| Literature DB >> 29728093 |
Andrea Princivalle1, Lorenzo Monasta2, Giovanni Butturini3, Claudio Bassi4, Luigi Perbellini5.
Abstract
BACKGROUND: In the last decade many studies showed that the exhaled breath of subjects suffering from several pathological conditions has a peculiar volatile organic compound (VOC) profile. The objective of the present work was to analyse the VOCs in alveolar air to build a diagnostic tool able to identify the presence of pancreatic ductal adenocarcinoma in patients with histologically confirmed disease.Entities:
Keywords: Alveolar air; IMR-MS; LASSO logistic regression; Pancreatic adenocarcinoma; Volatile organic compounds
Mesh:
Substances:
Year: 2018 PMID: 29728093 PMCID: PMC5935919 DOI: 10.1186/s12885-018-4452-0
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Alveolar air and pancreatic neoplasms: description of the sample of cases and controls of ages ≥40 and ≤ 75, n.167*
| Controls (n.102) | Ductal Adenocarcinomas (n.65) | |
|---|---|---|
| Gender | ||
| - males | 51 (50%) | 36 (55%) |
| - females | 51 (50%) | 29 (45%) |
| Age | ||
| - mean (SD) | 53 (9) | 61 (8) |
| - median (IQR) | 51 (45-61) | 61 (55-68)** |
| Preexisting or previous diseases | ||
| Arterial hypertension | 12 | 10 |
| diabetes mellitus | 6 | 13 |
| Other previous and resolved neoplasms | 3 | 11 |
| other pancreatic diseases | 2 | // |
| other pathologies | 11 | 6 |
SD standard deviation, IQR inter-quartile range
*Differences between controls and outcome categories were calculated with Fisher exact test for dichotomous independent variables and with non-parametric Mann-Whitney rank sum test for continuous variables not distributed normally. Only significant differences (p < 0.05) are reported in the table
**Mann-Whitney: p = 0.000
Environmental and alveolar concentration of products for which we prepared a specific calibration. Data are expressed in ppb and regard 219 samplings both for environmental and alveolar concentrations
| Enviromental Concentration | Alveolar Concentration | |||||||
|---|---|---|---|---|---|---|---|---|
| Mean | Median | range | 5-95th percentile | Mean | Median | range | 5-95th percentile | |
| Methanol | 654 | 633 | 267-1789 | 323-1166 | 537 | 492 | 259-3021 | 294-841 |
| Acetonitrile | 196 | 129 | 34-1820 | 48-802 | 269 | 176 | 43-1840 | 66-1164 |
| Ethanol | 924 | 525 | 71-6244 | 121-3187 | 532 | 349 | 47-8668 | 88-1361 |
| MEK | 55 | 45 | 12-352 | 14-147 | 102 | 78 | 20-622 | 36-281 |
| Acetone | 217 | 181 | 52-2432 | 67-392 | 721 | 534 | 116-10,179 | 244-1676 |
| Isoprene | 20.8 | 18 | 5-262 | 8.9-34.4 | 160 | 149 | 17-428 | 63-292 |
| n-Propanol | 79 | 47 | 16-2093 | 20-172 | 98 | 80 | 31-619 | 45-194 |
