| Literature DB >> 29659538 |
Nicolette N Houreld1, Sandra M Ayuk2, Heidi Abrahamse3.
Abstract
Diabetes affects extracellular matrix (ECM) metabolism, contributing to delayed wound healing and lower limb amputation. Application of light (photobiomodulation, PBM) has been shown to improve wound healing. This study aimed to evaluate the influence of PBM on cell adhesion molecules (CAMs) in diabetic wound healing. Isolated human skin fibroblasts were grouped into a diabetic wounded model. A diode laser at 660 nm with a fluence of 5 J/cm² was used for irradiation and cells were analysed 48 h post-irradiation. Controls consisted of sham-irradiated (0 J/cm²) cells. Real-time reverse transcription (RT) quantitative polymerase chain reaction (qPCR) was used to determine the expression of CAM-related genes. Ten genes were up-regulated in diabetic wounded cells, while 25 genes were down-regulated. Genes were related to transmembrane molecules, cell–cell adhesion, and cell–matrix adhesion, and also included genes related to other CAM molecules. PBM at 660 nm modulated gene expression of various CAMs contributing to the increased healing seen in clinical practice. There is a need for new therapies to improve diabetic wound healing. The application of PBM alongside other clinical therapies may be very beneficial in treatment.Entities:
Keywords: diabetes; extracellular matrix; fibroblasts; laser; photobiomodulation; wound healing
Year: 2018 PMID: 29659538 PMCID: PMC5946107 DOI: 10.3390/cells7040030
Source DB: PubMed Journal: Cells ISSN: 2073-4409 Impact factor: 6.600
Laser parameters.
| Parameters | |
|---|---|
| Wavelength | 660 nm |
| Output power | 92.8 mW |
| Spot size | 9.1 cm2 |
| Output power density | 10.22 mW/cm2 |
| Fluence | 5 J/cm2 |
| Duration of irradiation | 8 min 9 s |
Functional CAM gene grouping.
| Pathway | Gene |
|---|---|
| Transmembrane Molecules | |
| Cell-Cell Adhesion | |
| Cell-Matrix Adhesion | |
| Other Adhesion Molecules | |
| Housekeeping genes |
Gene expression profile of CAMs in diabetic wounded human skin fibroblast cells irradiated at 660 nm with 5 J/cm2. * p ≤ 0.05; ** p ≤ 0.01; *** p ≤ 0.001.
| Gene Symbol | Description | Gene ID | Fold Difference 1 | Gene Function [ | |
|---|---|---|---|---|---|
|
| ADAM metallopeptidase with thrombospondin type 1 motif, 13 | 11093 | 0.91 | 0.589 | The enzyme encoded by this gene specifically cleaves von Willebrand Factor (vWF). |
|
| CD44 molecule (Indian blood group) | 960 | 0.53 | 0.049 * | The protein encoded by this gene is a cell-surface glycoprotein involved in cell-cell interactions, cell adhesion and migration. It is a receptor for hyaluronic acid (HA) and can also interact with other ligands, such as osteopontin, collagens, and matrix metalloproteinases (MMPs). |
|
| Cadherin 1, type 1, E-cadherin | 999 | 2.12 | 0.050 * | This gene encodes a classical cadherin of the cadherin superfamily, and is a cell-cell adhesion protein. |
|
| Catenin (cadherin-associated protein), alpha 1, 102 kDa | 1495 | 0.83 | 0.340 | This gene encodes a member of the catenin family of proteins that play an important role in cell adhesion process by connecting cadherins located on the plasma membrane to the actin filaments inside the cell. |
|
| Catenin (cadherin-associated protein), beta 1, 88 kDa | 1499 | 0.64 | 0.084 | The protein encoded by this gene is part of a complex of proteins that constitute adherens junctions, which are necessary for the creation and maintenance of epithelial cell layers by regulating cell growth and adhesion between cells. They also anchor the actin cytoskeleton and may be responsible for transmitting the contact inhibition signal that causes cells to stop dividing once the epithelial sheet is complete. |
|
| Catenin (cadherin-associated protein), delta 1 | 1500 | 0.36 | 0.005 ** | This gene encodes a member of the Armadillo protein family, which function in adhesion between cells and signal transduction. |
|
| Catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) | 1501 | 2.72 | 0.052 | This gene encodes an adhesive junction associated protein of the armadillo/beta-catenin superfamily. The protein also promotes the disruption of E-cadherin based adherens junction to favour cell spreading upon stimulation by hepatocyte growth factor. |
|
| C-type lectin domain family 3, member B | 7123 | 1.14 | 0.749 | This gene codes for the protein tetranectin which may be involved in the packaging of molecules destined for exocytosis. |
