Literature DB >> 29691590

Enhancer reprogramming in tumor progression: a new route towards cancer cell plasticity.

Luca Fagnocchi1, Vittoria Poli2, Alessio Zippo3,4,5.   

Abstract

Cancer heterogeneity arises during tumor progression as a consequence of genetic insults, environmental cues, and reversible changes in the epigenetic state, favoring tumor cell plasticity. The role of enhancer reprogramming is emerging as a relevant field in cancer biology as it supports adaptation of cancer cells to those environmental changes encountered during tumor progression and metastasis seeding. In this review, we describe the cancer-related alterations that drive oncogenic enhancer activity, leading to dysregulated transcriptional programs. We discuss the molecular mechanisms of both cis- and trans-factors in overriding the regulatory circuits that maintain cell-type specificity and imposing an alternative, de-regulated enhancer activity in cancer cells. We further comment on the increasing evidence which implicates stress response and aging-signaling pathways in the enhancer landscape reprogramming during tumorigenesis. Finally, we focus on the potential therapeutic implications of these enhancer-mediated subverted transcriptional programs, putting particular emphasis on the lack of information regarding tumor progression and the metastatic outgrowth, which still remain the major cause of mortality related to cancer.

Entities:  

Keywords:  Cancer; Cis-regulatory elements; DNA damage; Enhancer; Epigenetic; Metastasis; Reprogramming; Signaling pathways; Transcription factors; Tumor progression

Mesh:

Year:  2018        PMID: 29691590     DOI: 10.1007/s00018-018-2820-1

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  176 in total

1.  Hypermethylated LTR retrotransposon exhibits enhancer activity.

Authors:  Tianxiang Hu; Xingguo Zhu; Wenhu Pi; Miao Yu; Huidong Shi; Dorothy Tuan
Journal:  Epigenetics       Date:  2017-02-06       Impact factor: 4.528

Review 2.  Chromatin remodeling effects on enhancer activity.

Authors:  Estela García-González; Martín Escamilla-Del-Arenal; Rodrigo Arzate-Mejía; Félix Recillas-Targa
Journal:  Cell Mol Life Sci       Date:  2016-03-30       Impact factor: 9.261

Review 3.  Gene regulation at a distance: From remote enhancers to 3D regulatory ensembles.

Authors:  François Spitz
Journal:  Semin Cell Dev Biol       Date:  2016-06-27       Impact factor: 7.727

Review 4.  Transcription regulation by the Mediator complex.

Authors:  Julie Soutourina
Journal:  Nat Rev Mol Cell Biol       Date:  2017-12-06       Impact factor: 94.444

5.  Aberrant Activation of a Gastrointestinal Transcriptional Circuit in Prostate Cancer Mediates Castration Resistance.

Authors:  Shipra Shukla; Joanna Cyrta; Devan A Murphy; Edward G Walczak; Leili Ran; Praveen Agrawal; Yuanyuan Xie; Yuedan Chen; Shangqian Wang; Yu Zhan; Dan Li; Elissa W P Wong; Andrea Sboner; Himisha Beltran; Juan Miguel Mosquera; Jessica Sher; Zhen Cao; John Wongvipat; Richard P Koche; Anuradha Gopalan; Deyou Zheng; Mark A Rubin; Howard I Scher; Ping Chi; Yu Chen
Journal:  Cancer Cell       Date:  2017-11-16       Impact factor: 31.743

6.  Nfib Promotes Metastasis through a Widespread Increase in Chromatin Accessibility.

Authors:  Sarah K Denny; Dian Yang; Chen-Hua Chuang; Jennifer J Brady; Jing Shan Lim; Barbara M Grüner; Shin-Heng Chiou; Alicia N Schep; Jessika Baral; Cécile Hamard; Martine Antoine; Marie Wislez; Christina S Kong; Andrew J Connolly; Kwon-Sik Park; Julien Sage; William J Greenleaf; Monte M Winslow
Journal:  Cell       Date:  2016-06-30       Impact factor: 41.582

7.  The landscape of cancer genes and mutational processes in breast cancer.

Authors:  Philip J Stephens; Patrick S Tarpey; Helen Davies; Peter Van Loo; Chris Greenman; David C Wedge; Serena Nik-Zainal; Sancha Martin; Ignacio Varela; Graham R Bignell; Lucy R Yates; Elli Papaemmanuil; David Beare; Adam Butler; Angela Cheverton; John Gamble; Jonathan Hinton; Mingming Jia; Alagu Jayakumar; David Jones; Calli Latimer; King Wai Lau; Stuart McLaren; David J McBride; Andrew Menzies; Laura Mudie; Keiran Raine; Roland Rad; Michael Spencer Chapman; Jon Teague; Douglas Easton; Anita Langerød; Ming Ta Michael Lee; Chen-Yang Shen; Benita Tan Kiat Tee; Bernice Wong Huimin; Annegien Broeks; Ana Cristina Vargas; Gulisa Turashvili; John Martens; Aquila Fatima; Penelope Miron; Suet-Feung Chin; Gilles Thomas; Sandrine Boyault; Odette Mariani; Sunil R Lakhani; Marc van de Vijver; Laura van 't Veer; John Foekens; Christine Desmedt; Christos Sotiriou; Andrew Tutt; Carlos Caldas; Jorge S Reis-Filho; Samuel A J R Aparicio; Anne Vincent Salomon; Anne-Lise Børresen-Dale; Andrea L Richardson; Peter J Campbell; P Andrew Futreal; Michael R Stratton
Journal:  Nature       Date:  2012-05-16       Impact factor: 49.962

Review 8.  Transposable elements in the mammalian embryo: pioneers surviving through stealth and service.