| Benzene | 6.1 | 5.6 | 0.1-21 | 0.7-13 | 11.7 | 9.4 | 0.9-85.7 | 2.2-35.9 |
| Toluene | 5.2 | 4.8 | 0.1-22.1 | 1.1-11.7 | 5.8 | 4.8 | 0.6-25.9 | 1.6-14.5 |
| n-Heptane | 19.5 | 14.3 | 4.6-679.5 | 6.7-34.1 | 18.7 | 15.6 | 4.1-500.1 | 6-31.5 |
| SO2 | 10.3 | 10.4 | 4.3-25.7 | 5.9-14.6 | 5.9 | 9.8 | 3.1-16.7 | 4.5-13.8 |
| NH3 | 77 | 70 | 17-302 | 24-116 | 118 | 101 | 14-737 | 40-246 |
Fig. 1Alveolar (unbroken line) and environmental (dotted line) concentrations used for the statistics (70 groups of molecules): molecules which were significantly more present in the environmental air than in the alveolar air have been excluded (data are reported in ppb). The 22 molecules excluded were the following: M19, M26, M27, M28, M31, M32, M45, M48, M49, M73, M92, M97, M98, M102, M103, M104, M105, M116, M117, M18, M120 and M121
Ductal Adenocarcinoma Model obtained from the first and second LASSO logistic regression (n = 167)
| Variables | Regression Coefficients of the first LLRa | Regression Coefficients of the second LLRb | 95% CIb |
|---|---|---|---|
| Intercept | −5.3255467964 | −4.832765 | −19.837 – + 4.153 |
| Age | + 0.1493804071 | + 0.119876 | + 0.032 – + 0.403 |
| Ammonia | + 0.0036286701 | + 0.001723 | + 0.000 – + 0.023 |
| M34 | −0.1699431526 | − 0.102787 | − 0.402 – + 0.000 |
| M37 | + 0.0006675672 | // | // |
| M42 | + 0.0009076002 | // | // |
| M43 | + 0.0007153015 | + 0.002183 | −0.006 – + 0.005 |
| M44 | + 0.0047526254 | + 0.001295 | + 0.001 – + 0.051 |
| M46 | −0.0007407600 | // | // |
| M60 | −0.0003390278 | // | // |
| Propanol | + 0.0054942415 | // | // |
| M62 | −0.2138505207 | −0.335321 | −1.007 – − 0.077 |
| Sulfur dioxide | − 0.2595054348 | −0.384319 | − 1.116 – − 0.132 |
| M66 | − 0.1459224298 | // | // |
| M71 | + 0.0062530914 | + 0.012486 | + 0.000 – + 0.040 |
| M74 | −0.0120892660 | −0.021012 | − 0.159 – + 0.000 |
| M75 | − 0.0008072235 | // | // |
| M88 | −0.0142597155 | // | // |
| M89 | + 0.2297944263 | + 0.426043 | + 0.536 – + 2.368 |
| M91 | −0.0286331109 | // | // |
| M106 | −0.0135291587 | // | // |
| M111 | + 0.0926572905 | // | // |
| M112 | + 0.0054448431 | + 0.023171 | + 0.000 – + 0.230 |
CI confidence interval, obtained from a 10-fold iteration Bootstrap procedure
aRegression Coefficients of the first LASSO logistic regression (2nd column)
bRegression coefficients of the Ductal Adenocarcinoma Model obtained from the second, iterated LASSO logistic regression (3rd and 4th columns)
Fig. 2Sensitivity and specificity curves for the Ductal Adenocarcinoma Model and Receiver Operating Characteristic curve (area under ROC = 0.9879)
Main statistical parameters related to VOCs selected by the final predictive model to discriminate between 65 subjects with pancreatic ductal adenocarcinoma (PDA) and 102 controls (data in ppb)
