Literature DB >> 29700470

No evidence for unknown archaic ancestry in South Asia.

Pontus Skoglund1,2,3, Swapan Mallick4,5,6, Nick Patterson5, David Reich7,8,9.   

Abstract

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Year:  2018        PMID： 29700470      PMCID： PMC6433599          DOI： 10.1038/s41588-018-0097-9

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  10 in total

1.  A high-coverage genome sequence from an archaic Denisovan individual.

Authors:  Matthias Meyer; Martin Kircher; Marie-Theres Gansauge; Heng Li; Fernando Racimo; Swapan Mallick; Joshua G Schraiber; Flora Jay; Kay Prüfer; Cesare de Filippo; Peter H Sudmant; Can Alkan; Qiaomei Fu; Ron Do; Nadin Rohland; Arti Tandon; Michael Siebauer; Richard E Green; Katarzyna Bryc; Adrian W Briggs; Udo Stenzel; Jesse Dabney; Jay Shendure; Jacob Kitzman; Michael F Hammer; Michael V Shunkov; Anatoli P Derevianko; Nick Patterson; Aida M Andrés; Evan E Eichler; Montgomery Slatkin; David Reich; Janet Kelso; Svante Pääbo
Journal:  Science       Date:  2012-08-30       Impact factor: 47.728

2.  Ancient admixture in human history.

Authors:  Nick Patterson; Priya Moorjani; Yontao Luo; Swapan Mallick; Nadin Rohland; Yiping Zhan; Teri Genschoreck; Teresa Webster; David Reich
Journal:  Genetics       Date:  2012-09-07       Impact factor: 4.562

3.  A draft sequence of the Neandertal genome.

Authors:  Johannes Krause; Adrian W Briggs; Tomislav Maricic; Udo Stenzel; Martin Kircher; Nick Patterson; Richard E Green; Heng Li; Weiwei Zhai; Markus Hsi-Yang Fritz; Nancy F Hansen; Eric Y Durand; Anna-Sapfo Malaspinas; Jeffrey D Jensen; Tomas Marques-Bonet; Can Alkan; Kay Prüfer; Matthias Meyer; Hernán A Burbano; Jeffrey M Good; Rigo Schultz; Ayinuer Aximu-Petri; Anne Butthof; Barbara Höber; Barbara Höffner; Madlen Siegemund; Antje Weihmann; Chad Nusbaum; Eric S Lander; Carsten Russ; Nathaniel Novod; Jason Affourtit; Michael Egholm; Christine Verna; Pavao Rudan; Dejana Brajkovic; Željko Kucan; Ivan Gušic; Vladimir B Doronichev; Liubov V Golovanova; Carles Lalueza-Fox; Marco de la Rasilla; Javier Fortea; Antonio Rosas; Ralf W Schmitz; Philip L F Johnson; Evan E Eichler; Daniel Falush; Ewan Birney; James C Mullikin; Montgomery Slatkin; Rasmus Nielsen; Janet Kelso; Michael Lachmann; David Reich; Svante Pääbo
Journal:  Science       Date:  2010-05-07       Impact factor: 47.728

4.  Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania.

Authors:  David Reich; Nick Patterson; Martin Kircher; Frederick Delfin; Madhusudan R Nandineni; Irina Pugach; Albert Min-Shan Ko; Ying-Chin Ko; Timothy A Jinam; Maude E Phipps; Naruya Saitou; Andreas Wollstein; Manfred Kayser; Svante Pääbo; Mark Stoneking
Journal:  Am J Hum Genet       Date:  2011-09-22       Impact factor: 11.025

5.  Genomic analysis of Andamanese provides insights into ancient human migration into Asia and adaptation.

Authors:  Mayukh Mondal; Ferran Casals; Tina Xu; Giovanni M Dall'Olio; Marc Pybus; Mihai G Netea; David Comas; Hafid Laayouni; Qibin Li; Partha P Majumder; Jaume Bertranpetit
Journal:  Nat Genet       Date:  2016-07-25       Impact factor: 38.330

6.  Genetic history of an archaic hominin group from Denisova Cave in Siberia.

Authors:  David Reich; Richard E Green; Martin Kircher; Johannes Krause; Nick Patterson; Eric Y Durand; Bence Viola; Adrian W Briggs; Udo Stenzel; Philip L F Johnson; Tomislav Maricic; Jeffrey M Good; Tomas Marques-Bonet; Can Alkan; Qiaomei Fu; Swapan Mallick; Heng Li; Matthias Meyer; Evan E Eichler; Mark Stoneking; Michael Richards; Sahra Talamo; Michael V Shunkov; Anatoli P Derevianko; Jean-Jacques Hublin; Janet Kelso; Montgomery Slatkin; Svante Pääbo
Journal:  Nature       Date:  2010-12-23       Impact factor: 49.962

7.  Archaic human ancestry in East Asia.

Authors:  Pontus Skoglund; Mattias Jakobsson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-31       Impact factor: 11.205

