Literature DB >> 29687222

Trans-splicing of plastid rps12 transcripts, mediated by AtPPR4, is essential for embryo patterning in Arabidopsis thaliana.

Luca Tadini1, Roberto Ferrari1, Marie-Kristin Lehniger2, Chiara Mizzotti1, Fabio Moratti3, Francesca Resentini4, Monica Colombo5, Alex Costa1, Simona Masiero6, Paolo Pesaresi7.   

Abstract

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CONCLUSION: AtPPR4-mediated trans-splicing of plastid rps12 transcripts is essential for key embryo morphogenetic events such as development of cotyledons, determination of provascular tissue, and organization of the shoot apical meristem (SAM), but not for the formation of the protodermal layer. Members of the pentatricopeptide repeat (PPR) containing protein family have emerged as key regulators of the organelle post-transcriptional processing and to be essential for proper plant embryo development. In this study, we report the functional characterization of the AtPPR4 (At5g04810) gene encoding a plastid nucleoid PPR protein. In-situ hybridization analysis reveals the presence of AtPPR4 transcripts already at the transition stage of embryo development. As a consequence, embryos lacking the AtPPR4 protein arrest their development at the transition/early-heart stages and show defects in the determination of the provascular tissue and organization of SAM. This complex phenotype is due to the specific role of AtPPR4 in the trans-splicing of the plastid rps12 transcripts, as shown by northern and slot-blot hybridizations, and the consequent defect in 70S ribosome accumulation and plastid protein synthesis, in agreement with the role proposed for the maize orthologue, ZmPPR4.

Entities:  

Keywords:  Chloroplast; Embryo development; Pentatricopeptide repeat protein; Protein synthesis; RNA metabolism

Mesh:

Substances:

Year:  2018        PMID: 29687222     DOI: 10.1007/s00425-018-2896-8

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  37 in total

1.  Megadalton complexes in the chloroplast stroma of Arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering.

Authors:  Paul Dominic B Olinares; Lalit Ponnala; Klaas J van Wijk
Journal:  Mol Cell Proteomics       Date:  2010-04-26       Impact factor: 5.911

2.  Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.

Authors:  Shifeng Cheng; Bernard Gutmann; Xiao Zhong; Yongtao Ye; Mark F Fisher; Fengqi Bai; Ian Castleden; Yue Song; Bo Song; Jiaying Huang; Xin Liu; Xun Xu; Boon L Lim; Charles S Bond; Siu-Ming Yiu; Ian Small
Journal:  Plant J       Date:  2016-02       Impact factor: 6.417

3.  Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis.

Authors:  Sang-Dong Yoo; Young-Hee Cho; Jen Sheen
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 4.  Building a plant: cell fate specification in the early Arabidopsis embryo.

Authors:  Colette A ten Hove; Kuan-Ju Lu; Dolf Weijers
Journal:  Development       Date:  2015-02-01       Impact factor: 6.868

5.  SUPPRESSOR OF FRIGIDA (SUF4) Supports Gamete Fusion via Regulating Arabidopsis EC1 Gene Expression.

Authors:  Francesca Resentini; Philipp Cyprys; Joshua G Steffen; Svenja Alter; Piero Morandini; Chiara Mizzotti; Alan Lloyd; Gary N Drews; Thomas Dresselhaus; Lucia Colombo; Stefanie Sprunck; Simona Masiero
Journal:  Plant Physiol       Date:  2016-12-05       Impact factor: 8.340

6.  Role of PHABULOSA and PHAVOLUTA in determining radial patterning in shoots.

Authors:  J R McConnell; J Emery; Y Eshed; N Bao; J Bowman; M K Barton
Journal:  Nature       Date:  2001-06-07       Impact factor: 49.962

7.  Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.

Authors:  Nicole Bryant; Johnny Lloyd; Colleen Sweeney; Fumiyoshi Myouga; David Meinke
Journal:  Plant Physiol       Date:  2010-12-07       Impact factor: 8.340

8.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

Review 9.  Chloroplast signaling within, between and beyond cells.

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Journal:  Front Plant Sci       Date:  2015-10-06       Impact factor: 5.753

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Authors:  Chiara Mizzotti; Bianca M Galliani; Ludovico Dreni; Hans Sommer; Aureliano Bombarely; Simona Masiero
Journal:  Sci Rep       Date:  2017-02-01       Impact factor: 4.379

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  10 in total

Review 1.  The plastid transcription machinery and its coordination with the expression of nuclear genome: Plastid-Encoded Polymerase, Nuclear-Encoded Polymerase and the Genomes Uncoupled 1-mediated retrograde communication.

Authors:  Luca Tadini; Nicolaj Jeran; Carlotta Peracchio; Simona Masiero; Monica Colombo; Paolo Pesaresi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-05-04       Impact factor: 6.237

2.  Characteristics analysis of the complete Wurfbainia villosa chloroplast genome.

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Journal:  Physiol Mol Biol Plants       Date:  2020-03-19

3.  Rerouting of ribosomal proteins into splicing in plant organelles.

Authors:  Chuande Wang; Rachel Fourdin; Martine Quadrado; Céline Dargel-Graffin; Dimitri Tolleter; David Macherel; Hakim Mireau
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-09       Impact factor: 11.205

Review 4.  Functioning of PPR Proteins in Organelle RNA Metabolism and Chloroplast Biogenesis.

Authors:  Xinwei Wang; Yaqi An; Pan Xu; Jianwei Xiao
Journal:  Front Plant Sci       Date:  2021-02-09       Impact factor: 5.753

Review 5.  Functions of PPR Proteins in Plant Growth and Development.

Authors:  Xiulan Li; Mengdi Sun; Shijuan Liu; Qian Teng; Shihui Li; Yueshui Jiang
Journal:  Int J Mol Sci       Date:  2021-10-19       Impact factor: 5.923

6.  The origin and evolution of a two-component system of paralogous genes encoding the centromeric histone CENH3 in cereals.

Authors:  Evgeny A Elisafenko; Elena V Evtushenko; Alexander V Vershinin
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7.  Chloroplastic pentatricopeptide repeat proteins (PPR) in albino plantlets of Agave angustifolia Haw. reveal unexpected behavior.

Authors:  M Andrade-Marcial; R Pacheco-Arjona; E Góngora-Castillo; C De-la-Peña
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8.  A chloroplast-localized pentatricopeptide repeat protein involved in RNA editing and splicing and its effects on chloroplast development in rice.

Authors:  Yanwei Wang; Zhimin Yang; Meng Zhang; Pengfei Ai
Journal:  BMC Plant Biol       Date:  2022-09-13       Impact factor: 5.260

Review 9.  An Overview of Pentatricopeptide Repeat (PPR) Proteins in the Moss Physcomitrium patens and Their Role in Organellar Gene Expression.

Authors:  Mamoru Sugita
Journal:  Plants (Basel)       Date:  2022-08-31

10.  OsCAF2 contains two CRM domains and is necessary for chloroplast development in rice.

Authors:  Lan Shen; Qiang Zhang; Zhongwei Wang; Hongling Wen; Guanglian Hu; Deyong Ren; Jiang Hu; Li Zhu; Zhenyu Gao; Guangheng Zhang; Longbiao Guo; Dali Zeng; Qian Qian
Journal:  BMC Plant Biol       Date:  2020-08-18       Impact factor: 4.215

  10 in total

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