| Ammonia | M34 | M43 | M44 | M62 | Sulfur dioxide | M71 | M74 | M89 | M112 | |
|---|---|---|---|---|---|---|---|---|---|---|
| Control subjects | ||||||||||
| Median | 91.0 | 19.4 | 1025.7 | 7220.3 | 7.3 | 11.0 | 31.9 | 7.9 | 1.3 | 8.9 |
| Geometrical Mean | 88.8 | 18.7 | 1023.9 | 6576.8 | 7.5 | 10.4 | 36.1 | 9.4 | 1.5 | 9.6 |
| Minimum value | 13.8 | 9.4 | 288.8 | 2879.3 | 2.3 | 4.9 | 12.5 | 2.2 | 0.1 | 2.8 |
| Maximum value | 459.6 | 29.5 | 2697.8 | 14,011.8 | 41.7 | 14.5 | 186.9 | 383.5 | 15.2 | 152.6 |
| Arithmetic mean | 106.5 | 19.2 | 1087.5 | 6918.8 | 8.7 | 10.6 | 44.5 | 17.4 | 2.2 | 12.0 |
| Standard deviation | 72.9 | 4.0 | 397.8 | 2115.9 | 5.7 | 2.0 | 36.1 | 41.7 | 2.5 | 15.4 |
| Patients with PDA | ||||||||||
| Median | 106.7 | 12.4 | 1195.7 | 6106.7 | 5.7 | 6.0 | 42.2 | 8.4 | 3.5 | 14.0 |
| Geometrical Mean | 118.2 | 12.8 | 1337.8 | 6141.6 | 6.3 | 6.9 | 41.2 | 9.6 | 3.4 | 14.5 |
| Minimum value | 33.4 | 8.5 | 402.4 | 3521.3 | 1.9 | 3.1 | 15.4 | 1.9 | 0.3 | 6.1 |
| Maximum value | 737.0 | 30.4 | 13,697.7 | 10,436.8 | 33.1 | 16.7 | 179.1 | 130.9 | 42.1 | 71.4 |
| Arithmetic mean | 136.7 | 13.3 | 1874.4 | 6371.2 | 7.7 | 7.7 | 49.4 | 16.2 | 5.7 | 16.7 |
| Standard deviation | 102.8 | 4.4 | 2109.5 | 1749.0 | 6.0 | 3.6 | 34.5 | 22.5 | 6.9 | 10.9 |
Main statistical parameters related to VOCs related to the 50 subjects (26 controls and 24 cases) used for validation of the model itself
| Ammonia | M34 | M43 | M44 | M62 | Sulfur dioxide | M71 | M74 | M89 | M112 | |
|---|---|---|---|---|---|---|---|---|---|---|
| Control subjects | ||||||||||
| Median | 101.5 | 17.7 | 849.5 | 5430.4 | 5.1 | 10.8 | 17.5 | 8.0 | 1.3 | 6.9 |
| Geometrical Mean | 101.0 | 18.6 | 873.9 | 5400.7 | 4.7 | 11.0 | 19.4 | 9.4 | 1.4 | 8.0 |
| Minimum value | 27.3 | 14.9 | 622.0 | 3755.8 | 2.1 | 9.0 | 12.4 | 4.5 | 0.1 | 5.1 |
| Maximum value | 359.1 | 24.2 | 1430.9 | 7560.7 | 11.0 | 14.8 | 46.0 | 106.9 | 14.1 | 73.5 |
| Arithmetic mean | 123.6 | 18.8 | 888.5 | 5513.7 | 5.1 | 11.0 | 20.5 | 13.7 | 1.9 | 10.1 |
| Standard deviation | 85.4 | 2.4 | 176.2 | 1134.5 | 2.2 | 1.1 | 7.9 | 20.1 | 2.6 | 13.1 |
| Patients with PDA | ||||||||||
| Median | 185.7 | 9.8 | 1319.2 | 3154.1 | 11.3 | 6.3 | 21.6 | 31.0 | 5.1 | 19.5 |
| Geometrical Mean | 205.6 | 6.1 | 1518.1 | 2477.8 | 10.5 | 7.0 | 22.8 | 29.6 | 4.6 | 21.8 |
| Minimum value | 52.7 | 0.9 | 581.3 | 461.9 | 3.0 | 5.1 | 15.8 | 6.9 | 1.2 | 8.8 |
| Maximum value | 1193.3 | 18.5 | 5377.7 | 4964.1 | 29.7 | 38.7 | 38.0 | 302.7 | 11.4 | 58.2 |
| Arithmetic mean | 293.7 | 8.4 | 1811.5 | 2881.4 | 12.2 | 7.9 | 23.7 | 45.0 | 5.3 | 25.9 |
| Standard deviation | 293.7 | 5.0 | 1213.8 | 1337.4 | 6.8 | 6.6 | 6.7 | 60.9 | 2.9 | 15.7 |