q Lau; Y Yasukochi; Y Satta
Journal:  Tissue Antigens       Date:  2015-09-22

Review 8.  The MHC locus and genetic susceptibility to autoimmune and infectious diseases.

Authors:  Vasiliki Matzaraki; Vinod Kumar; Cisca Wijmenga; Alexandra Zhernakova
Journal:  Genome Biol       Date:  2017-04-27       Impact factor: 13.583

9.  A genome-wide association study of marginal zone lymphoma shows association to the HLA region.

Authors:  Joseph Vijai; Zhaoming Wang; Sonja I Berndt; Christine F Skibola; Susan L Slager; Silvia de Sanjose; Mads Melbye; Bengt Glimelius; Paige M Bracci; Lucia Conde; Brenda M Birmann; Sophia S Wang; Angela R Brooks-Wilson; Qing Lan; Paul I W de Bakker; Roel C H Vermeulen; Carol Portlock; Stephen M Ansell; Brian K Link; Jacques Riby; Kari E North; Jian Gu; Henrik Hjalgrim; Wendy Cozen; Nikolaus Becker; Lauren R Teras; John J Spinelli; Jenny Turner; Yawei Zhang; Mark P Purdue; Graham G Giles; Rachel S Kelly; Anne Zeleniuch-Jacquotte; Maria Grazia Ennas; Alain Monnereau; Kimberly A Bertrand; Demetrius Albanes; Tracy Lightfoot; Meredith Yeager; Charles C Chung; Laurie Burdett; Amy Hutchinson; Charles Lawrence; Rebecca Montalvan; Liming Liang; Jinyan Huang; Baoshan Ma; Danylo J Villano; Ann Maria; Marina Corines; Tinu Thomas; Anne J Novak; Ahmet Dogan; Mark Liebow; Carrie A Thompson; Thomas E Witzig; Thomas M Habermann; George J Weiner; Martyn T Smith; Elizabeth A Holly; Rebecca D Jackson; Lesley F Tinker; Yuanqing Ye; Hans-Olov Adami; Karin E Smedby; Anneclaire J De Roos; Patricia Hartge; Lindsay M Morton; Richard K Severson; Yolanda Benavente; Paolo Boffetta; Paul Brennan; Lenka Foretova; Marc Maynadie; James McKay; Anthony Staines; W Ryan Diver; Claire M Vajdic; Bruce K Armstrong; Anne Kricker; Tongzhang Zheng; Theodore R Holford; Gianluca Severi; Paolo Vineis; Giovanni M Ferri; Rosalia Ricco; Lucia Miligi; Jacqueline Clavel; Edward Giovannucci; Peter Kraft; Jarmo Virtamo; Alex Smith; Eleanor Kane; Eve Roman; Brian C H Chiu; Joseph F Fraumeni; Xifeng Wu; James R Cerhan; Kenneth Offit; Stephen J Chanock; Nathaniel Rothman; Alexandra Nieters
Journal:  Nat Commun       Date:  2015-01-08       Impact factor: 17.694

10.  Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia.

