Literature DB >> 29153843

Aberrant Activation of a Gastrointestinal Transcriptional Circuit in Prostate Cancer Mediates Castration Resistance.

Shipra Shukla1, Joanna Cyrta2, Devan A Murphy1, Edward G Walczak1, Leili Ran1, Praveen Agrawal3, Yuanyuan Xie1, Yuedan Chen1, Shangqian Wang1, Yu Zhan1, Dan Li4, Elissa W P Wong1, Andrea Sboner5, Himisha Beltran6, Juan Miguel Mosquera2, Jessica Sher1, Zhen Cao1, John Wongvipat1, Richard P Koche7, Anuradha Gopalan8, Deyou Zheng9, Mark A Rubin2, Howard I Scher10, Ping Chi11, Yu Chen12.   

Abstract

Prostate cancer exhibits a lineage-specific dependence on androgen signaling. Castration resistance involves reactivation of androgen signaling or activation of alternative lineage programs to bypass androgen requirement. We describe an aberrant gastrointestinal-lineage transcriptome expressed in ∼5% of primary prostate cancer that is characterized by abbreviated response to androgen-deprivation therapy and in ∼30% of castration-resistant prostate cancer. This program is governed by a transcriptional circuit consisting of HNF4G and HNF1A. Cistrome and chromatin analyses revealed that HNF4G is a pioneer factor that generates and maintains enhancer landscape at gastrointestinal-lineage genes, independent of androgen-receptor signaling. In HNF4G/HNF1A-double-negative prostate cancer, exogenous expression of HNF4G at physiologic levels recapitulates the gastrointestinal transcriptome, chromatin landscape, and leads to relative castration resistance.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ChIP-seq; HNF1A; HNF4G; SPINK1; androgen-deprivation therapy; castration resistance; enzalutamide; pioneer factor; prostate cancer

Mesh:

Substances:

Year:  2017        PMID: 29153843      PMCID: PMC5728174          DOI: 10.1016/j.ccell.2017.10.008

Source DB:  PubMed          Journal:  Cancer Cell        ISSN: 1535-6108            Impact factor:   31.743


  64 in total

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Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

2.  Glucose Tolerance Is Improved in Mice Invalidated for the Nuclear Receptor HNF-4γ: A Critical Role for Enteroendocrine Cell Lineage.

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Journal:  Diabetes       Date:  2015-03-31       Impact factor: 9.461

3.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

4.  Increased expression of genes converting adrenal androgens to testosterone in androgen-independent prostate cancer.

Authors:  Michael Stanbrough; Glenn J Bubley; Kenneth Ross; Todd R Golub; Mark A Rubin; Trevor M Penning; Phillip G Febbo; Steven P Balk
Journal:  Cancer Res       Date:  2006-03-01       Impact factor: 12.701

5.  Molecular determinants of resistance to antiandrogen therapy.

Authors:  Charlie D Chen; Derek S Welsbie; Chris Tran; Sung Hee Baek; Randy Chen; Robert Vessella; Michael G Rosenfeld; Charles L Sawyers
Journal:  Nat Med       Date:  2003-12-21       Impact factor: 53.440

6.  Hepatocyte nuclear factor 4alpha controls the development of a hepatic epithelium and liver morphogenesis.

Authors:  Fereshteh Parviz; Christine Matullo; Wendy D Garrison; Laura Savatski; John W Adamson; Gang Ning; Klaus H Kaestner; Jennifer M Rossi; Kenneth S Zaret; Stephen A Duncan
Journal:  Nat Genet       Date:  2003-07       Impact factor: 38.330

Review 7.  Pioneer transcription factors in cell reprogramming.

Authors:  Makiko Iwafuchi-Doi; Kenneth S Zaret
Journal:  Genes Dev       Date:  2014-12-15       Impact factor: 11.361

8.  Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing.

Authors:  Dirk Heckl; Monika S Kowalczyk; David Yudovich; Roger Belizaire; Rishi V Puram; Marie E McConkey; Anne Thielke; Jon C Aster; Aviv Regev; Benjamin L Ebert
Journal:  Nat Biotechnol       Date:  2014-06-22       Impact factor: 54.908

9.  Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing.

