| Literature DB >> 29654048 |
Nicole L Pratt1, Mhairi Kerr1, John D Barratt1, Anna Kemp-Casey1, Lisa M Kalisch Ellett1, Emmae Ramsay1, Elizabeth Ellen Roughead1.
Abstract
OBJECTIVES: To provide a map of Anatomical Therapeutic Chemical (ATC) Classification System codes to individual Rx-Risk comorbidities and to validate the Rx-Risk Comorbidity Index.Entities:
Keywords: chronic disease burden; claims data; comorbidity; model validation; mortality prediction; weighting
Mesh:
Year: 2018 PMID: 29654048 PMCID: PMC5905736 DOI: 10.1136/bmjopen-2017-021122
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
List of Rx-risk comorbidity categories, corresponding Anatomical Therapeutic Chemical (ATC) codes, and score weightings in relation to 1-year mortality risk in Department of Veterans’ Affairs (DVA) and Pharmaceutical Benefits Scheme (PBS) data.
| Rx-risk comorbidity category | ATC codes | DVA data | |
| N (%) | Weights for Rx-Risk Score | ||
| Alcohol dependency | N07BB01–N07BB99 | 183 (0.1) | 6 |
| Allergies | R01AC01–R01AD60, R06AD02–R06AX27, R06AB04 | 16 684 (12) | −1 |
| Anticoagulants | B01AA03–B01AB06, B01AE07, B01AF01, B01AF02, B01AX05 | 24 863 (18) | 1 |
| Antiplatelets | B01AC04–B01AC30 | 52 525 (39) | 2 |
| Anxiety | N05BA01–N05BA12, N05BE01 | 15 615 (12) | 1 |
| Arrhythmia | C01AA05, C01BA01–C01BD01, C07AA07 | 14 992 (11) | 2 |
| Benign prostatic hyperplasia | G04CA01–G04CA99, G04CB01, G04CB02* | 9003 (7) | 0 |
| Bipolar disorder | N05AN01 | 231 (0.2) | −1 |
| Chronic airways disease | R03AC02–R03DC03, R03DX05 | 33 244 (25) | 2 |
| Congestive heart failure | C03DA02–C03DA99, C07AB02—if PBS item code is 8732N, 8733P, 8734Q, 8735R, C07AB07, C07AG02, C07AB12, C03DA04 (C03CA01–C03CC01 and C09AA01–C09AX99, C09CA01–C09CX99)† | 23 975 (8) | 2 |
| Dementia | N06DA02–N06DA04, N06DX01 | 3868 (3) | 2 |
| Depression | N06AA01–N06AG02, N06AX03–N06AX11, N06AX13–N06AX18, N06AX21–N06AX26 | 43 354 (32) | 2 |
| Diabetes | A10AA01–A10BX99 | 17 550 (13) | 2 |
| Epilepsy | N03AA01–N03AX99 | 15 484 (11) | 0 |
| Glaucoma | S01EA01–S01EB03, S01EC03–S01EX99 | 16 262 (12) | 0 |
| Gastrooesophageal reflux disease | A02BA01–A02BX05 | 69 358 (51) | 0 |
| Gout | M04AA01–M04AC01 | 13 723 (10) | 1 |
| Hepatitis B | J05AF08, J05AF10, J05AF11 | 7 (0.01) | NA |
| Hepatitis C | J05AB54, L03AB10, L03AB11, L03AB60, L03AB61, J05AE14, J05AE11–J05AE12, J05AX14, J05AX15, J05AX65, J05AB04 | 1 (0.0) | NA |
| HIV | J05AE01–J05AE10, J05AF12–J05AG05, J05AR01–J05AR99, J05AX07–J05AX09, J05AX12, J05AF01–J05AF07, J05AF09 | 42 (0.03) | 0 |
| Hyperkalaemia | V03AE01 | 197 (0.2) | 4 |
| Hyperlipidaemia | A10BH03‡, C10AA01–C10BX09 | 67 690 (50) | −1 |
| Hypertension | C03AA01–C03BA11, C03DB01, C03DB99, C03EA01, C09BA02–C09BA09, C09DA02–C09DA08, C02AB01–C02AC05, C02DB02–C02DB99 (C03CA01–C03CCO1 or C09CA01–C09CX99)§ | 71 867 (53) | −1 |
| Hyperthyroidism | H03BA02, H03BB01 | 992 (1) | 2 |
| Hypothyroidism | H03AA01–H03AA02 | 13 438 (10) | 0 |
| Irritable bowel syndrome | A07EC01–A07EC04, A07EA01–A07EA02, A07EA06, L04AA33 | 1132 (1) | 0 |
| Ischaemic heart disease: angina | C01DA02–C01DA14, C01DX16, C08EX02 | 16 988 (13) | 2 |
| Ischaemic heart disease: hypertension | C07AA01–C07AA06, C07AA08–C07AB01, C07AB02—if PBS item code is not 8732N, 8733P, 8734Q, 8735R, C07AG01, C08CA01–C08DB01, C09DB01–C09DB04, C09DX01, C09BB02–C09BB10, C07AB03, C09DX03, C10BX03¶ | 49 947 (37) | −1 |
| Incontinence | G04BD01–G04BD99 | 5554 (4) | 0 |
| Inflammation/pain | M01AB01–M01AH06 | 23 510 (17) | –1 |
| Liver failure | A06AD11, A07AA11 | 5034 (4) | 3 |
| Malignancies | L01AA01–L01XX41 | 7689 (6) | 2 |
| Malnutrition | B05BA01–B05BA10 | 16 (0.01) | 0 |
| Migraine | N02CA01–N02CX01 | 708 (1) | −1 |
| Osteoporosis/Paget’s | M05BA01–M05BB05, M05BX03, M05BX04, G03XC01, H05AA02 | 21 448 (16) | −1 |
| Pain | N02AA01–N02AX02, N02AX06, N02AX52, N02BE51 | 44 035 (33) | 3 |
| Pancreatic insufficiency | A09AA02 | 433 (0.3) | 0 |
| Parkinson’s disease | N04AA01–N04BX02 | 4237 (3) | 3 |
| Psoriasis | D05AA01–D05AA99, D05BB01 D05BB02, D05AX02, D05AC01–D05AC51, D05AX52 | 1224 (1) | 0 |
| Psychotic illness | N05AA01–N05AB02, N05AB06–N05AL07, N05AX07–N05AX13 | 7714 (6) | 6 |
| Pulmonary hypertension | C02KX01–C02KX05, PBS item code 9547L, 9605M | 40 (0.03) | 6 |
| Renal disease | B03XA01–B03XA03, A11CC01–A11CC04, V03AE02, V03AE03, V03AE05 | 1816 (1) | 6 |
| Smoking cessation | N07BA01–N07BA03, N06AX12 | 1145 (1) | 6 |
| Steroid-responsive disease | H02AB01–H02AB10 | 19 106 (14) | 2 |
| Transplant | L04AA06, L04AA10, L04AA18, L04AD01, L04AD02 | 102 (0.1) | 0 |
| Tuberculosis | J04AC01–J04AC51, J04AM01–J04AM99 | 0 | NA |
*Benign prostatic hyperplasia medicines are tested for gender—must be male. Females suffering from bladder obstructions can be prescribed medicines used to treat benign prostatic hyperplasia.
