Literature DB >> 29599245

Binding of ISRIB reveals a regulatory site in the nucleotide exchange factor eIF2B.

Alisa F Zyryanova1, Félix Weis2,3,4,5, Alexandre Faille2,3,4, Akeel Abo Alard6, Ana Crespillo-Casado2, Yusuke Sekine2, Heather P Harding2, Felicity Allen7, Leopold Parts7, Christophe Fromont6, Peter M Fischer6, Alan J Warren1,3,4,5, David Ron1.   

Abstract

The integrated stress response (ISR) is a conserved translational and transcriptional program affecting metabolism, memory, and immunity. The ISR is mediated by stress-induced phosphorylation of eukaryotic translation initiation factor 2α (eIF2α) that attenuates the guanine nucleotide exchange factor eIF2B. A chemical inhibitor of the ISR, ISRIB, reverses the attenuation of eIF2B by phosphorylated eIF2α, protecting mice from neurodegeneration and traumatic brain injury. We describe a 4.1-angstrom-resolution cryo-electron microscopy structure of human eIF2B with an ISRIB molecule bound at the interface between the β and δ regulatory subunits. Mutagenesis of residues lining this pocket altered the hierarchical cellular response to ISRIB analogs in vivo and ISRIB binding in vitro. Our findings point to a site in eIF2B that can be exploited by ISRIB to regulate translation.
Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2018        PMID: 29599245      PMCID: PMC5889100          DOI: 10.1126/science.aar5129

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  31 in total

1.  Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy.

Authors:  Peter B Rosenthal; Richard Henderson
Journal:  J Mol Biol       Date:  2003-10-31       Impact factor: 5.469

2.  Crystal structure of eukaryotic translation initiation factor 2B.

Authors:  Kazuhiro Kashiwagi; Mari Takahashi; Madoka Nishimoto; Takuya B Hiyama; Toshiaki Higo; Takashi Umehara; Kensaku Sakamoto; Takuhiro Ito; Shigeyuki Yokoyama
Journal:  Nature       Date:  2016-02-22       Impact factor: 49.962

3.  Stress responses. Mutations in a translation initiation factor identify the target of a memory-enhancing compound.

Authors:  Yusuke Sekine; Alisa Zyryanova; Ana Crespillo-Casado; Peter M Fischer; Heather P Harding; David Ron
Journal:  Science       Date:  2015-04-09       Impact factor: 47.728

4.  Structure of the nucleotide exchange factor eIF2B reveals mechanism of memory-enhancing molecule.

Authors:  Jordan C Tsai; Lakshmi E Miller-Vedam; Aditya A Anand; Priyadarshini Jaishankar; Henry C Nguyen; Adam R Renslo; Adam Frost; Peter Walter
Journal:  Science       Date:  2018-03-30       Impact factor: 47.728

5.  Inhibition of the integrated stress response reverses cognitive deficits after traumatic brain injury.

Authors:  Austin Chou; Karen Krukowski; Timothy Jopson; Ping Jun Zhu; Mauro Costa-Mattioli; Peter Walter; Susanna Rosi
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-10       Impact factor: 11.205

6.  Phosphorylation inhibits guanine nucleotide exchange on eukaryotic initiation factor 2.

Authors:  M J Clemens; V M Pain; S T Wong; E C Henshaw
Journal:  Nature       Date:  1982-03-04       Impact factor: 49.962

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  Mutations in the GCD7 subunit of yeast guanine nucleotide exchange factor eIF-2B overcome the inhibitory effects of phosphorylated eIF-2 on translation initiation.

Authors:  C R Vazquez de Aldana; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1994-05       Impact factor: 4.272

9.  Beam-induced motion correction for sub-megadalton cryo-EM particles.

Authors:  Sjors Hw Scheres
Journal:  Elife       Date:  2014-08-13       Impact factor: 8.140

10.  Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles.