Authors:  Sonja I Berndt; Nicola J Camp; Christine F Skibola; Joseph Vijai; Zhaoming Wang; Jian Gu; Alexandra Nieters; Rachel S Kelly; Karin E Smedby; Alain Monnereau; Wendy Cozen; Angela Cox; Sophia S Wang; Qing Lan; Lauren R Teras; Moara Machado; Meredith Yeager; Angela R Brooks-Wilson; Patricia Hartge; Mark P Purdue; Brenda M Birmann; Claire M Vajdic; Pierluigi Cocco; Yawei Zhang; Graham G Giles; Anne Zeleniuch-Jacquotte; Charles Lawrence; Rebecca Montalvan; Laurie Burdett; Amy Hutchinson; Yuanqing Ye; Timothy G Call; Tait D Shanafelt; Anne J Novak; Neil E Kay; Mark Liebow; Julie M Cunningham; Cristine Allmer; Henrik Hjalgrim; Hans-Olov Adami; Mads Melbye; Bengt Glimelius; Ellen T Chang; Martha Glenn; Karen Curtin; Lisa A Cannon-Albright; W Ryan Diver; Brian K Link; George J Weiner; Lucia Conde; Paige M Bracci; Jacques Riby; Donna K Arnett; Degui Zhi; Justin M Leach; Elizabeth A Holly; Rebecca D Jackson; Lesley F Tinker; Yolanda Benavente; Núria Sala; Delphine Casabonne; Nikolaus Becker; Paolo Boffetta; Paul Brennan; Lenka Foretova; Marc Maynadie; James McKay; Anthony Staines; Kari G Chaffee; Sara J Achenbach; Celine M Vachon; Lynn R Goldin; Sara S Strom; Jose F Leis; J Brice Weinberg; Neil E Caporaso; Aaron D Norman; Anneclaire J De Roos; Lindsay M Morton; Richard K Severson; Elio Riboli; Paolo Vineis; Rudolph Kaaks; Giovanna Masala; Elisabete Weiderpass; María-Dolores Chirlaque; Roel C H Vermeulen; Ruth C Travis; Melissa C Southey; Roger L Milne; Demetrius Albanes; Jarmo Virtamo; Stephanie Weinstein; Jacqueline Clavel; Tongzhang Zheng; Theodore R Holford; Danylo J Villano; Ann Maria; John J Spinelli; Randy D Gascoyne; Joseph M Connors; Kimberly A Bertrand; Edward Giovannucci; Peter Kraft; Anne Kricker; Jenny Turner; Maria Grazia Ennas; Giovanni M Ferri; Lucia Miligi; Liming Liang; Baoshan Ma; Jinyan Huang; Simon Crouch; Ju-Hyun Park; Nilanjan Chatterjee; Kari E North; John A Snowden; Josh Wright; Joseph F Fraumeni; Kenneth Offit; Xifeng Wu; Silvia de Sanjose; James R Cerhan; Stephen J Chanock; Nathaniel Rothman; Susan L Slager
Journal:  Nat Commun       Date:  2016-03-09       Impact factor: 17.694

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  11 in total

1.  The association between HLA and non-Hodgkin lymphoma subtypes, among a transplant-indicated population.

Authors:  Charlie Zhong; Loren Gragert; Martin Maiers; Brian T Hill; Jean Garcia-Gomez; Ketevan Gendzekhadze; David Senitzer; Joo Song; Dennis Weisenburger; Leanne Goldstein; Sophia S Wang
Journal:  Leuk Lymphoma       Date:  2019-06-19

2.  Epidemiology of Marginal Zone Lymphoma.

Authors:  James R Cerhan; Thomas M Habermann
Journal:  Ann Lymphoma       Date:  2021-03-30

3.  Genome-wide Screens Identify Lineage- and Tumor-Specific Genes Modulating MHC-I- and MHC-II-Restricted Immunosurveillance of Human Lymphomas.

Authors:  Devin Dersh; James D Phelan; Megan E Gumina; Boya Wang; Jesse H Arbuckle; Jaroslav Holly; Rigel J Kishton; Tovah E Markowitz; Mina O Seedhom; Nathan Fridlyand; George W Wright; Da Wei Huang; Michele Ceribelli; Craig J Thomas; Justin B Lack; Nicholas P Restifo; Thomas M Kristie; Louis M Staudt; Jonathan W Yewdell
Journal:  Immunity       Date:  2020-12-02       Impact factor: 31.745

