| Literature DB >> 29728560 |
Kenichi Nagata1, Mika Takahashi2, Yukio Matsuba2, Fumi Okuyama-Uchimura2, Kaori Sato2, Shoko Hashimoto2, Takashi Saito2,3, Takaomi C Saido4.
Abstract
Although, a number of pathogenic mutations have been found for Alzheimer's disease (AD), only one protective mutation has been identified so far in humans. Here we identify possible protective deletion mutations in the 3'-UTR of the amyloid precursor protein (App) gene in mice. We use an App knock-in mouse model carrying a humanized Aβ sequence and three AD mutations in the endogenous App gene. Genome editing of the model zygotes using multiple combinations of CRISPR/Cas9 tools produces genetically mosaic animals with various App 3'-UTR deletions. Depending on the editing efficiency, the 3'-UTR disruption mitigates the Aβ pathology development through transcriptional and translational regulation of APP expression. Notably, an App knock-in mouse with a 34-bp deletion in a 52-bp regulatory element adjacent to the stop codon shows a substantial reduction in Aβ pathology. Further functional characterization of the identified element should provide deeper understanding of the pathogenic mechanisms of AD.Entities:
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Year: 2018 PMID: 29728560 PMCID: PMC5935712 DOI: 10.1038/s41467-018-04238-0
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Fig. 1Disruption of App 3′-UTR in NL-G-F knock-in mice. a Positions of targeting sgRNAs and detection primers used for CRISPR/Cas9-mediated deletion of App 3′-UTR. Red arrowheads indicate Cas9 cleavage sites within the sgRNA target sites. b Strategy for genome editing of homozygous NL-G-F mouse zygotes. c PCR-based genotyping results of NL-G-F ΔUTR mice. Genotyping was performed using mouse brain samples. In contrast to unedited NL-G-F, NL-G-F ΔUTR showed various deletion in the App 3′-UTR. The deletion efficiency was calculated as the relative ratio of the intensity of deleted fragments (parenthesis) to that of parental band (arrow). The efficiency of each NL-G-F ΔUTR mouse is represented on the bottom of each lane. d Exact sequences of cleaved fragments from four representative NL-G-F ΔUTR mice (#2, #7, #8, and #9 from Fig. 1c). PCR products from mouse brain DNA samples were subcloned into the pTAC-1 vector and individual clones were picked and sequenced
Fig. 2Prevention of Aβ accumulation in 6-month-old App 3′-UTR deleted NL-G-F mice. a Aβ pathology in 6-month-old NL-G-F ΔUTR mouse brains, as well as unedited control NL-G-F brains. Scale bar: 1 mm. b Negative correlation between Aβ accumulation and genome editing efficiency in NL-G-F ΔUTR mouse brains (n = 13). c Positive correlation between normalized APP protein expression and genome editing efficiency in NL-G-F ΔUTR mouse brains (n = 13). Western blotting was performed using an antibody against N terminus of APP protein. d–g Negative correlation between normalized Aβ levels and deletion efficiency in 6-month-old NL-G-F ΔUTR mouse brains (n = 13). Aβ40 and Aβ42 levels in both the Tris-HCl-buffered saline (TS) and GuHCl fractions were quantified by ELISA. h Strategy of CRISPR/Cas9-mediated NL-G-F Δ400. Positions of targeting sgRNAs are shown by scissors. i Negative correlation between Aβ levels and deletion efficiency in female NL-G-F Δ400 mouse brains (n = 5). j Positive correlation between normalized APP protein expression and genome editing efficiency in NL-G-F Δ400 mouse brains (n = 11)
Fig. 3In vivo exploration of the regulatory elements on App 3′-UTR. a Sequence conservation of 52-bp regulatory element between the mouse and human. b Strategy for in vivo disruption of the 52-bp element by CRISPR/Cas9. Positions of targeting sgRNAs are shown by scissors. c Aβ pathology in 6-month-old NL-G-F Δ100, as well as unedited control NL-G-F brains. Scale bar: 1 mm. d Sequence analysis of founder #3 with bi-allelic 34-bp deletion. The fractions on the right indicate the mutant reads number out of total reads number. e Reduced Aβ levels in a 6-month-old NL-G-F Δ100 mouse brain (#3). Three unedited NL-G-F samples were used for normalization. The unedited control data represent mean ± SD. f A representative APP western blot image for 6-month-old NL-G-F Δ100 mouse brains. g Reduced APP expression at transcriptional and translational levels in a NL-G-F Δ100 mouse brain (#3). Three unedited NL-G-F samples were used for normalization. The unedited control data represent mean ± SD