Authors:  Xiao-Chen Bai; Israel S Fernandez; Greg McMullan; Sjors H W Scheres
Journal:  Elife       Date:  2013-02-19       Impact factor: 8.140

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  64 in total

1.  Adaptive Protein Translation by the Integrated Stress Response Maintains the Proliferative and Migratory Capacity of Lung Adenocarcinoma Cells.

Authors:  Sally J Adua; Wesley L Cai; Alexandra E Albert; Anna Arnal-Estapé; Gary W Cline; Zongzhi Liu; Minghui Zhao; Paul D Cao; Malaiyalam Mariappan; Don X Nguyen
Journal:  Mol Cancer Res       Date:  2019-09-24       Impact factor: 5.852

Review 2.  Cryo-EM in drug discovery: achievements, limitations and prospects.

Authors:  Jean-Paul Renaud; Ashwin Chari; Claudio Ciferri; Wen-Ti Liu; Hervé-William Rémigy; Holger Stark; Christian Wiesmann
Journal:  Nat Rev Drug Discov       Date:  2018-06-08       Impact factor: 84.694

3.  Inhibition of the integrated stress response by viral proteins that block p-eIF2-eIF2B association.

Authors:  Huib H Rabouw; Linda J Visser; Tim C Passchier; Martijn A Langereis; Fan Liu; Piero Giansanti; Arno L W van Vliet; José G Dekker; Susanne G van der Grein; Jesús G Saucedo; Aditya A Anand; Mikael E Trellet; Alexandre M J J Bonvin; Peter Walter; Albert J R Heck; Raoul J de Groot; Frank J M van Kuppeveld
Journal:  Nat Microbiol       Date:  2020-07-20       Impact factor: 17.745

Review 4.  Small molecule strategies to harness the unfolded protein response: where do we go from here?

Authors:  Julia M D Grandjean; R Luke Wiseman
Journal:  J Biol Chem       Date:  2020-09-04       Impact factor: 5.157

Review 5.  The Integrated Stress Response and Phosphorylated Eukaryotic Initiation Factor 2α in Neurodegeneration.

Authors:  Sarah Bond; Claudia Lopez-Lloreda; Patrick J Gannon; Cagla Akay-Espinoza; Kelly L Jordan-Sciutto
Journal:  J Neuropathol Exp Neurol       Date:  2020-02-01       Impact factor: 3.685

6.  The gene for the lysosomal protein LAMP3 is a direct target of the transcription factor ATF4.

Authors:  Thomas D Burton; Anthony O Fedele; Jianling Xie; Lauren Y Sandeman; Christopher G Proud
Journal:  J Biol Chem       Date:  2020-04-20       Impact factor: 5.157

7.  Small Molecule Modulation of the Integrated Stress Response Governs the Keratoconic Phenotype In Vitro.

Authors:  Uri Simcha Soiberman; Ahmed Elsayed Mahmoud Shehata; Michelle Xiaoyi Lu; Tempest Young; Yassine J Daoud; Shukti Chakravarti; Albert S Jun; James William Foster
Journal:  Invest Ophthalmol Vis Sci       Date:  2019-08-01       Impact factor: 4.799

8.  Unique integrated stress response sensors regulate cancer cell susceptibility when Hsp70 activity is compromised.

Authors:  Sara Sannino; Megan E Yates; Mark E Schurdak; Steffi Oesterreich; Adrian V Lee; Peter Wipf; Jeffrey L Brodsky
Journal:  Elife       Date:  2021-06-28       Impact factor: 8.140

9.  Repurposing ribosome-targeting antibiotics to overcome resistance to venetoclax in acute myeloid leukemia.

Authors:  David Sharon; Steven M Chan
Journal:  Mol Cell Oncol       Date:  2020-01-28

10.  eIF2B and the Integrated Stress Response: A Structural and Mechanistic View.

Authors:  Assen Marintchev; Takuhiro Ito
Journal:  Biochemistry       Date:  2020-03-26       Impact factor: 3.162

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