| Literature DB >> 29662005 |
Janet E Del Bene1, José Elguero2, Ibon Alkorta3.
Abstract
Ab initio MP2/aug'-cc-pVTZ calculations have been performed to investigate the complexes of CO₂ with theEntities:
Keywords: IR spectra; azoles; carbon dioxide; hydrogen bond; spin-spin coupling constants; tetrel bond
Mesh:
Substances:
Year: 2018 PMID: 29662005 PMCID: PMC6017967 DOI: 10.3390/molecules23040906
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1The ten azoles and their codes.
Scheme 2Relevant experimentally-determined complexes.
Names of CO2:azole complexes, their binding energies (−ΔE, kJ·mol−1) and symmetries.
| Azole | Complex | −ΔE | Sym |
|---|---|---|---|
| pyrrole | 1H-pyrr | 10.1 | |
| pyrazole | 1H-pyra-12 | 22.7 | |
| imidazole | 1H-imid-23 | 19.9 | |
| 1H-imid | 11.2 | ||
| triazoles | 1H-123tri-12 | 21.8 | |
| 2H-123tri-12 | 20.3 | ||
| 1H-123tri-23p | 15.8 | ||
| 1H-124tri-12 | 21.0 | ||
| 4H-124tri-12p | 18.1 | ||
| 1H-124tri-45 | 17.9 | ||
| 4H-124tri | 12.9 | ||
| tetrazoles | 1H-tet-12 | 20.3 | |
| 2H-tet-23 | 19.8 | ||
| 2H-tet-12 | 18.9 | ||
| 1H-tet-34p | 15.1 | ||
| 2H-tet-34p | 13.7 | ||
| 1H-tet-23p | 13.3 | ||
| pentazole | 1H-pent-12 | 19.0 | |
| 1H-pent | 17.6 | ||
| 1H-pent-34p | 12.2 | ||
| 1H-pent-23p | 11.2 |
Figure 1Representative tetrel- and hydrogen-bonded CO2:azole complexes.
Binding energies (−ΔE) and charge-transfer energies (kJ·mol−1), Nx-C, Ny-O’, Cy-O’ and H-O’ distances (R, Å) for planar CO2:azole complexes stabilized by Nx···C tetrel bonds.
| Azole | Complex | −ΔE | R(Nx-C) | R(Ny-O’); R(Cy-O’) a | R(NyH-O’); R(CyH-O’) a,b | Primary CT c | Secondary CT d |
|---|---|---|---|---|---|---|---|
| pyrazole | 1H-pyra-12 | 22.7 | N2: 2.801 | N1: 2.939 | 2.285 | 10.7 | 2.0 |
| imidazole | 1H-imid-23 | 19.9 | N3: 2.781 | C2: 3.171 | 13.4 | 1.0 d | |
| triazoles | 1H-123tri-12 | 21.8 | N2: 2.852 | N1: 2.918 | 2.250 | 7.6 | 6.1 |
| 2H-123tri-12 | 20.3 | N1: 2.859 | N2: 2.936 | 2.298 | 7.5 | 2.1 | |
| 1H-124tri-12 | 21.0 | N2: 2.859 | N1: 2.933 | 2.275 | 7.4 | 2.3 | |
| 1H-124tri-45 | 17.9 | N4: 2.832 | C5: 3.156 | 10.2 | 1.1 e | ||
| tetrazoles | 1H-tet-12 | 20.3 | N2: 2.933 | N1: 2.094 | 2.222 | 5.0 | 4.5 |
| 2H-tet-23 | 19.8 | N3: 2.917 | N2: 2.904 | 2.252 | 5.3 | 6.3 | |
| 2H-tet-12 | 18.9 | N1: 2.933 | N2: 2.917 | 2.264 | 5.3 | 2.6 | |
| pentazole | 1H-pent-12 | 19.0 | N2: 3.027 | N1: 2.878 | 2.197 | 3.1 | 4.7 |
a Ny-H or Cy-H is adjacent to Nx. b H-O’ distances involving Cy-H are given in italics. c Nxlp→σ*C-O. d O’lp→σ*Ny-H. e The charge-transfer is O’lp→σ*Cy-N1.
Figure 2Binding energies versus distance for the planar tetrel-bonded CO2:azole complexes. The solid symbols refer to the Nx-C distance; open symbols refer to the Ny-O’ distance in complexes with tetrazole and pentazole.
Figure 3Orbital descriptions of the primary and secondary charge-transfer interactions in 1H-imid-23 and 1H-pyra-12.
Figure 4Primary Nxlp→σ*C-O charge-transfer energies versus the Nx-C distance. The legend indicates the number of nitrogen atoms in the azole ring.
