Literature DB >> 34271083

Complex population dynamics in a spatial microbial ecosystem with Physarum polycephalum.

Leo Epstein1, Zeth Dubois2, Jessica Smith2, Yunha Lee3, Kyle Harrington4.   

Abstract

This research addresses the interactions between the unicellular slime mold Physarum polycephalum and a red yeast in a spatial ecosystem over week-long imaging experiments. An inverse relationship between the growth rates of both species is shown, where P. polycephalum has positive growth when the red yeast has a negative growth rate and vice versa. The data also captures successional and oscillatory dynamics between both species. An advanced image analysis methodology for semantic segmentation is used to quantify population density over time, for all components of the ecosystem. We suggest that P. polycephalum is capable of exhibiting a sustainable feeding strategy by depositing a nutritive slime trail, allowing yeast to serve as a periodic food source. This opens a new direction of P. polycephalum research, where the population dynamics of spatial ecosystems can be readily quantified and complex ecological dynamics can be studied.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Microbial ecosystem; Physarum polycephalum; Population dynamics; Slime mold

Mesh:

Year:  2021        PMID: 34271083      PMCID: PMC8416962          DOI: 10.1016/j.biosystems.2021.104483

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.957


  21 in total

1.  Rapid evolution drives ecological dynamics in a predator-prey system.

Authors:  Takehito Yoshida; Laura E Jones; Stephen P Ellner; Gregor F Fussmann; Nelson G Hairston
Journal:  Nature       Date:  2003-07-17       Impact factor: 49.962

2.  Minimum-risk path finding by an adaptive amoebal network.

Authors:  Toshiyuki Nakagaki; Makoto Iima; Tetsuo Ueda; Yasumasa Nishiura; Tetsu Saigusa; Atsushi Tero; Ryo Kobayashi; Kenneth Showalter
Journal:  Phys Rev Lett       Date:  2007-08-10       Impact factor: 9.161

Review 3.  The sociobiology of biofilms.

Authors:  Carey D Nadell; Joao B Xavier; Kevin R Foster
Journal:  FEMS Microbiol Rev       Date:  2008-12-03       Impact factor: 16.408

4.  Spatial dynamics of ecological public goods.

Authors:  Joe Yuichiro Wakano; Martin A Nowak; Christoph Hauert
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-27       Impact factor: 11.205

5.  Transfer function of protoplasmic tubes of Physarum polycephalum.

Authors:  James G H Whiting; Ben P J de Lacy Costello; Andrew Adamatzky
Journal:  Biosystems       Date:  2015-01-27       Impact factor: 1.973

6.  Slime mold uses an externalized spatial "memory" to navigate in complex environments.

Authors:  Chris R Reid; Tanya Latty; Audrey Dussutour; Madeleine Beekman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-08       Impact factor: 11.205

7.  Physarum machines: encapsulating reaction-diffusion to compute spanning tree.

Authors:  Andrew Adamatzky
Journal:  Naturwissenschaften       Date:  2007-06-29

8.  Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera: A semi-quantitative, high throughput, microscopy-based assay expands existing approaches to measure SARS-CoV-2 specific antibody levels in human sera.

Authors:  Constantin Pape; Roman Remme; Adrian Wolny; Sylvia Olberg; Steffen Wolf; Lorenzo Cerrone; Mirko Cortese; Severina Klaus; Bojana Lucic; Stephanie Ullrich; Maria Anders-Össwein; Stefanie Wolf; Berati Cerikan; Christopher J Neufeldt; Markus Ganter; Paul Schnitzler; Uta Merle; Marina Lusic; Steeve Boulant; Megan Stanifer; Ralf Bartenschlager; Fred A Hamprecht; Anna Kreshuk; Christian Tischer; Hans-Georg Kräusslich; Barbara Müller; Vibor Laketa
Journal:  Bioessays       Date:  2020-12-30       Impact factor: 4.653

9.  The Caenorhabditis elegans Lifespan Machine.

Authors:  Nicholas Stroustrup; Bryne E Ulmschneider; Zachary M Nash; Isaac F López-Moyado; Javier Apfeld; Walter Fontana
Journal:  Nat Methods       Date:  2013-05-12       Impact factor: 28.547

10.  Physarum machines imitating a Roman road network: the 3D approach.

Authors:  Vasilis Evangelidis; Jeff Jones; Nikolaos Dourvas; Michail-Antisthenis Tsompanas; Georgios Ch Sirakoulis; Andrew Adamatzky
Journal:  Sci Rep       Date:  2017-08-01       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.