Literature DB >> 31535185

Analyzing chromosome condensation in yeast by second-harmonic generation microscopy.

Katreena Yamin1, Michael Assa2, Avi Matityahu1, Itay Onn3.   

Abstract

Condensation is a fundamental property of mitotic chromosomes in eukaryotic cells. However, analyzing chromosome condensation in yeast is a challenging task while existing methods have notable weaknesses. Second-harmonic generation (SHG) microscopy is a label-free, advanced imaging technique for measuring the surface curve of isotropic molecules such as chromatin in live cells. We applied this method to detect changes in chromatin organization throughout the cell cycle in live yeast cells. We showed that SHG microscopy can be used to identify changes in chromatin organization throughout the cell cycle and in response to inactivation of the SMC complexes, cohesin and condensin. Implementation of this method will improve our ability to analyze chromatin structure in protozoa and will enhance our understanding of chromatin organization in eukaryotic cells.

Entities:  

Keywords:  Chromosome condensation; SMC complexes; Second-harmonic generation microscopy; Two-photon microscopy; Yeast chromatin

Mesh:

Year:  2019        PMID: 31535185     DOI: 10.1007/s00294-019-01034-1

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  31 in total

1.  The layered-resolved microstructure and spectroscopy of mouse oral mucosa using multiphoton microscopy.

Authors:  Shuangmu Zhuo; Jianxin Chen; Xingshan Jiang; Shusen Xie; Rong Chen; Ning Cao; Qilian Zou; Shuyuan Xiong
Journal:  Phys Med Biol       Date:  2007-08-01       Impact factor: 3.609

2.  Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and a Xenopus homolog of the Drosophila Barren protein.

Authors:  T Hirano; R Kobayashi; M Hirano
Journal:  Cell       Date:  1997-05-16       Impact factor: 41.582

Review 3.  New insights into cohesin loading.

Authors:  Ireneusz Litwin; Robert Wysocki
Journal:  Curr Genet       Date:  2017-06-19       Impact factor: 3.886

4.  Mitotic chromosome condensation requires Brn1p, the yeast homologue of Barren.

Authors:  B D Lavoie; K M Tuffo; S Oh; D Koshland; C Holm
Journal:  Mol Biol Cell       Date:  2000-04       Impact factor: 4.138

5.  Identification of Xenopus SMC protein complexes required for sister chromatid cohesion.

Authors:  A Losada; M Hirano; T Hirano
Journal:  Genes Dev       Date:  1998-07-01       Impact factor: 11.361

6.  A pathway for mitotic chromosome formation.

Authors:  Johan H Gibcus; Kumiko Samejima; Anton Goloborodko; Itaru Samejima; Natalia Naumova; Johannes Nuebler; Masato T Kanemaki; Linfeng Xie; James R Paulson; William C Earnshaw; Leonid A Mirny; Job Dekker
Journal:  Science       Date:  2018-01-18       Impact factor: 47.728

7.  Spindle-independent condensation-mediated segregation of yeast ribosomal DNA in late anaphase.

Authors:  Félix Machín; Jordi Torres-Rosell; Adam Jarmuz; Luis Aragón
Journal:  J Cell Biol       Date:  2005-01-17       Impact factor: 10.539

8.  Chromosome condensation and sister chromatid pairing in budding yeast.

Authors:  V Guacci; E Hogan; D Koshland
Journal:  J Cell Biol       Date:  1994-05       Impact factor: 10.539

9.  Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast.

Authors:  Yasutaka Kakui; Adam Rabinowitz; David J Barry; Frank Uhlmann
Journal:  Nat Genet       Date:  2017-08-21       Impact factor: 38.330

10.  Cohesinopathy mutations disrupt the subnuclear organization of chromatin.

Authors:  Scarlett Gard; William Light; Bo Xiong; Tania Bose; Adrian J McNairn; Bethany Harris; Brian Fleharty; Chris Seidel; Jason H Brickner; Jennifer L Gerton
Journal:  J Cell Biol       Date:  2009-11-09       Impact factor: 10.539

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  3 in total

1.  Monomeric cohesin state revealed by live-cell single-molecule spectroscopy.

Authors:  Wenjie Liu; Elisheva Biton; Anjali Pathania; Avi Matityahu; Joseph Irudayaraj; Itay Onn
Journal:  EMBO Rep       Date:  2019-12-29       Impact factor: 8.807

2.  Fold-change of chromatin condensation in yeast is a conserved property.

Authors:  Katreena Yamin; Swati Bijlani; Judith Berman; Awakash Soni; Joseph Shlomai; Bijoy Mukut Buragohain; Michal Werbner; Meital Gal-Tanamy; Avi Matityahu; Itay Onn
Journal:  Sci Rep       Date:  2022-10-17       Impact factor: 4.996

3.  A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae.

Authors:  Su Ming Sun; Amandine Batté; Mireille Elmer; Sophie C van der Horst; Tibor van Welsem; Gordon Bean; Trey Ideker; Fred van Leeuwen; Haico van Attikum
Journal:  J Cell Sci       Date:  2020-05-22       Impact factor: 5.285

  3 in total

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