8.  Ancient human genomes suggest three ancestral populations for present-day Europeans.

Authors:  Iosif Lazaridis; Nick Patterson; Alissa Mittnik; Gabriel Renaud; Swapan Mallick; Karola Kirsanow; Peter H Sudmant; Joshua G Schraiber; Sergi Castellano; Mark Lipson; Bonnie Berger; Christos Economou; Ruth Bollongino; Qiaomei Fu; Kirsten I Bos; Susanne Nordenfelt; Heng Li; Cesare de Filippo; Kay Prüfer; Susanna Sawyer; Cosimo Posth; Wolfgang Haak; Fredrik Hallgren; Elin Fornander; Nadin Rohland; Dominique Delsate; Michael Francken; Jean-Michel Guinet; Joachim Wahl; George Ayodo; Hamza A Babiker; Graciela Bailliet; Elena Balanovska; Oleg Balanovsky; Ramiro Barrantes; Gabriel Bedoya; Haim Ben-Ami; Judit Bene; Fouad Berrada; Claudio M Bravi; Francesca Brisighelli; George B J Busby; Francesco Cali; Mikhail Churnosov; David E C Cole; Daniel Corach; Larissa Damba; George van Driem; Stanislav Dryomov; Jean-Michel Dugoujon; Sardana A Fedorova; Irene Gallego Romero; Marina Gubina; Michael Hammer; Brenna M Henn; Tor Hervig; Ugur Hodoglugil; Aashish R Jha; Sena Karachanak-Yankova; Rita Khusainova; Elza Khusnutdinova; Rick Kittles; Toomas Kivisild; William Klitz; Vaidutis Kučinskas; Alena Kushniarevich; Leila Laredj; Sergey Litvinov; Theologos Loukidis; Robert W Mahley; Béla Melegh; Ene Metspalu; Julio Molina; Joanna Mountain; Klemetti Näkkäläjärvi; Desislava Nesheva; Thomas Nyambo; Ludmila Osipova; Jüri Parik; Fedor Platonov; Olga Posukh; Valentino Romano; Francisco Rothhammer; Igor Rudan; Ruslan Ruizbakiev; Hovhannes Sahakyan; Antti Sajantila; Antonio Salas; Elena B Starikovskaya; Ayele Tarekegn; Draga Toncheva; Shahlo Turdikulova; Ingrida Uktveryte; Olga Utevska; René Vasquez; Mercedes Villena; Mikhail Voevoda; Cheryl A Winkler; Levon Yepiskoposyan; Pierre Zalloua; Tatijana Zemunik; Alan Cooper; Cristian Capelli; Mark G Thomas; Andres Ruiz-Linares; Sarah A Tishkoff; Lalji Singh; Kumarasamy Thangaraj; Richard Villems; David Comas; Rem Sukernik; Mait Metspalu; Matthias Meyer; Evan E Eichler; Joachim Burger; Montgomery Slatkin; Svante Pääbo; Janet Kelso; David Reich; Johannes Krause
Journal:  Nature       Date:  2014-09-18       Impact factor: 49.962

9.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

10.  The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.

Authors:  Swapan Mallick; Heng Li; Mark Lipson; Iain Mathieson; Melissa Gymrek; Fernando Racimo; Mengyao Zhao; Niru Chennagiri; Susanne Nordenfelt; Arti Tandon; Pontus Skoglund; Iosif Lazaridis; Sriram Sankararaman; Qiaomei Fu; Nadin Rohland; Gabriel Renaud; Yaniv Erlich; Thomas Willems; Carla Gallo; Jeffrey P Spence; Yun S Song; Giovanni Poletti; Francois Balloux; George van Driem; Peter de Knijff; Irene Gallego Romero; Aashish R Jha; Doron M Behar; Claudio M Bravi; Cristian Capelli; Tor Hervig; Andres Moreno-Estrada; Olga L Posukh; Elena Balanovska; Oleg Balanovsky; Sena Karachanak-Yankova; Hovhannes Sahakyan; Draga Toncheva; Levon Yepiskoposyan; Chris Tyler-Smith; Yali Xue; M Syafiq Abdullah; Andres Ruiz-Linares; Cynthia M Beall; Anna Di Rienzo; Choongwon Jeong; Elena B Starikovskaya; Ene Metspalu; Jüri Parik; Richard Villems; Brenna M Henn; Ugur Hodoglugil; Robert Mahley; Antti Sajantila; George Stamatoyannopoulos; Joseph T S Wee; Rita Khusainova; Elza Khusnutdinova; Sergey Litvinov; George Ayodo; David Comas; Michael F Hammer; Toomas Kivisild; William Klitz; Cheryl A Winkler; Damian Labuda; Michael Bamshad; Lynn B Jorde; Sarah A Tishkoff; W Scott Watkins; Mait Metspalu; Stanislav Dryomov; Rem Sukernik; Lalji Singh; Kumarasamy Thangaraj; Svante Pääbo; Janet Kelso; Nick Patterson; David Reich
Journal:  Nature       Date:  2016-09-21       Impact factor: 49.962
  10 in total
  2 in total

Review 1.  Origins of modern human ancestry.

Authors:  Anders Bergström; Chris Stringer; Mateja Hajdinjak; Eleanor M L Scerri; Pontus Skoglund
Journal:  Nature       Date:  2021-02-10       Impact factor: 49.962

2.  Widespread Denisovan ancestry in Island Southeast Asia but no evidence of substantial super-archaic hominin admixture.

Authors:  Raymond Tobler; Chris S M Turney; Alan Cooper; Kristofer M Helgen; João C Teixeira; Guy S Jacobs; Chris Stringer; Jonathan Tuke; Georgi Hudjashov; Gludhug A Purnomo; Herawati Sudoyo; Murray P Cox
Journal:  Nat Ecol Evol       Date:  2021-03-22       Impact factor: 15.460
  2 in total

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