|
| Contactin 1 | 1272 | 2.19 | 0.041 * | The protein encoded by this gene is a member of the immunoglobulin superfamily. It is a glycosyl-phosphatidylinositol (GPI)-anchored neuronal membrane protein that functions as a cell adhesion molecule. |
|
| Connective tissue growth factor | 1490 | 1.10 | 0.521 | The protein encoded by this gene is a mitogen that is secreted by vascular endothelial cells. The encoded protein plays a role in chondrocyte proliferation and differentiation, cell adhesion in many cell types, and is related to platelet-derived growth factor. |
|
| Collagen, type V, alpha 1 | 1289 | 0.56 | 0.036 * | This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Type V collagen is found in tissues containing type I collagen and appears to regulate the assembly of heterotypic fibbers composed of both type I and type V collagen. This gene product is closely related to type XI collagen and it is possible that the collagen chains of types V and XI constitute a single collagen type with tissue-specific chain combinations. |
|
| Collagen, type VI, alpha 1 | 1291 | 0.64 | 0.015 * | The basic structural unit of collagen VI is a heterotrimer of the alpha1(VI), alpha2(VI), and alpha3(VI) chains. The protein encoded by this gene is the alpha 1 subunit of type VI collagen (alpha1(VI) chain). Collagen VI is a major structural component of microfibrils. |
|
| Collagen, type VI, alpha 2 | 1292 | 0.58 | 0.014 * | The protein encoded by this gene is the alpha 2 subunit of type VI collagen (alpha2(VI) chain). Type VI collagen is a beaded filament collagen found in most connective tissues. The product of this gene contains several domains similar to von Willebrand Factor type A domains. These domains have been shown to bind ECM proteins, which explains the importance of this collagen in organizing matrix components. |
|
| Collagen, type VII, alpha 1 | 1294 | 0.36 | 0.017 * | This gene encodes the alpha 1 subunit of type VII collagen. Type VII collagen fibril, composed of three identical alpha collagen chains, is restricted to the basement zone and functions as an anchoring fibril between the external epithelia and the underlying stroma. |
|
| Collagen, type VIII, alpha 1 | 1295 | 0.71 | 0.271 | This gene encodes the alpha 1 subunit (one of two alpha chains) of type VIII collagen. The gene product is a short chain collagen and a major component of the basement membrane of the corneal endothelium. |
|
| Collagen, type XI, alpha 1 | 1301 | 3.68 | 0.002 ** | This gene encodes the alpha 1 subunit (one of two chains) of type XI collagen, a minor fibrillar collagen. |
|
| Collagen, type XII, alpha 1 | 1303 | 0.37 | 0.003 ** | This gene encodes the alpha 1 subunit of type XII collagen, a member of the FACIT (fibril-associated collagens with interrupted triple helices) collagen family. Type XII collagen is a homotrimer found in association with type I collagen, an association that is thought to modify the interactions between collagen I fibrils and the surrounding matrix. |
|
| Collagen, type XIV, alpha 1 | 7373 | 1.24 | 0.023 * | This gene encodes the alpha 1 subunit of type XIV collagen, a member of the FACIT collagen family. Type XIV collagen interacts with the fibril surface and is involved in the regulation of fibrillogenesis. |
|
| Collagen, type XV, alpha 1 | 1306 | 0.67 | 0.082 | This gene encodes the alpha 1 subunit of type XV collagen, a member of the FACIT collagen family. Type XV collagen has a wide tissue distribution but the strongest expression is localized to basement membrane zones so it may function to adhere basement membranes to underlying connective tissue stroma. |
|
| Collagen, type XVI, alpha 1 | 1307 | 0.61 | 0.001 ** | This gene encodes the alpha 1 subunit of type XVI collagen, a member of the FACIT collagen family. Members of this collagen family are found in association with fibril-forming collagens such as type I and II, and serve to maintain the integrity of the ECM. |
|
| Fibronectin 1 | 2335 | 0.58 | 0.008 ** | This gene encodes fibronectin, a glycoprotein present in a dimeric or multimeric form at the cell surface and in ECM. The encoded preproprotein is proteolytically processed to generate the mature protein. Fibronectin is involved in cell adhesion and migration processes including wound healing. |
|
