Literature DB >> 29677570

Covalently circularized nanodiscs; challenges and applications.

Mahmoud L Nasr1, Gerhard Wagner2.   

Abstract

Covalently circularized nanodiscs (cNDs) represent a significant advance in the durability and applicability of nanodisc technology. The new cNDs demonstrate higher size homogeneity and improved stability compared with that of non-circularized forms. Moreover, cNDs can be prepared at various defined sizes up to 80-nm diameter. The large cNDs can house much larger membrane proteins and their complexes than was previously possible with the conventional nanodiscs. In order to experience the full advantages of covalent circularization, high quality circularized scaffold protein and nanodisc samples are needed. Here, we give a concise overview and discuss the technical challenges that needed to be overcome in order to obtain high quality preparations. Furthermore, we review some potential new applications for the cNDs.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 29677570      PMCID: PMC6192853          DOI: 10.1016/j.sbi.2018.03.014

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  32 in total

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Journal:  FEBS Lett       Date:  1999-10-08       Impact factor: 4.124

2.  A straight path to circular proteins.

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Journal:  J Biol Chem       Date:  2009-04-09       Impact factor: 5.157

3.  A general strategy for the evolution of bond-forming enzymes using yeast display.

Authors:  Irwin Chen; Brent M Dorr; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-22       Impact factor: 11.205

4.  Sortase-catalyzed transformations that improve the properties of cytokines.

Authors:  Maximilian W Popp; Stephanie K Dougan; Tzu-Ying Chuang; Eric Spooner; Hidde L Ploegh
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-04       Impact factor: 11.205

5.  Solution structure of discoidal high-density lipoprotein particles with a shortened apolipoprotein A-I.

Authors:  Stefan Bibow; Yevhen Polyhach; Cédric Eichmann; Celestine N Chi; Julia Kowal; Stefan Albiez; Robert A McLeod; Henning Stahlberg; Gunnar Jeschke; Peter Güntert; Roland Riek
Journal:  Nat Struct Mol Biol       Date:  2016-12-26       Impact factor: 15.369

6.  Sortase A-catalyzed peptide cyclization for the synthesis of macrocyclic peptides and glycopeptides.

Authors:  Zhimeng Wu; Xueqing Guo; Zhongwu Guo
Journal:  Chem Commun (Camb)       Date:  2011-07-08       Impact factor: 6.222

7.  Butelase 1 is an Asx-specific ligase enabling peptide macrocyclization and synthesis.

Authors:  Giang K T Nguyen; Shujing Wang; Yibo Qiu; Xinya Hemu; Yilong Lian; James P Tam
Journal:  Nat Chem Biol       Date:  2014-07-20       Impact factor: 15.040

8.  Covalently circularized nanodiscs for studying membrane proteins and viral entry.

Authors:  Mahmoud L Nasr; Diego Baptista; Mike Strauss; Zhen-Yu J Sun; Simina Grigoriu; Sonja Huser; Andreas Plückthun; Franz Hagn; Thomas Walz; James M Hogle; Gerhard Wagner
Journal:  Nat Methods       Date:  2016-11-21       Impact factor: 28.547

Review 9.  Recombinant expression of backbone-cyclized polypeptides.

Authors:  Radhika Borra; Julio A Camarero
Journal:  Biopolymers       Date:  2013-09       Impact factor: 2.505

10.  Intein-mediated backbone cyclization of VP1 protein enhanced protection of CVB3-induced viral myocarditis.

Authors:  Xingmei Qi; Sidong Xiong
Journal:  Sci Rep       Date:  2017-02-02       Impact factor: 4.379

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  9 in total

1.  DNA-Corralled Nanodiscs for the Structural and Functional Characterization of Membrane Proteins and Viral Entry.

Authors:  Zhao Zhao; Meng Zhang; James M Hogle; William M Shih; Gerhard Wagner; Mahmoud L Nasr
Journal:  J Am Chem Soc       Date:  2018-08-16       Impact factor: 15.419

2.  Reverse Micelle Encapsulation of Proteins for NMR Spectroscopy.

Authors:  Brian Fuglestad; Bryan S Marques; Christine Jorge; Nicole E Kerstetter; Kathleen G Valentine; A Joshua Wand
Journal:  Methods Enzymol       Date:  2018-12-10       Impact factor: 1.600

Review 3.  Structural Insights from HIV-Antibody Coevolution and Related Immunization Studies.

Authors:  Jeffrey O Zhou; Therese Ton; Julia W Morriss; Diep Nguyen; Daniela Fera
Journal:  AIDS Res Hum Retroviruses       Date:  2018-08-15       Impact factor: 2.205

4.  Dark, Ultra-Dark and Ultra-Bright Nanodiscs for membrane protein investigations.

Authors:  Mark A McLean; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar
Journal:  Anal Biochem       Date:  2020-08-01       Impact factor: 3.365

5.  Magnetic Alignment of Polymer Nanodiscs Probed by Solid-State NMR Spectroscopy.

Authors:  Thirupathi Ravula; JaeWoong Kim; Dong-Kuk Lee; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2020-01-30       Impact factor: 3.882

Review 6.  Nanodiscs: A toolkit for membrane protein science.

Authors:  Stephen G Sligar; Ilia G Denisov
Journal:  Protein Sci       Date:  2020-11-16       Impact factor: 6.993

Review 7.  Biophysical Characterization of Membrane Proteins Embedded in Nanodiscs Using Fluorescence Correlation Spectroscopy.

Authors:  Matthew J Laurence; Timothy S Carpenter; Ted A Laurence; Matthew A Coleman; Megan Shelby; Chao Liu
Journal:  Membranes (Basel)       Date:  2022-03-31

Review 8.  Advances in methods for atomic resolution macromolecular structure determination.

Authors:  Michael C Thompson; Todd O Yeates; Jose A Rodriguez
Journal:  F1000Res       Date:  2020-07-02

Review 9.  Lipid nanoparticle technologies for the study of G protein-coupled receptors in lipid environments.

Authors:  Steven Lavington; Anthony Watts
Journal:  Biophys Rev       Date:  2020-11-19
  9 in total

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