Literature DB >> 35237820

Advances and prospects of rhodopsin-based optogenetics in plant research.

Yang Zhou1, Meiqi Ding2, Georg Nagel1, Kai R Konrad2, Shiqiang Gao1.   

Abstract

Microbial rhodopsins have advanced optogenetics since the discovery of channelrhodopsins almost two decades ago. During this time an abundance of microbial rhodopsins has been discovered, engineered, and improved for studies in neuroscience and other animal research fields. Optogenetic applications in plant research, however, lagged largely behind. Starting with light-regulated gene expression, optogenetics has slowly expanded into plant research. The recently established all-trans retinal production in plants now enables the use of many microbial opsins, bringing extra opportunities to plant research. In this review, we summarize the recent advances of rhodopsin-based plant optogenetics and provide a perspective for future use, combined with fluorescent sensors to monitor physiological parameters. © American Society of Plant Biologists 2021. All rights reserved. For permissions, please email: journals.permissions@oup.com.

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Year:  2021        PMID: 35237820      PMCID: PMC8491038          DOI: 10.1093/plphys/kiab338

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.005


  203 in total

1.  Glutamate triggers long-distance, calcium-based plant defense signaling.

Authors:  Masatsugu Toyota; Dirk Spencer; Satoe Sawai-Toyota; Wang Jiaqi; Tong Zhang; Abraham J Koo; Gregg A Howe; Simon Gilroy
Journal:  Science       Date:  2018-09-14       Impact factor: 47.728

2.  A light-driven sodium ion pump in marine bacteria.

Authors:  Keiichi Inoue; Hikaru Ono; Rei Abe-Yoshizumi; Susumu Yoshizawa; Hiroyasu Ito; Kazuhiro Kogure; Hideki Kandori
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

3.  Optogenetics in Plants: Red/Far-Red Light Control of Gene Expression.

Authors:  Rocio Ochoa-Fernandez; Sophia L Samodelov; Simon M Brandl; Elke Wehinger; Konrad Müller; Wilfried Weber; Matias D Zurbriggen
Journal:  Methods Mol Biol       Date:  2016

4.  Ca2+-dependent and -independent abscisic acid activation of plasma membrane anion channels in guard cells of Nicotiana tabacum.

Authors:  Holger Marten; Kai R Konrad; Petra Dietrich; M Rob G Roelfsema; Rainer Hedrich
Journal:  Plant Physiol       Date:  2006-12-01       Impact factor: 8.340

5.  Guard cell SLAC1-type anion channels mediate flagellin-induced stomatal closure.

Authors:  Aysin Guzel Deger; Sönke Scherzer; Maris Nuhkat; Justyna Kedzierska; Hannes Kollist; Mikael Brosché; Serpil Unyayar; Marie Boudsocq; Rainer Hedrich; M Rob G Roelfsema
Journal:  New Phytol       Date:  2015-04-30       Impact factor: 10.151

6.  An engineered membrane-bound guanylyl cyclase with light-switchable activity.

Authors:  Yuehui Tian; Georg Nagel; Shiqiang Gao
Journal:  BMC Biol       Date:  2021-03-29       Impact factor: 7.431

7.  Ultrafast Two-Photon Imaging of a High-Gain Voltage Indicator in Awake Behaving Mice.

Authors:  Vincent Villette; Mariya Chavarha; Ivan K Dimov; Jonathan Bradley; Lagnajeet Pradhan; Benjamin Mathieu; Stephen W Evans; Simon Chamberland; Dongqing Shi; Renzhi Yang; Benjamin B Kim; Annick Ayon; Abdelali Jalil; François St-Pierre; Mark J Schnitzer; Guoqiang Bi; Katalin Toth; Jun Ding; Stéphane Dieudonné; Michael Z Lin
Journal:  Cell       Date:  2019-12-12       Impact factor: 41.582

8.  Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp.

Authors:  Shiqiang Gao; Jatin Nagpal; Martin W Schneider; Vera Kozjak-Pavlovic; Georg Nagel; Alexander Gottschalk
Journal:  Nat Commun       Date:  2015-09-08       Impact factor: 14.919

9.  High frequency neural spiking and auditory signaling by ultrafast red-shifted optogenetics.

Authors:  Thomas Mager; David Lopez de la Morena; Verena Senn; Johannes Schlotte; Anna D Errico; Katrin Feldbauer; Christian Wrobel; Sangyong Jung; Kai Bodensiek; Vladan Rankovic; Lorcan Browne; Antoine Huet; Josephine Jüttner; Phillip G Wood; Johannes J Letzkus; Tobias Moser; Ernst Bamberg
Journal:  Nat Commun       Date:  2018-05-01       Impact factor: 14.919

10.  A near-infrared genetically encoded calcium indicator for in vivo imaging.

Authors:  Anton A Shemetov; Mikhail V Monakhov; Qinrong Zhang; Jose Ernesto Canton-Josh; Manish Kumar; Maomao Chen; Mikhail E Matlashov; Xuan Li; Wei Yang; Liming Nie; Daria M Shcherbakova; Yevgenia Kozorovitskiy; Junjie Yao; Na Ji; Vladislav V Verkhusha
Journal:  Nat Biotechnol       Date:  2020-10-26       Impact factor: 54.908

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  1 in total

Review 1.  Encoding, transmission, decoding, and specificity of calcium signals in plants.

Authors:  Claudia Allan; Richard J Morris; Claudia-Nicole Meisrimler
Journal:  J Exp Bot       Date:  2022-06-02       Impact factor: 7.298

  1 in total

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