| Hyaluronan synthase 1 | 3036 | 0.87 | 0.544 | Hyaluronan or hyaluronic acid (HA) is a polysaccharide and is a constituent of the ECM. It serves a variety of functions, including space filling, lubrication of joints, and provision of a matrix through which cells can migrate. HA is actively produced during wound healing and tissue repair to provide a framework for ingrowth of blood vessels and fibroblasts. HA is synthesized by membrane-bound synthase at the inner surface of the plasma membrane. |
|
| Intercellular adhesion molecule 1 | 3383 | 0.97 | 0.843 | This gene encodes a cell surface glycoprotein which is typically expressed on endothelial cells and cells of the immune system. It binds to integrins of type CD11a/CD18, or CD11b/CD18. |
|
| Integrin, alpha 1 | 3672 | 0.97 | 0.721 | This gene encodes the alpha 1 subunit of integrin receptors. This protein heterodimerizes with the beta 1 subunit to form a cell-surface receptor for collagen and laminin. The heterodimeric receptor is involved in cell-cell adhesion and may play a role in inflammation and fibrosis. The alpha 1 subunit contains an inserted (I) von Willebrand factor type I domain which is thought to be involved in collagen binding. |
|
| Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | 3673 | 0.52 | 0.015 * | This gene encodes the alpha 2 subunit of a transmembrane receptor for collagens and related proteins. The encoded protein forms a heterodimer with a beta subunit and mediates the adhesion of platelets and other cell types to the ECM. |
|
| Integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) | 3675 | 0.50 | 0.010 ** | This gene encodes the alpha 3 subunit of integrin. Integrins are heterodimeric integral membrane proteins that function in cell surface adhesion, cytoskeletal rearrangement and cell signalling. This subunit joins with a beta 1 subunit to form an integrin that interacts with ECM proteins, including members of the laminin family. |
|
| Integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) | 3676 | 0.86 | 0.459 | This gene encodes for the alpha 4 subunit of the integrin alpha chain family. This subunit associates with a beta 1 or beta 7 subunit to form an integrin that may play a role in cell motility and migration. |
|
| Integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | 3678 | 0.54 | 0.004 ** | This gene encodes for the alpha 5 subunit of the integrin alpha chain family. This subunit associates with the beta 1 subunit to form a fibronectin receptor. |
|
| Integrin, alpha 6 | 3655 | 0.76 | 0.012 * | This gene encodes for the alpha 6 subunit of the integrin alpha chain family. This subunit may associate with a beta 1 or beta 4 subunit to form an integrin that interacts with ECM proteins including members of the laminin family. |
|
| Integrin, alpha 7 | 3679 | 1.11 | 0.513 | This gene encodes for the alpha 7 subunit of the integrin alpha chain family. This protein functions as a receptor for the basement membrane protein laminin-1. It is mainly expressed in skeletal and cardiac muscles and may be involved in differentiation and migration processes during myogenesis. |
|
| Integrin, alpha 8 | 8516 | 2.75 | 0.050 * | This gene encodes for the alpha 8 subunit of the heterodimeric integrin alpha8beta1 protein. The encoded protein is a single-pass type 1 membrane protein. This gene regulates the recruitment of mesenchymal cells into epithelial structures, mediates cell-cell interactions, and regulates neurite outgrowth of sensory and motor neurons. The integrin alpha8beta1 protein plays an important role in wound-healing and organogenesis. |
|
| Integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) | 3683 | 1.89 | 0.003 ** | This gene encodes the integrin alpha L chain. This I-domain containing alpha integrin combines with the beta 2 chain (ITGB2) to form the integrin lymphocyte function-associated antigen-1 (LFA-1). LFA-1 plays a central role in leukocyte intercellular adhesion through interactions with its ligands, ICAMs 1-3, and also functions in lymphocyte costimulatory signalling. |
|
| Integrin, alpha M (complement component 3 receptor 3 subunit) | 3684 | 1.77 | 0.065 | This gene encodes the integrin alpha M chain. This I-domain containing alpha integrin combines with the beta 2 chain (ITGB2) to form a leukocyte-specific integrin known as macrophage receptor 1 (‘Mac-1’), or inactivated-C3b (iC3b) receptor 3 (‘CR3’). The alpha M beta 2 integrin is important in the adherence of neutrophils and monocytes to stimulated endothelium, and also in the phagocytosis of complement coated particles. |
|
| Integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) | 3685 | 0.50 | 0.002 ** | The product of this gene belongs to the integrin alpha chain family. This subunit associates with beta 1, beta 3, beta 5, beta 6 and beta 8 subunits. The heterodimer consisting of alpha V and beta 3 subunits is also known as the vitronectin receptor. This integrin may regulate angiogenesis. |
|
| Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 3688 | 0.53 | 0.005 ** | The product of this gene belongs to the integrin beta chain family; integrin beta chains combine with multiple different alpha chains to form different integrin heterodimers. The ITGB1 protein product is the integrin beta chain beta 1. Integrin family members are noncovalently associated transmembrane glycoprotein receptors involved in cell adhesion and recognition in a variety of processes including embryogenesis, hemostasis, tissue repair, and immune response. |
|
| Integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) | 3689 | 1.58 | 0.083 | The ITGB2 protein product is the integrin beta chain beta 2. The encoded protein plays an important role in immune response. |
|
| Integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) | 3690 | 0.58 | 0.006 ** | The ITGB3 protein product is the integrin beta chain beta 3. Integrin beta 3 is found along with the alpha IIb chain in platelets. |
|
| Integrin, beta 4 | 3691 | 1.87 | 0.041 * | This gene encodes the integrin beta 4 subunit, a receptor for the laminins. |
|
| Integrin, beta 5 | 3693 | 0.97 | 0.879 | This gene encodes the integrin subunit beta 5, and is involved in adhesion to vitronectin. |
|
| Kallmann syndrome 1 sequence | 3730 | 0.41 | 0.001 *** | Also known as the ANOS1 gene. The protein encoded for by this gene is a cell surface protein, which is N-glycosylated and may have anti-protease activity. |
|
| Laminin, alpha 1 | 284217 | 0.60 | 0.014 * | This gene encodes one of the alpha 1 subunits of laminin. Laminins are a family of ECM glycoproteins that have a heterotrimeric structure consisting of an alpha, beta and gamma chain which are bound to each other by disulphide bonds into a cross-shaped molecule. These proteins make up a major component of the basement membrane and have been implicated in a variety of biological processes including cell adhesion, differentiation, migration, and signalling. |
|
| Laminin, alpha 2 | 3908 | 1.17 | 0.396 | This gene encodes the alpha 2 chain, which constitutes one of the subunits of laminin 2 (merosin) and laminin 4 (s-merosin). |
|
| Laminin, alpha 3 | 3909 | 2.25 | 0.031 * | This gene encodes the alpha 3 chain of laminins. Laminins are essential for formation and function of the basement membrane. This gene is responsive to several epithelial-mesenchymal regulators including keratinocyte growth factor, epidermal growth factor and insulin-like growth factor. |
|
| Laminin, beta 1 | 3912 | 0.95 | 0.609 | This gene encodes the beta chain isoform laminin, beta 1. |
|
| Laminin, beta 3 | 3914 | 0.61 | 0.010 ** | The product encoded by this gene is a beta subunit laminin, which together with an alpha and a gamma subunit, forms laminin-5 |
|
| Laminin, gamma 1 (formerly LAMB2) | 3915 | 0.54 | 0.008 ** | This gene encodes the gamma chain isoform laminin, gamma 1. Embryos of transgenic mice in which both alleles of the gamma 1 chain gene were inactivated by homologous recombination, lacked basement membranes, indicating that laminin, gamma 1 chain is necessary for laminin heterotrimer assembly. |
|
| Matrix metallopeptidase 14 (membrane-inserted) | 4323 | 0.44 | 0.016 * | Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of ECM in normal physiological processes, such as tissue remodelling. The protein encoded by this gene is a member of the membrane-type MMP (MT-MMP) subfamily; each member of this subfamily contains a potential transmembrane domain suggesting that these proteins are expressed at the cell surface rather than secreted. |
|
| Matrix metallopeptidase 15 (membrane-inserted) | 4324 | 1.24 | 0.157 | This gene encodes a member of the peptidase M10 family and membrane-type subfamily of MMPs. |
|
| Matrix metallopeptidase 16 (membrane-inserted) | 4325 | 0.44 | 0.003 ** | Most MMP’s are secreted as inactive pro-proteins which are activated when cleaved by extracellular proteinases. The protein encoded by this gene is a member of the MT-MMP subfamily and activates MMP2 by cleavage. |
|
