Literature DB >> 29694129

Deep Potential Molecular Dynamics: A Scalable Model with the Accuracy of Quantum Mechanics.

Linfeng Zhang1, Jiequn Han1, Han Wang2, Roberto Car3, Weinan E4.   

Abstract

We introduce a scheme for molecular simulations, the deep potential molecular dynamics (DPMD) method, based on a many-body potential and interatomic forces generated by a carefully crafted deep neural network trained with ab initio data. The neural network model preserves all the natural symmetries in the problem. It is first-principles based in the sense that there are no ad hoc components aside from the network model. We show that the proposed scheme provides an efficient and accurate protocol in a variety of systems, including bulk materials and molecules. In all these cases, DPMD gives results that are essentially indistinguishable from the original data, at a cost that scales linearly with system size.

Year:  2018        PMID: 29694129     DOI: 10.1103/PhysRevLett.120.143001

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  58 in total

1.  Neural networks-based variationally enhanced sampling.

Authors:  Luigi Bonati; Yue-Yu Zhang; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-15       Impact factor: 11.205

2.  Dielectric response with short-ranged electrostatics.

Authors:  Stephen J Cox
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

3.  Signatures of a liquid-liquid transition in an ab initio deep neural network model for water.

Authors:  Thomas E Gartner; Linfeng Zhang; Pablo M Piaggi; Roberto Car; Athanassios Z Panagiotopoulos; Pablo G Debenedetti
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-02       Impact factor: 11.205

4.  Uniformly accurate machine learning-based hydrodynamic models for kinetic equations.

Authors:  Jiequn Han; Chao Ma; Zheng Ma; Weinan E
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-16       Impact factor: 11.205

5.  Short solvent model for ion correlations and hydrophobic association.

Authors:  Ang Gao; Richard C Remsing; John D Weeks
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-07       Impact factor: 11.205

6.  Predicting Molecular Energy Using Force-Field Optimized Geometries and Atomic Vector Representations Learned from an Improved Deep Tensor Neural Network.

Authors:  Jianing Lu; Cheng Wang; Yingkai Zhang
Journal:  J Chem Theory Comput       Date:  2019-06-12       Impact factor: 6.006

7.  Machine Learning for Electronically Excited States of Molecules.

Authors:  Julia Westermayr; Philipp Marquetand
Journal:  Chem Rev       Date:  2020-11-19       Impact factor: 60.622

8.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

9.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

10.  Dataset Construction to Explore Chemical Space with 3D Geometry and Deep Learning.

Authors:  Jianing Lu; Song Xia; Jieyu Lu; Yingkai Zhang
Journal:  J Chem Inf Model       Date:  2021-03-08       Impact factor: 4.956

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