| Literature DB >> 29581092 |
Luca Giancardo1,2, Álvaro Sánchez-Ferro1,3,4,5,6, Teresa Arroyo-Gallego7,8,9,10, María J Ledesma-Carbayo8,9, Ian Butterworth1, Michele Matarazzo3,4,5,11, Paloma Montero-Escribano12, Verónica Puertas-Martín4, Martha L Gray7,1.
Abstract
BACKGROUND: Parkinson's disease (PD) is the second most prevalent neurodegenerative disease and one of the most common forms of movement disorder. Although there is no known cure for PD, existing therapies can provide effective symptomatic relief. However, optimal titration is crucial to avoid adverse effects. Today, decision making for PD management is challenging because it relies on subjective clinical evaluations that require a visit to the clinic. This challenge has motivated recent research initiatives to develop tools that can be used by nonspecialists to assess psychomotor impairment. Among these emerging solutions, we recently reported the neuroQWERTY index, a new digital marker able to detect motor impairment in an early PD cohort through the analysis of the key press and release timing data collected during a controlled in-clinic typing task.Entities:
Keywords: eHealth; machine learning; telemedicine
Mesh:
Year: 2018 PMID: 29581092 PMCID: PMC5891671 DOI: 10.2196/jmir.9462
Source DB: PubMed Journal: J Med Internet Res ISSN: 1438-8871 Impact factor: 5.428
Comparison of the clinical and demographic variables between the Parkinson's disease and control groups. From the total participants, 52 provided a sufficient amount of at-home typing data (a cumulative total of at least 15 min). The UPDRS-III scale ranges from 0 to 108 (a higher score indicates more severe impairment and disability). For reference, a score of 20 points is typical of patients with very mild disease severity.
| Variable | People with Parkinson’s (n=25) | Healthy controls (n=27) | |
| UPDRS-IIIa, mean (SD) | 20.48 (6.56) | 1.93 (1.84) | <.001 |
| Age in years, mean (SD) | 60.2 (12.0) | 60.81 (10.63) | .73 |
| Number of women, n (%) | 12 (48) | 14 (52) | .79 |
| Number of men, n (%) | 13 (52) | 13 (48) | .79 |
| Daily typing in minutes, mean (SD) | 24.58 (15.91) | 23.58 (14.68) | .61 |
aUPDRS-III: Unified Parkinson’s Disease Rating Scale (Part III).
Figure 1At-home typing activity. Panel A represents the amount of typing data collected from each of the 52 subjects (25 PwP, 27 CNT) included in the analysis. The red (PwP) and blue (CNT) color scales indicate daily typing activity measured as the number of valid typing windows provided by each subject during the analysis period. We defined a valid window as a sequence of at least 30 keystrokes within 90 s. Panel B illustrates the variability in the amount of typing data with an example from a single PwP subject.
Figure 2The neuroQWERTY platform. This platform was designed to allow for automatic data retrieval of typing data collected at home and remote management by a study coordinator. Operationally, an account in the neuroQWERTY platform was created for each participant in the study. The data-collection software was downloaded and installed in their users’ personal laptop to enable remote data collection. The data, linked to each user account, was encrypted and automatically sent to a remote server through their home Internet connection. The neuroQWERTY platform also implemented an administrator module to provide the study coordinators with an interface to control and visualize participants’ typing activity.
Figure 3Algorithm pipeline. The figure represents the pipeline to generate a single neuroQWERTY index (nQi) from a stream of typing data. (1) The typing signal is defined as the time series of hold times corresponding to each keystroke within a typing routine. This signal is split by nonoverlapping 90-s windows that the algorithm will evaluate as independent typing units. (2) Only windows with at least 30 keystrokes within the 90-s interval are analyzed. (3) The neuroQWERTY algorithm, previously trained on a separate in-clinic dataset, computes a single numerical score from each independent window. (4) The final nQi is computed as the average of the window-level scores.
Figure 4Example of the application of the neuroQWERTY algorithm in an in-clinic typing test.
Figure 5Example of the application of the neuroQWERTY algorithm in the at-home setting. The neuroQWERTY algorithm described in Figure 3 can be used indistinctly to evaluate controlled or natural typing data. This figure represents the at-home typing data and corresponding scores for the same subject shown in Figure 4 (note different time scales used in Figure 4 and Figure 5). Although the uncontrolled activity appears in unpredictable bursts that introduce a high degree of sparsity, our window-based approach allows to analyze the at-home data using the same method applied for the quasi-continuous in-clinic data.
Figure 6Comparison of raw typing metrics between in-clinic and at-home typing settings. The figure shows the correlation of the raw typing metrics, hold time (HT; time between pressing and releasing a key), and flight time (FT; delay between two consecutive key presses), between in-clinic and at-home settings. Each point represents the metric coordinates (in-clinic, at-home) for each of the 52 participants included in the analysis. Both HT and FT values are very similar independently of the typing scenario, as shown by the correlation coefficient values. These results suggest that the in-clinic task does not alter the way subjects type in comparison with their natural typing at-home, which supports our hypothesis that the neuroQWERTY algorithm, built in an in-clinic setting, could be applied to evaluate motor impairment using the typing data from an uncontrolled at-home setting.
Figure 7Comparison of neuroQWERTY index (nQi) between in-clinic and at-home typing settings. We evaluated the influence of the typing setting in the nQi scores by applying a similar analysis as described in Figure 6 for the raw typing metrics. Panel A shows the correlation of the nQi scores computed in-clinic and at-home. Panel B includes the results of the Bland-Altman analysis to evaluate the agreement of our method in the two typing scenarios. The black line shows the mean difference (d) and the top and bottom dashed lines show the limits of agreement (LoA, d±1.96×SDd).
Figure 8Comparison of neuroQWERTY index (nQi) performance between in-clinic and at-home typing settings. Panel A scatterplot illustrates the in-clinic and at-home nQi scores in a patient level. The two black lines represent the classification thresholds computed in-clinic (nQi=0.0473) and at-home (nQi=0.0667). These thresholds were estimated for closest-to-(0,1) cutoff points that maximize sensitivity/specificity pairs. Panel B presents the comparison of the receiver operating characteristic (ROC) curves showing the classification rate for the in-clinic and at-home nQi. The plotted curves are the average result of the bootstrapped ROC analysis and the shadowed areas represent the corresponding CIs [5th-95th]. The statistical significance of the Mann-Whitney U test is estimated to reject the null hypothesis that the two groups, PwP and CNT, come from the same population. It is noted as: P<.001(***), P<.01(**), and P<.05(*).
The neuroQWERTY index (nQi) performance comparison. The classification performance achieved at-Home is comparable with the results obtained in a controlled in-clinic. The statistical significance is computed with 2-sided Mann-Whitney U test to reject the null hypothesis that PwP and healthy control subjects come from the same population.
| Metric | nQia Score | |
| In-clinic | At-home | |
| Mean (SD) for PwPb (n=25) | 0.092 (0.058) | 0.090 (0.048) |
| Mean (SD) for healthy controls (n=27) | 0.046 (0.029) | 0.054 (0.030) |
| AUCc (5th-95th) | 0.83 (0.74-0.92) | 0.76 (0.66-0.88) |
| Significance | ||
| Sensitivity/specificity | 0.77/0.72 | 0.73/0.69 |
| DeLong test | ||
| Percentage agreement | 79% | 79% |
anQi: neuroQWERTY index.
bPwP: people with Parkinson’s.
cAUC: area under the curve.