Literature DB >> 29687580

The power and potential of genomics in weed biology and management.

Karl Ravet1, Eric L Patterson1, Hansjörg Krähmer2, Kateřina Hamouzová3, Longjiang Fan4, Marie Jasieniuk5, Amy Lawton-Rauh6, Jenna M Malone7, J Scott McElroy8, Aldo Merotto9, Philip Westra1, Christopher Preston7, Martin M Vila-Aiub10, Roberto Busi11, Patrick J Tranel12, Carl Reinhardt13, Christopher Saski14, Roland Beffa2, Paul Neve15, Todd A Gaines1.   

Abstract

There have been previous calls for, and efforts focused on, realizing the power and potential of weed genomics for better understanding of weeds. Sustained advances in genome sequencing and assembly technologies now make it possible for individual research groups to generate reference genomes for multiple weed species at reasonable costs. Here, we present the outcomes from several meetings, discussions, and workshops focused on establishing an International Weed Genomics Consortium (IWGC) for a coordinated international effort in weed genomics. We review the 'state of the art' in genomics and weed genomics, including technologies, applications, and on-going weed genome projects. We also report the outcomes from a workshop and a global survey of the weed science community to identify priority species, key biological questions, and weed management applications that can be addressed through greater availability of, and access to, genomic resources. Major focus areas include the evolution of herbicide resistance and weedy traits, the development of molecular diagnostics, and the identification of novel targets and approaches for weed management. There is increasing interest in, and need for, weed genomics, and the establishment of the IWGC will provide the necessary global platform for communication and coordination of weed genomics research.
© 2018 Society of Chemical Industry. © 2018 Society of Chemical Industry.

Keywords:  genomics; herbicide resistance; weed biology; weed evolution; weed management; weedy species

Mesh:

Year:  2018        PMID: 29687580     DOI: 10.1002/ps.5048

Source DB:  PubMed          Journal:  Pest Manag Sci        ISSN: 1526-498X            Impact factor:   4.845


  13 in total

1.  Genome-Guided Analysis of Seven Weed Species Reveals Conserved Sequence and Structural Features of Key Gene Targets for Herbicide Development.

Authors:  Sarah Shah; Thierry Lonhienne; Cody-Ellen Murray; Yibi Chen; Katherine E Dougan; Yu Shang Low; Craig M Williams; Gerhard Schenk; Gimme H Walter; Luke W Guddat; Cheong Xin Chan
Journal:  Front Plant Sci       Date:  2022-06-29       Impact factor: 6.627

Review 2.  Weed competitive ability in wheat: a peek through in its functional significance, present status and future prospects.

Authors:  Parampreet Kaur; Shephali Sachan; Achla Sharma
Journal:  Physiol Mol Biol Plants       Date:  2021-10-04

Review 3.  Biotechnological Road Map for Innovative Weed Management.

Authors:  Albert Chern Sun Wong; Karen Massel; Yasmine Lam; Jessica Hintzsche; Bhagirath Singh Chauhan
Journal:  Front Plant Sci       Date:  2022-04-25       Impact factor: 6.627

4.  The quick and the dead: a new model for the essential role of ABA accumulation in synthetic auxin herbicide mode of action.

Authors:  Todd A Gaines
Journal:  J Exp Bot       Date:  2020-06-22       Impact factor: 6.992

Review 5.  Omics Potential in Herbicide-Resistant Weed Management.

Authors:  Eric L Patterson; Christopher Saski; Anita Küpper; Roland Beffa; Todd A Gaines
Journal:  Plants (Basel)       Date:  2019-12-14

Review 6.  Turning Waste into Beneficial Resource: Implication of Ageratum conyzoides L. in Sustainable Agriculture, Environment and Biopharma Sectors.

Authors:  Suman Paul; Badal K Datta; Milind B Ratnaparkhe; Bhushan B Dholakia
Journal:  Mol Biotechnol       Date:  2021-10-10       Impact factor: 2.695

Review 7.  Gene drive systems: do they have a place in agricultural weed management?

Authors:  Paul Neve
Journal:  Pest Manag Sci       Date:  2018-09-17       Impact factor: 4.845

Review 8.  Population Genomic Approaches for Weed Science.

Authors:  Sara L Martin; Jean-Sebastien Parent; Martin Laforest; Eric Page; Julia M Kreiner; Tracey James
Journal:  Plants (Basel)       Date:  2019-09-19

Review 9.  The 21st Century Agriculture: When Rice Research Draws Attention to Climate Variability and How Weedy Rice and Underutilized Grains Come in Handy.

Authors:  Noraikim Mohd Hanafiah; Muhamad Shakirin Mispan; Phaik Eem Lim; Niranjan Baisakh; Acga Cheng
Journal:  Plants (Basel)       Date:  2020-03-16

10.  Draft Genomes of Amaranthus tuberculatus, Amaranthus hybridus, and Amaranthus palmeri.

Authors:  Jacob S Montgomery; Darci Giacomini; Bridgit Waithaka; Christa Lanz; Brent P Murphy; Ruth Campe; Jens Lerchl; Andreas Landes; Fanny Gatzmann; Antoine Janssen; Rudie Antonise; Eric Patterson; Detlef Weigel; Patrick J Tranel
Journal:  Genome Biol Evol       Date:  2020-11-03       Impact factor: 3.416

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