| Neural cell adhesion molecule 1 | 4684 | 0.97 | 0.811 | This gene encodes a cell adhesion protein which is a member of the immunoglobulin superfamily. The encoded protein is involved in cell-to-cell interactions as well as cell-matrix interactions during development and differentiation. The encoded protein has been shown to be involved in development of the nervous system, and for cells involved in the expansion of T cells and dendritic cells which play an important role in immune surveillance. |
|
| Platelet/endothelial cell adhesion molecule | 5175 | 3.66 | 0.213 | The protein encoded by this gene is found on the surface of platelets, monocytes, neutrophils, and some types of T-cells, and makes up a large portion of endothelial cell intercellular junctions. The encoded protein is a member of the immunoglobulin superfamily and is likely involved in leukocyte migration, angiogenesis, and integrin activation. |
|
| Selectin E | 6401 | 1.50 | 0.078 | The protein encoded by this gene is part of the selectin family of cell adhesion molecules, and is found in cytokine-stimulated endothelial cells and is thought to be responsible for the accumulation of blood leukocytes at sites of inflammation by mediating the adhesion of cells to the vascular lining. |
|
| Selectin L | 6402 | 2.36 | 0.013 * | This gene encodes a cell surface adhesion molecule that belongs to a family of adhesion/homing receptors. |
|
| Selectin P (granule membrane protein 140 kDa, antigen CD62) | 6403 | 1.90 | 0.249 | This protein redistributes to the plasma membrane during platelet activation and degranulation and mediates the interaction of activated endothelial cells or platelets with leukocytes. |
|
| Sarcoglycan, epsilon | 8910 | 0.93 | 0.657 | This gene encodes the epsilon member of the sarcoglycan family. Sarcoglycans are transmembrane proteins that are components of the dystrophin-glycoprotein complex, which link the actin cytoskeleton to the ECM. |
|
| Spastic paraplegia 7 (pure and complicated autosomal recessive) | 6687 | 0.48 | 0.005 ** | This gene encodes a mitochondrial metalloprotease protein that is a member of the AAA family. Members of this protein family share an ATPase domain and have roles in diverse cellular processes including membrane trafficking, intracellular motility, organelle biogenesis, protein folding, and proteolysis. |
|
| Secreted phosphoprotein 1 | 6696 | 0.58 | 0.009 ** | The protein encoded by this gene is involved in the attachment of osteoclasts to the mineralized bone matrix. This protein is also a cytokine that upregulates expression of interferon-gamma and interleukin-12. |
|
| Thrombospondin 1 | 7057 | 0.35 | 0.001 *** | The protein encoded by this gene is a subunit of a disulphide-linked homotrimeric protein, and belongs to the thrombospondin family. This protein is an adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. This protein can bind to fibrinogen, fibronectin, laminin, type V collagen and integrins alpha-V/beta-1. |
|
| Thrombospondin 2 | 7058 | 0.81 | 0.088 | The protein encoded by this gene belongs to the thrombo-spondin family. |
|
| Thrombospondin 3 | 7059 | 1.03 | 0.794 | The protein encoded by this gene belongs to the thrombo-spondin family. |
|
| Tenascin C | 3371 | 1.18 | 0.492 | This gene encodes for an ECM protein. |
|
| Vascular cell adhesion molecule 1 | 7412 | 1.79 | 0.002 ** | This gene is a member of the Ig superfamily and encodes a cell surface sialoglycoprotein expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction. |
|
| Versican | 1462 | 0.96 | 0.775 | This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulphate proteoglycan and is a major component of the ECM. This protein is involved in cell adhesion, proliferation, migration and angiogenesis and plays a central role in tissue morphogenesis and maintenance. |
|
| Vitronectin | 7448 | 1.20 | 0.240 | The protein encoded by this gene is a member of the pexin family. It is found in serum and tissues and promotes cell adhesion and spreading, inhibits the membrane-damaging effect of the terminal cytolytic complement pathway, and binds to several serpin serine protease inhibitors. |
1 A fold difference > 1 is considered as gene up-regulation, while a fold difference <1 is considered as gene down-regulation.
Figure 1Significant down-regulation (fold difference <1) of genes related to CAMs in diabetic wounded cells irradiated with 660 nm at 5 J/cm2.
Figure 2Significant up-regulation (fold difference >1) of genes related to CAMs in diabetic wounded cells irradiated with 660 nm at 5 J/cm2.