CO2 in-plane bending frequencies (ν), changes in these frequencies upon complexation (δν, cm−1), and spin-spin coupling constants 1tJ(Nx-C) and J(Ny-O’) (Hz) for planar CO2:azole complexes stabilized by Nx···C tetrel bonds.
| Azole | Complex | ν a | δν | 1tJ(Nx-C) | J(Ny-O’) |
|---|---|---|---|---|---|
| pyrazole | 1H-pyra-12 | 634 | −25.0 | 0.5 | 0.8 |
| imidazole | 1H-imid-23 | 628 | −30.5 | 0.6 | |
| triazoles | 1H-123tri-12 | 640 | −19.1 | 0.4 | 0.9 |
| 2H-123tri-12 | 641 | −18.4 | 0.3 | 1.0 | |
| 1H-124tri-12 | 640 | −19.3 | 0.3 | 0.9 | |
| 1H-124tri-45 | 636 | −23.4 | 0.4 | ||
| tetrazoles | 1H-tet-12 | 646 | −13.4 | 0.2 | 1.1 |
| 2H-tet-23 | 646 | −13.4 | 0.2 | 1.2 | |
| 2H-tet-12 | 646 | −12.9 | 0.1 | 1.1 | |
| pentazoles | 1H-pent-12 | 650 | −8.6 | 0.0 | 1.5 |
a The degenerate bending frequency of isolated CO2 is 659 cm−1.
Figure 5Absolute value of the change in the CO2 in-plane bending frequency upon complex formation versus the number of nitrogen atoms in the azole ring.
Binding energies (−ΔE) and charge-transfer energies (CT, kJ·mol−1), Nx-C and Ny-C distances (Å) and frequencies of bending vibration 1 (ν, cm−1) in perpendicular azole:CO2 complexes with tetrel bonds.
| Azole | Complex | −ΔE | R(Nx-C); R(Ny-C) a | CT b | υ c,d |
|---|---|---|---|---|---|
| triazoles | 1H-123tri-23p | 15.8 | N2: 2.994; N3: 2.938 | 4.4 | 645 |
| 4H-124tri-12p | 18.1 | N1: 2.922; N2: 2.922 | 5.6 | 644 | |
| tetrazoles | 1H-tet-34p | 15.1 | N3: 2.959; N4: 2.981 | 4.9 | 648 |
| 2H-tet-34p | 13.7 | N3: 3.021; N4: 2.967 | 4.2 | 647 | |
| 1H-tet-23p | 13.3 | N2: 3.088; N3:2.954 | 4.1 | 647 | |
| pentazoles | 1H-pent-34p | 12.2 | N3: 3.016; N4: 3.016 | 3.0 | 651 |
| 1H-pent-23p | 11.2 | N2: 3.113; N3: 2.939 | 2.5 | 650 |
a Two electron-donor N atoms that form the tetrel bond. b The charge transfer is (Nxlp + Nylp)→π*O-C-O. In the natural bond orbital (NBO) scheme, this is the sum of two charge-transfer interactions. c The degenerate bending vibrational frequency of isolated CO2 is 659 cm−1. d The bending vibrations are illustrated in Figure 7.
Figure 6Binding energies (solid symbols) and charge-transfer energies (open symbols) versus the number of N atoms in the azole rings.
Figure 7Representation of the two bending vibrations in the 1H-pent-34p complex.
Binding energies (−ΔE) and charge-transfer energies (kJ·mol−1), Nz-O and Nz-H distances (Å), changes in Nz-H stretching frequencies (δν, cm−1) and spin-spin coupling constants 2hJ(Nz-O) (Hz) for CO2:azole complexes stabilized by Nz-H···O hydrogen bonds.
| Azole | Complex | −ΔE | R(Nz-O) | Olp→σ*Nz-H | 2hJ(Nz-O) | R(Nz-H) | Δν(Nz-H) |
|---|---|---|---|---|---|---|---|
| pyrrole | 1H-pyrr | 10.1 | 3.175 | 8.7 | 2.1 | 1.006 | −5.1 |
| imidazole | 1H-imid | 11.2 | 3.152 | 10.1 | 2.2 | 1.007 | −8.8 |
| 124-triazole | 4H-124tri | 12.9 | 3.112 | 12.3 | 2.6 | 1.008 | −17.1 |
| pentazole | 1H-pent | 17.6 | 2.988 | 22.7 | 4.6 | 1.014 | −47.0 |
Figure 8Binding energies (solid symbols) and charge-transfer energies (open symbols) versus the Nz-O distance.