Literature DB >> 29709259

Cancer CRISPR Screens In Vivo.

Ryan D Chow1, Sidi Chen2.   

Abstract

Clustered regularly interspaced short palindromic repeats (CRISPR) screening is a powerful toolset for investigating diverse biological processes. Most CRISPR screens to date have been performed with in vitro cultures or cellular transplant models. To interrogate cancer in animal models that more closely recapitulate the human disease, autochthonous direct in vivo CRISPR screens have recently been developed that can identify causative drivers in the native tissue microenvironment. By empowering multiplexed mutagenesis in fully immunocompetent animals, direct in vivo CRISPR screens enable the rapid generation of patient-specific avatars that can guide precision medicine. This Opinion article discusses the current status of in vivo CRISPR screens in cancer and offers perspectives on future applications.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR screen; cancer; functional genomics; in vivo

Mesh:

Year:  2018        PMID: 29709259      PMCID: PMC5935117          DOI: 10.1016/j.trecan.2018.03.002

Source DB:  PubMed          Journal:  Trends Cancer        ISSN: 2405-8025


  70 in total

Review 1.  Microenvironmental regulation of tumor progression and metastasis.

Authors:  Daniela F Quail; Johanna A Joyce
Journal:  Nat Med       Date:  2013-11       Impact factor: 53.440

2.  Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq.

Authors:  Diego Adhemar Jaitin; Assaf Weiner; Ido Yofe; David Lara-Astiaso; Hadas Keren-Shaul; Eyal David; Tomer Meir Salame; Amos Tanay; Alexander van Oudenaarden; Ido Amit
Journal:  Cell       Date:  2016-12-15       Impact factor: 41.582

Review 3.  High-throughput functional genomics using CRISPR-Cas9.

Authors:  Ophir Shalem; Neville E Sanjana; Feng Zhang
Journal:  Nat Rev Genet       Date:  2015-04-09       Impact factor: 53.242

Review 4.  Lessons from the cancer genome.

Authors:  Levi A Garraway; Eric S Lander
Journal:  Cell       Date:  2013-03-28       Impact factor: 41.582

5.  Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients.

Authors:  Roy S Herbst; Jean-Charles Soria; Marcin Kowanetz; Gregg D Fine; Omid Hamid; Michael S Gordon; Jeffery A Sosman; David F McDermott; John D Powderly; Scott N Gettinger; Holbrook E K Kohrt; Leora Horn; Donald P Lawrence; Sandra Rost; Maya Leabman; Yuanyuan Xiao; Ahmad Mokatrin; Hartmut Koeppen; Priti S Hegde; Ira Mellman; Daniel S Chen; F Stephen Hodi
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

Review 6.  High-Throughput Approaches to Pinpoint Function within the Noncoding Genome.

Authors:  Antonino Montalbano; Matthew C Canver; Neville E Sanjana
Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

7.  Repurposing the CRISPR-Cas9 system for targeted DNA methylation.

Authors:  Aleksandar Vojta; Paula Dobrinić; Vanja Tadić; Luka Bočkor; Petra Korać; Boris Julg; Marija Klasić; Vlatka Zoldoš
Journal:  Nucleic Acids Res       Date:  2016-03-11       Impact factor: 16.971

8.  A CRISPR/Cas9 Functional Screen Identifies Rare Tumor Suppressors.

Authors:  Alexandra Katigbak; Regina Cencic; Francis Robert; Patrick Sénécha; Claudio Scuoppo; Jerry Pelletier
Journal:  Sci Rep       Date:  2016-12-16       Impact factor: 4.379

9.  Pooled CRISPR screening with single-cell transcriptome readout.

Authors:  André F Rendeiro; Christian Schmidl; Paul Datlinger; Thomas Krausgruber; Peter Traxler; Johanna Klughammer; Linda C Schuster; Amelie Kuchler; Donat Alpar; Christoph Bock
Journal:  Nat Methods       Date:  2017-01-18       Impact factor: 28.547

10.  Patient-derived xenografts undergo mouse-specific tumor evolution.

Authors:  Uri Ben-David; Gavin Ha; Yuen-Yi Tseng; Noah F Greenwald; Coyin Oh; Juliann Shih; James M McFarland; Bang Wong; Jesse S Boehm; Rameen Beroukhim; Todd R Golub
Journal:  Nat Genet       Date:  2017-10-09       Impact factor: 38.330

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  25 in total

Review 1.  Computational algorithms for in silico profiling of activating mutations in cancer.

Authors:  E Joseph Jordan; Keshav Patil; Krishna Suresh; Jin H Park; Yael P Mosse; Mark A Lemmon; Ravi Radhakrishnan
Journal:  Cell Mol Life Sci       Date:  2019-04-13       Impact factor: 9.261

Review 2.  CRISPR in cancer biology and therapy.

Authors:  Alyna Katti; Bianca J Diaz; Christina M Caragine; Neville E Sanjana; Lukas E Dow
Journal:  Nat Rev Cancer       Date:  2022-02-22       Impact factor: 60.716

Review 3.  A new era in functional genomics screens.

Authors:  Laralynne Przybyla; Luke A Gilbert
Journal:  Nat Rev Genet       Date:  2021-09-20       Impact factor: 53.242

4.  CRISPR Screens to Identify Regulators of Tumor Immunity.

Authors:  Martin W LaFleur; Arlene H Sharpe
Journal:  Annu Rev Cancer Biol       Date:  2021-12-23

Review 5.  Recent Advances and Therapeutic Strategies Using CRISPR Genome Editing Technique for the Treatment of Cancer.

Authors:  Shreyasi Maity; Rishyani Mukherjee; Satarupa Banerjee
Journal:  Mol Biotechnol       Date:  2022-08-23       Impact factor: 2.860

Review 6.  Exploring liver cancer biology through functional genetic screens.

Authors:  Cun Wang; Ying Cao; Chen Yang; René Bernards; Wenxin Qin
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2021-06-23       Impact factor: 46.802

Review 7.  Cancer diagnosis and immunotherapy in the age of CRISPR.

Authors:  Peter J Cook; Andrea Ventura
Journal:  Genes Chromosomes Cancer       Date:  2018-12-20       Impact factor: 5.006

Review 8.  Targeting cancer epigenetics with CRISPR-dCAS9: Principles and prospects.

Authors:  Mohammad Mijanur Rahman; Trygve O Tollefsbol
Journal:  Methods       Date:  2020-04-18       Impact factor: 3.608

Review 9.  Research Techniques Made Simple: CRISPR Genetic Screens.

Authors:  Auke B C Otten; Bryan K Sun
Journal:  J Invest Dermatol       Date:  2020-04       Impact factor: 8.551

10.  The transformational impact of site-specific DNA modifiers on biomedicine and agriculture.

Authors:  Kathryn Polkoff; Jorge A Piedrahita
Journal:  Anim Reprod       Date:  2018-08-16       Impact factor: 1.807

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