| Literature DB >> 29656574 |
Marion Pupier1, Jean-Marc Nuzillard2, Julien Wist3, Nils E Schlörer4, Stefan Kuhn4, Mate Erdelyi5, Christoph Steinbeck6, Antony J Williams7, Craig Butts8, Tim D W Claridge9, Bozhana Mikhova10, Wolfgang Robien11, Hesam Dashti12, Hamid R Eghbalnia12, Christophe Farès13, Christian Adam14, Pavel Kessler15, Fabrice Moriaud16, Mikhail Elyashberg17, Dimitris Argyropoulos18, Manuel Pérez19, Patrick Giraudeau20,21, Roberto R Gil22, Paul Trevorrow23, Damien Jeannerat1.
Abstract
Even though NMR has found countless applications in the field of small molecule characterization, there is no standard file format available for the NMR data relevant to structure characterization of small molecules. A new format is therefore introduced to associate the NMR parameters extracted from 1D and 2D spectra of organic compounds to the proposed chemical structure. These NMR parameters, which we shall call NMReDATA (for nuclear magnetic resonance extracted data), include chemical shift values, signal integrals, intensities, multiplicities, scalar coupling constants, lists of 2D correlations, relaxation times, and diffusion rates. The file format is an extension of the existing Structure Data Format, which is compatible with the commonly used MOL format. The association of an NMReDATA file with the raw and spectral data from which it originates constitutes an NMR record. This format is easily readable by humans and computers and provides a simple and efficient way for disseminating results of structural chemistry investigations, allowing automatic verification of published results, and for assisting the constitution of highly needed open-source structural databases.Entities:
Keywords: Automatic structure verification; NMR; NMR record; NMReDATA; computer-assisted structure elucidation (CASE); data format; database; extracted data
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Year: 2018 PMID: 29656574 PMCID: PMC6226248 DOI: 10.1002/mrc.4737
Source DB: PubMed Journal: Magn Reson Chem ISSN: 0749-1581 Impact factor: 2.447