4.  Genome-wide homozygosity and risk of four non-Hodgkin lymphoma subtypes.

Authors:  Amy Moore; Mitchell J Machiela; Moara Machado; Sophia S Wang; Eleanor Kane; Susan L Slager; Weiyin Zhou; Mary Carrington; Qing Lan; Roger L Milne; Brenda M Birmann; Hans-Olov Adami; Demetrius Albanes; Alan A Arslan; Nikolaus Becker; Yolanda Benavente; Simonetta Bisanzi; Paolo Boffetta; Paige M Bracci; Paul Brennan; Angela R Brooks-Wilson; Federico Canzian; Neil Caporaso; Jacqueline Clavel; Pierluigi Cocco; Lucia Conde; David G Cox; Wendy Cozen; Karen Curtin; Immaculata De Vivo; Silvia de Sanjose; Lenka Foretova; Susan M Gapstur; Hervè Ghesquières; Graham G Giles; Martha Glenn; Bengt Glimelius; Chi Gao; Thomas M Habermann; Henrik Hjalgrim; Rebecca D Jackson; Mark Liebow; Brian K Link; Marc Maynadie; James McKay; Mads Melbye; Lucia Miligi; Thierry J Molina; Alain Monnereau; Alexandra Nieters; Kari E North; Kenneth Offit; Alpa V Patel; Sara Piro; Vignesh Ravichandran; Elio Riboli; Gilles Salles; Richard K Severson; Christine F Skibola; Karin E Smedby; Melissa C Southey; John J Spinelli; Anthony Staines; Carolyn Stewart; Lauren R Teras; Lesley F Tinker; Ruth C Travis; Claire M Vajdic; Roel C H Vermeulen; Joseph Vijai; Elisabete Weiderpass; Stephanie Weinstein; Nicole Wong Doo; Yawei Zhang; Tongzhang Zheng; Stephen J Chanock; Nathaniel Rothman; James R Cerhan; Michael Dean; Nicola J Camp; Meredith Yeager; Sonja I Berndt
Journal:  J Transl Genet Genom       Date:  2021-06-17

5.  Germline HLA-B evolutionary divergence influences the efficacy of immune checkpoint blockade therapy in gastrointestinal cancer.

Authors:  Zhihao Lu; Huan Chen; Xi Jiao; Yujiao Wang; Lijia Wu; Huaibo Sun; Shuang Li; Jifang Gong; Jian Li; Jianling Zou; Keyan Yang; Ying Hu; Beibei Mao; Lei Zhang; Xiaotian Zhang; Zhi Peng; Ming Lu; Zhenghang Wang; Henghui Zhang; Lin Shen
Journal:  Genome Med       Date:  2021-11-03       Impact factor: 11.117

6.  Establishment of tumor inflammasome clusters with distinct immunogenomic landscape aids immunotherapy.

Authors:  Qingyu Liang; Jianqi Wu; Xin Zhao; Shuai Shen; Chen Zhu; Tianqi Liu; Xiao Cui; Ling Chen; Chunmi Wei; Peng Cheng; Wen Cheng; Anhua Wu
Journal:  Theranostics       Date:  2021-10-17       Impact factor: 11.556

Review 7.  Mechanisms of Immunosuppressive Tumor Evasion: Focus on Acute Lymphoblastic Leukemia.

Authors:  Silvia Jiménez-Morales; Ivan Sammir Aranda-Uribe; Carlos Jhovani Pérez-Amado; Julian Ramírez-Bello; Alfredo Hidalgo-Miranda
Journal:  Front Immunol       Date:  2021-11-18       Impact factor: 7.561

8.  HLA Homozygosity and Likelihood of Sensitization in Kidney Transplant Candidates.

Authors:  Joshua A Rushakoff; Loren Gragert; Marcelo J Pando; Darren Stewart; Edmund Huang; Irene Kim; Stanley Jordan; Kelsi Lindblad; Xiaohai Zhang; Peter Lalli; Jignesh K Patel; Jon A Kobashigawa; Evan P Kransdorf
Journal:  Transplant Direct       Date:  2022-04-07

9.  Genetic mechanisms of HLA-I loss and immune escape in diffuse large B cell lymphoma.

Authors:  Marco Fangazio; Erik Ladewig; Karen Gomez; Laura Garcia-Ibanez; Rahul Kumar; Julie Teruya-Feldstein; Davide Rossi; Ioan Filip; Qiang Pan-Hammarström; Giorgio Inghirami; Renzo Boldorini; German Ott; Annette M Staiger; Björn Chapuy; Gianluca Gaidano; Govind Bhagat; Katia Basso; Raul Rabadan; Laura Pasqualucci; Riccardo Dalla-Favera
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

10.  Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts.

Authors:  Sara R Rashkin; Rebecca E Graff; Linda Kachuri; Khanh K Thai; Stacey E Alexeeff; Maruta A Blatchins; Taylor B Cavazos; Douglas A Corley; Nima C Emami; Joshua D Hoffman; Eric Jorgenson; Lawrence H Kushi; Travis J Meyers; Stephen K Van Den Eeden; Elad Ziv; Laurel A Habel; Thomas J Hoffmann; Lori C Sakoda; John S Witte
Journal:  Nat Commun       Date:  2020-09-04       Impact factor: 14.919

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