Authors:  Patricia Gerdes; Sandra R Richardson; Dixie L Mager; Geoffrey J Faulkner
Journal:  Genome Biol       Date:  2016-05-09       Impact factor: 13.583

9.  DNA methylation at enhancers identifies distinct breast cancer lineages.

Authors:  Thomas Fleischer; Xavier Tekpli; Anthony Mathelier; Shixiong Wang; Daniel Nebdal; Hari P Dhakal; Kristine Kleivi Sahlberg; Ellen Schlichting; Anne-Lise Børresen-Dale; Elin Borgen; Bjørn Naume; Ragnhild Eskeland; Arnoldo Frigessi; Jörg Tost; Antoni Hurtado; Vessela N Kristensen
Journal:  Nat Commun       Date:  2017-11-09       Impact factor: 14.919

10.  A DNA methylation map of human cancer at single base-pair resolution.

Authors:  E Vidal; S Sayols; S Moran; A Guillaumet-Adkins; M P Schroeder; R Royo; M Orozco; M Gut; I Gut; N Lopez-Bigas; H Heyn; M Esteller
Journal:  Oncogene       Date:  2017-06-05       Impact factor: 9.867

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  12 in total

1.  A High-Throughput Chromatin Immunoprecipitation Sequencing Approach to Study the Role of MYC on the Epigenetic Landscape.

Authors:  Luca Fagnocchi; Alessio Zippo
Journal:  Methods Mol Biol       Date:  2021

2.  MUC1-C Activates the NuRD Complex to Drive Dedifferentiation of Triple-Negative Breast Cancer Cells.

Authors:  Tsuyoshi Hata; Hasan Rajabi; Hidekazu Takahashi; Yota Yasumizu; Wei Li; Caining Jin; Mark D Long; Qiang Hu; Song Liu; Atsushi Fushimi; Nami Yamashita; Ling Kui; Deli Hong; Masaaki Yamamoto; Masaaki Miyo; Masayuki Hiraki; Takahiro Maeda; Yozo Suzuki; Mehmet K Samur; Donald Kufe
Journal:  Cancer Res       Date:  2019-09-13       Impact factor: 12.701

3.  Epigenetic plasticity of enhancers in cancer.

Authors:  Jie Yao; Ji Chen; Lian-Yun Li; Min Wu
Journal:  Transcription       Date:  2020-01-16

Review 4.  The roles of epigenetics in cancer progression and metastasis.

Authors:  Jocelyn F Chen; Qin Yan
Journal:  Biochem J       Date:  2021-09-17       Impact factor: 3.766

Review 5.  Emerging roles of Myc in stem cell biology and novel tumor therapies.

Authors:  Go J Yoshida
Journal:  J Exp Clin Cancer Res       Date:  2018-07-27

Review 6.  Combining Diagnostic Imaging and Pathology for Improving Diagnosis and Prognosis of Cancer.

Authors:  Orazio Schillaci; Manuel Scimeca; Nicola Toschi; Rita Bonfiglio; Nicoletta Urbano; Elena Bonanno
Journal:  Contrast Media Mol Imaging       Date:  2019-07-01       Impact factor: 3.161

7.  Exogenous Fatty Acids Modulate ER Lipid Composition and Metabolism in Breast Cancer Cells.

Authors:  Angela Maria Rizzo; Irma Colombo; Gigliola Montorfano; Stefania Zava; Paola Antonia Corsetto
Journal:  Cells       Date:  2021-01-16       Impact factor: 6.600

Review 8.  Impact of the Tumor Microenvironment on Tumor Heterogeneity and Consequences for Cancer Cell Plasticity and Stemness.

Authors:  Ralf Hass; Juliane von der Ohe; Hendrik Ungefroren
Journal:  Cancers (Basel)       Date:  2020-12-11       Impact factor: 6.639

Review 9.  Dynamic Interactions of Transcription Factors and Enhancer Reprogramming in Cancer Progression.

Authors:  Emily Zboril; Hannah Yoo; Lizhen Chen; Zhijie Liu
Journal:  Front Oncol       Date:  2021-09-20       Impact factor: 6.244

10.  STAT3, a Hub Protein of Cellular Signaling Pathways, Is Triggered by β-Hexaclorocyclohexane.

Authors:  Elisabetta Rubini; Fabio Altieri; Silvia Chichiarelli; Flavia Giamogante; Stefania Carissimi; Giuliano Paglia; Alberto Macone; Margherita Eufemi
Journal:  Int J Mol Sci       Date:  2018-07-20       Impact factor: 5.923

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