Literature DB >> 29634242

A Green-Light-Responsive System for the Control of Transgene Expression in Mammalian and Plant Cells.

Claire Chatelle, Rocio Ochoa-Fernandez, Raphael Engesser, Nils Schneider, Hannes M Beyer, Alex R Jones1, Jens Timmer, Matias D Zurbriggen, Wilfried Weber.   

Abstract

The ever-increasing complexity of synthetic gene networks and applications of synthetic biology requires precise and orthogonal gene expression systems. Of particular interest are systems responsive to light as they enable the control of gene expression dynamics with unprecedented resolution in space and time. While broadly used in mammalian backgrounds, however, optogenetic approaches in plant cells are still limited due to interference of the activating light with endogenous photoreceptors. Here, we describe the development of the first synthetic light-responsive system for the targeted control of gene expression in mammalian and plant cells that responds to the green range of the light spectrum in which plant photoreceptors have minimal activity. We first engineered a system based on the light-sensitive bacterial transcription factor CarH and its cognate DNA operator sequence CarO from Thermus thermophilus to control gene expression in mammalian cells. The system was functional in various mammalian cell lines, showing high induction (up to 350-fold) along with low leakiness, as well as high reversibility. We quantitatively described the systems characteristics by the development and experimental validation of a mathematical model. Finally, we transferred the system into A. thaliana protoplasts and demonstrated gene repression in response to green light. We expect that this system will provide new opportunities in applications based on synthetic gene networks and will open up perspectives for optogenetic studies in mammalian and plant cells.

Entities:  

Keywords:  AdoB12; CarH; green light; light-responsive gene expression; optogenetics; plants

Mesh:

Substances:

Year:  2018        PMID: 29634242     DOI: 10.1021/acssynbio.7b00450

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  18 in total

Review 1.  Synthetic Switches and Regulatory Circuits in Plants.

Authors:  Jennifer Andres; Tim Blomeier; Matias D Zurbriggen
Journal:  Plant Physiol       Date:  2019-01-28       Impact factor: 8.340

2.  Plasticity in oligomerization, operator architecture, and DNA binding in the mode of action of a bacterial B12-based photoreceptor.

Authors:  Jesús Fernández-Zapata; Ricardo Pérez-Castaño; Juan Aranda; Francesco Colizzi; María Carmen Polanco; Modesto Orozco; S Padmanabhan; Montserrat Elías-Arnanz
Journal:  J Biol Chem       Date:  2018-09-27       Impact factor: 5.157

3.  Visible-to-NIR-Light Activated Release: From Small Molecules to Nanomaterials.

Authors:  Roy Weinstain; Tomáš Slanina; Dnyaneshwar Kand; Petr Klán
Journal:  Chem Rev       Date:  2020-10-30       Impact factor: 60.622

4.  Evolution-inspired design of multicolored photoswitches from a single cyanobacteriochrome scaffold.

Authors:  Keiji Fushimi; Masumi Hasegawa; Takeru Ito; Nathan C Rockwell; Gen Enomoto; Ni-Ni -Win; J Clark Lagarias; Masahiko Ikeuchi; Rei Narikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

5.  Advances in optogenetic regulation of gene expression in mammalian cells using cryptochrome 2 (CRY2).

Authors:  Carmen N Hernández-Candia; Christina L Wysoczynski; Chandra L Tucker
Journal:  Methods       Date:  2019-03-21       Impact factor: 3.608

Review 6.  Advances and prospects of rhodopsin-based optogenetics in plant research.

Authors:  Yang Zhou; Meiqi Ding; Georg Nagel; Kai R Konrad; Shiqiang Gao
Journal:  Plant Physiol       Date:  2021-10-05       Impact factor: 8.005

Review 7.  Optogenetic approaches in biotechnology and biomaterials.

Authors:  Vasily V Reshetnikov; Sviatlana V Smolskaya; Sofia G Feoktistova; Vladislav V Verkhusha
Journal:  Trends Biotechnol       Date:  2022-01-11       Impact factor: 21.942

Review 8.  The Red Edge: Bilin-Binding Photoreceptors as Optogenetic Tools and Fluorescence Reporters.

Authors:  Kun Tang; Hannes M Beyer; Matias D Zurbriggen; Wolfgang Gärtner
Journal:  Chem Rev       Date:  2021-10-20       Impact factor: 72.087

9.  Interplay between chromophore binding and domain assembly by the B12-dependent photoreceptor protein, CarH.

Authors:  Inês S Camacho; Rachelle Black; Derren J Heyes; Linus O Johannissen; Lennart A I Ramakers; Bruno Bellina; Perdita E Barran; Sam Hay; Alex R Jones
Journal:  Chem Sci       Date:  2021-05-05       Impact factor: 9.825

Review 10.  Application of combinatorial optimization strategies in synthetic biology.

Authors:  Gita Naseri; Mattheos A G Koffas
Journal:  Nat Commun       Date:  2020-05-15       Impact factor: 14.919

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