Authors:  Ola Wallerman; Mehdi Motallebipour; Stefan Enroth; Kalicharan Patra; Madhu Sudhan Reddy Bysani; Jan Komorowski; Claes Wadelius
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

10.  The androgen receptor cistrome is extensively reprogrammed in human prostate tumorigenesis.

Authors:  Mark M Pomerantz; Fugen Li; David Y Takeda; Romina Lenci; Apurva Chonkar; Matthew Chabot; Paloma Cejas; Francisca Vazquez; Jennifer Cook; Ramesh A Shivdasani; Michaela Bowden; Rosina Lis; William C Hahn; Philip W Kantoff; Myles Brown; Massimo Loda; Henry W Long; Matthew L Freedman
Journal:  Nat Genet       Date:  2015-10-12       Impact factor: 38.330

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  29 in total

1.  The Role of Lineage Plasticity in Prostate Cancer Therapy Resistance.

Authors:  Himisha Beltran; Andrew Hruszkewycz; Howard I Scher; Jeffrey Hildesheim; Jennifer Isaacs; Evan Y Yu; Kathleen Kelly; Daniel Lin; Adam Dicker; Julia Arnold; Toby Hecht; Max Wicha; Rosalie Sears; David Rowley; Richard White; James L Gulley; John Lee; Maria Diaz Meco; Eric J Small; Michael Shen; Karen Knudsen; David W Goodrich; Tamara Lotan; Amina Zoubeidi; Charles L Sawyers; Charles M Rudin; Massimo Loda; Timothy Thompson; Mark A Rubin; Abdul Tawab-Amiri; William Dahut; Peter S Nelson
Journal:  Clin Cancer Res       Date:  2019-07-30       Impact factor: 12.531

Review 2.  Cellular and Molecular Mechanisms Underlying Prostate Cancer Development: Therapeutic Implications.

Authors:  Ugo Testa; Germana Castelli; Elvira Pelosi
Journal:  Medicines (Basel)       Date:  2019-07-30

3.  Prostate cancer: Castration resistance driven by a GI transcriptional circuit.

Authors:  Louise Stone
Journal:  Nat Rev Urol       Date:  2017-12-12       Impact factor: 14.432

4.  Allele-specific epigenetic activity in prostate cancer and normal prostate tissue implicates prostate cancer risk mechanisms.

Authors:  Anamay Shetty; Ji-Heui Seo; Connor A Bell; Edward P O'Connor; Mark M Pomerantz; Matthew L Freedman; Alexander Gusev
Journal:  Am J Hum Genet       Date:  2021-10-25       Impact factor: 11.025

5.  Androgen receptor-independent prostate cancer: an emerging clinical entity.

Authors:  Ilyas Sahin; Anthony E Mega; Benedito A Carneiro
Journal:  Cancer Biol Ther       Date:  2018-02-02       Impact factor: 4.742

Review 6.  Enhancer reprogramming in tumor progression: a new route towards cancer cell plasticity.

Authors:  Luca Fagnocchi; Vittoria Poli; Alessio Zippo
Journal:  Cell Mol Life Sci       Date:  2018-04-24       Impact factor: 9.261

7.  Epigenetic Silencing of miRNA-338-5p and miRNA-421 Drives SPINK1-Positive Prostate Cancer.

Authors:  Vipul Bhatia; Anjali Yadav; Ritika Tiwari; Shivansh Nigam; Sakshi Goel; Shannon Carskadon; Nilesh Gupta; Apul Goel; Nallasivam Palanisamy; Bushra Ateeq
Journal:  Clin Cancer Res       Date:  2018-12-26       Impact factor: 12.531

8.  Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-Low Induction of Therapy Resistance.

Authors:  Kellie A Cotter; John Gallon; Nadine Uebersax; Philip Rubin; Kate D Meyer; Salvatore Piscuoglio; Samie R Jaffrey; Mark A Rubin
Journal:  Mol Cancer Res       Date:  2021-06-04       Impact factor: 6.333

Review 9.  Molecular Underpinnings Governing Genetic Complexity of ETS-Fusion-Negative Prostate Cancer.

Authors:  Vipul Bhatia; Bushra Ateeq
Journal:  Trends Mol Med       Date:  2019-07-25       Impact factor: 11.951

Review 10.  Transcriptional programmes underlying cellular identity and microbial responsiveness in the intestinal epithelium.

Authors:  Jennifer K Heppert; James M Davison; Cecelia Kelly; Gilberto Padilla Mercado; Colin R Lickwar; John F Rawls
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2020-10-06       Impact factor: 46.802

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