†Must have at least two medicines prescribed with one of those medicines having an ATC code from C03CA01–C03CC01 and the other having an ATC code from either C09AA01–C09AX99 or C09CA01–C09CX99.
‡Combination product for hyperlipidaemia and diabetes.
§Can have medicine dispensed with an ATC code C03CA01–C03CC01 or C09AA01–C09AX99, but not both, as this would indicate chronic heart failure.
¶Combination product for hyperlipidaemia and ischaemic heart disease: hypertension.
N/A, not applicable.
Weighting algorithm used to score the Rx-Risk Index*
| Odds Ratio (OR) | P values | Weighted Rx-Risk Score |
| Any OR | >0.10 | 0 |
| <1 | ≤0.10 | −1 |
| 1.0≤ and <1.2 | ≤0.10 | 1 |
| 1.2≤ and <1.4 | ≤0.10 | 2 |
| 1.4≤ and <1.6 | ≤0.10 | 3 |
| 1.6≤ and <1.8 | ≤0.10 | 4 |
| 1.8≤ and <2.0 | ≤0.10 | 5 |
| ≥2.0 | ≤0.10 | 6 |
*Weights are based on the size of OR quantifying the probability of mortality in an outpatient population within 1 year, given treatment for a specified comorbidity.
Comparison of different Rx-risk scoring and modelling methods to predict 1-year mortality in the Department of Veterans’ Affairs (DVA) population and external validation using the Pharmaceutical Benefits Scheme (PBS) population
| Models | DVA | PBS | ||||||
| AIC* | Difference in AIC† | C-statistic‡ | Relative IDI, P values | AIC* | Difference in AIC† | C-statistic‡ | Relative IDI, P values | |
| Base model (BM): age and sex | 80 538.5 | – | 0.738 (0.734 to 0.742) | – | 79 527.9 | – | 0.761 (0.756 to 0.766) | – |
| Rx-risk measures | ||||||||
| BM+unweighted Rx-risk | 79 420.1 | 1118.4 | 0.751 (0.747 to 0.754) | 14.0%, <0.0001 | 77 029.9 | 2498.0 | 0.796 (0.791 to 0.800) | 25.5%, <0.0001 |
| BM+DVA-weighted Rx-risk | 76 102.4 | 4436.1 | 0.786 (0.782 to 0.789) | 65.6%, <0.0001 | 73 143.8 | 6384.1 | 0.833 (0.829 to 0.837) | 92.0%, <0.0001 |
| BM+43 comorbidity indicators | 75 692.2 | 4846.3 | 0.791 (0.788 to 0.795) | 73.9%, <0.0001 | 71 689.1 | 7838.8 | 0.845 (0.842 to 0.849) | 114.8%, <0.0001 |
| Crude measures | ||||||||
| BM+prescription count | 79 105.9 | 1432.6 | 0.755 (0.751 to 0.759) | 18.6%, <0.0001 | 76 762.8 | 2765.1 | 0.799 (0.795 to 0.804) | 31.4%, <0.0001 |
| BM+unique ATC§ medicine count | 78 374.5 | 2164.0 | 0.762 (0.758 to 0.766) | 29.4%, <0.0001 | 75 369.1 | 4158.8 | 0.814 (0.810 to 0.818) | 50.0%, <0.0001 |
| BM+unique PBS item code¶ medicine count | 78 210.2 | 2328.3 | 0.764 (0.760 to 0.768) | 32.1%, <0.0001 | 75 108.8 | 4419.1 | 0.816 (0.812 to 0.820) | 55.8%, <0.0001 |
*The model with the lowest AIC value is considered the best fit.
†AIC score compared with the AIC score of the base model. A model with a lower score of 10 (or more) is considered superior.
‡Possible range 0–1, with 1 indicating perfect prediction and 0.5 indicating chance prediction. A c-statistic between 0.8 and 0.9 is generally considered as excellent, and between 0.7 and 0.8 acceptable.
§Anatomical Chemical Therapeutic (ATC) Classification System, count based on the number of unique ATC codes dispensed.
¶PBS, count based on the number of unique PBS item codes dispensed.
AIC, Akaike information criterion model; IDI, integrated discrimination improvement.