Literature DB >> 29606284

SMC Complexes: Universal DNA Looping Machines with Distinct Regulators.

Marjon S van Ruiten1, Benjamin D Rowland2.   

Abstract

What drives the formation of chromatin loops has been a long-standing question in chromosome biology. Recent work provides major insight into the basic principles behind loop formation. Structural maintenance of chromosomes (SMC) complexes, that are conserved from bacteria to humans, are key to this process. The SMC family includes condensin and cohesin, which structure chromosomes to enable mitosis and long-range gene regulation. We discuss novel insights into the mechanism of loop formation and the implications for how these complexes ultimately shape chromosomes. A picture is emerging in which these complexes form small loops that they then processively enlarge. It appears that SMC complexes act by family-wide basic principles, with complex-specific levels of control.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  SMC complexes; cohesin; condensin; loop extrusion; loop formation

Mesh:

Substances:

Year:  2018        PMID: 29606284     DOI: 10.1016/j.tig.2018.03.003

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  37 in total

Review 1.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

Review 2.  Condensins and cohesins - one of these things is not like the other!

Authors:  Robert V Skibbens
Journal:  J Cell Sci       Date:  2019-02-07       Impact factor: 5.285

3.  Binding of an X-Specific Condensin Correlates with a Reduction in Active Histone Modifications at Gene Regulatory Elements.

Authors:  Lena Annika Street; Ana Karina Morao; Lara Heermans Winterkorn; Chen-Yu Jiao; Sarah Elizabeth Albritton; Mohammed Sadic; Maxwell Kramer; Sevinç Ercan
Journal:  Genetics       Date:  2019-05-22       Impact factor: 4.562

4.  Physical and Functional Compartmentalization of Archaeal Chromosomes.

Authors:  Naomichi Takemata; Rachel Y Samson; Stephen D Bell
Journal:  Cell       Date:  2019-09-19       Impact factor: 41.582

Review 5.  Beads on a string-nucleosome array arrangements and folding of the chromatin fiber.

Authors:  Sandro Baldi; Philipp Korber; Peter B Becker
Journal:  Nat Struct Mol Biol       Date:  2020-02-10       Impact factor: 15.369

6.  Analyzing chromosome condensation in yeast by second-harmonic generation microscopy.

Authors:  Katreena Yamin; Michael Assa; Avi Matityahu; Itay Onn
Journal:  Curr Genet       Date:  2019-09-18       Impact factor: 3.886

7.  An RB-Condensin II Complex Mediates Long-Range Chromosome Interactions and Influences Expression at Divergently Paired Genes.

Authors:  Aren E Marshall; Charles A Ishak; Frederick A Dick
Journal:  Mol Cell Biol       Date:  2020-01-03       Impact factor: 4.272

8.  Condensin Depletion Causes Genome Decompaction Without Altering the Level of Global Gene Expression in Saccharomyces cerevisiae.

Authors:  Matthew Robert Paul; Tovah Elise Markowitz; Andreas Hochwagen; Sevinç Ercan
Journal:  Genetics       Date:  2018-07-03       Impact factor: 4.562

Review 9.  The role of transcription in shaping the spatial organization of the genome.

Authors:  Bas van Steensel; Eileen E M Furlong
Journal:  Nat Rev Mol Cell Biol       Date:  2019-06       Impact factor: 94.444

10.  Monomeric cohesin state revealed by live-cell single-molecule spectroscopy.

Authors:  Wenjie Liu; Elisheva Biton; Anjali Pathania; Avi Matityahu; Joseph Irudayaraj; Itay Onn
Journal:  EMBO Rep       Date:  2019-12-29       Impact factor: 8.807

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