| Literature DB >> 29573061 |
Ning Wang1,2, Xingguo Song3,4, Lisheng Liu2,3, Limin Niu1,2, Xingwu Wang3,4, Xianrang Song2,3,4, Li Xie2,3,4.
Abstract
The present study aimed to investigate the overall changes in exosomal proteomes in metastatic and non-metastatic non-small-cell lung cancers (NSCLC) and healthy human serum samples, and evaluate the potential of serum exosomal biomarkers to predict NSCLC metastasis. Tandem mass tags combined with multidimensional liquid chromatography and mass spectrometry analysis were used for screening the proteomic profiles of serum samples. Quantitative proteome, significant pathway, and functional categories of patients with metastatic and non-metastatic NSCLC and healthy donors were investigated. In total, 552 proteins of the 628 protein groups identified were quantified. Bioinformatics analysis indicated that quantifiable proteins were mainly involved in multiple biological functions, metastasis-related pathways. Moreover, lipopolysaccharide-binding proteins (LBP) in the exosomes were found to be well distinguished between patients with metastatic and patients with non-metastatic NSCLC. Area under the curve (AUC) was 0.803 with a sensitivity of 83.1% and a specificity of 67% (P < .0001). Circulating LBP were also well distinguishable between metastatic and non-metastatic NSCLC, the AUC was 0.683 with a sensitivity of 79.5% and a specificity of 47.2% (P = .005). This novel study provided a reference proteome map for metastatic NSCLC. Patients with metastatic and non-metastatic NSCLC differed in exosome-related proteins in the serum. LBP might be promising and effective candidates of metastatic NSCLC.Entities:
Keywords: exosome; lipopolysaccharide-binding protein; metastatic biomarker; non-small-cell lung cancer; proteomics
Mesh:
Substances:
Year: 2018 PMID: 29573061 PMCID: PMC5980308 DOI: 10.1111/cas.13581
Source DB: PubMed Journal: Cancer Sci ISSN: 1347-9032 Impact factor: 6.716
Figure 1Exosome characterization and quantification of total proteins. Mann‐Whitney U‐test indicated significant differences in total protein levels between the different patient groups. Data are expressed as median with interquartile range. ns, not significant; ****P < .0001. (A) Representative scanning electron microscope image showing representative data of exosomes from healthy donors 50‐150 nm in diameter (scale bar: 100 nm; high voltage (HV) = 20.00 kV). (B) Distribution of exosomes with a size of 50‐150 nm in diameter; the samples were from patients with metastatic non‐small‐cell lung cancer based on the qNano system (Izon Science Ltd, Christchurch, New Zealand). (C) Quantitative results of total proteins from exosomes of different groups; columns represent the median with interquartile range
Gene Ontology (GO) distribution of upregulated and downregulated proteins
| Cancer vs Health | Up classification | No. proteins (%) | Down classification | No. proteins (%) |
|---|---|---|---|---|
| Biological process | Cellular process | 34 (12) | Metabolic process | 7 (16) |
| Single‐organism process | 33 (11) | Biological regulation | 6 (14) | |
| Response to stimulus | 31 (11) | Single‐organism process | 5 (12) | |
| Biological regulation | 30 (10) | Response to stimulus | 5 (12) | |
| Localization | 28 (10) | Cellular process | 5 (12) | |
| Molecular function | Binding | 32 (49) | Binding | 9 (53) |
| Catalytic activity | 14 (22) | Catalytic activity | 7 (41) | |
| Structural molecule activity | 6 (9) | Molecular function regulator | 1 (6) | |
| Molecular function regulator | 4 (6) | |||
| Molecular transducer activity | 4 (6) | |||
| Cellular component | Extracellular region | 33 (19) | Organelle | 9 (31) |
| Organelle | 33 (19) | Extracellular region | 7 (24) | |
| Cell | 32 (18) | Cell | 5 (17) | |
| Membrane | 22 (13) | Membrane | 3 (10) | |
| Membrane‐enclosed lumen | 20 (11) | Macromolecular complex | 2 (7) |
Gene Ontology (GO) distribution of upregulated and downregulated proteins
| Metastasis vs Non‐metastasis | Up classification | No. proteins (%) | Down classification | No. proteins (%) |
|---|---|---|---|---|
| Biological process | Cellular process | 14 (12) | Single‐organism process | 44 (13) |
| Single‐organism process | 13 (11) | Cellular process | 40 (12) | |
| Response to stimulus | 12 (10) | Biological regulation | 40 (12) | |
| Localization | 11 (10) | Localization | 33 (10) | |
| Biological regulation | 11 (10) | Response to stimulus | 32 (9) | |
| Molecular function | Binding | 13 (52) | Binding | 42 (50) |
| Catalytic activity | 5 (20) | Catalytic activity | 18 (21) | |
| Molecular function regulator | 2 (8) | Molecular function regulator | 11 (13) | |
| Chemoattractant activity | 2 (8) | Transporter activity | 6 (7) | |
| Signal transducer activity | 1 (4) | Antioxidant activity | 3 (4) | |
| Cellular component | Extracellular region | 15 (24) | Extracellular region | 43 (23) |
| Organelle | 14 (22) | Organelle | 42 (23) | |
| Cell | 11 (17) | Cell | 41 (22) | |
| Membrane | 8 (13) | Membrane‐enclosed lumen | 23 (12) | |
| Membrane‐enclosed lumen | 7 (11) | Membrane | 20 (11) |
Figure 2Differentially expressed proteins and functional enrichment‐based clustering analysis for the quantified ubiquitylome that could distinguish between patients with metastatic and non‐metastatic non‐small‐cell lung cancer (NSCLC). (A) Biological process analysis. (B) Molecular function analysis. (C) Cellular component analysis: Ca, patients with NSCLC; H, healthy donors; M0, patients with non‐metastatic NSCLC; M1, patients with metastatic NSCLC. (D) Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis
Figure 3In vitro validation of lipopolysaccharide binding protein (LBP) in serum exosomes could serve as a metastatic biomarker. Mann‐Whitney U‐test indicated significant differences in total exosomal protein levels in different patient groups. Data are expressed as median with interquartile range. ns, not significant. **P < .01, ****P < .0001. (A) Immunoblot of LBP and HSP70 in exosomal proteins extracted from patients with metastatic and non‐metastatic non‐small‐cell lung cancer (NSCLC) and healthy donors. M0, patients with non‐metastatic NSCLC; M1, patients with distant metastatic NSCLC; H, healthy donors. (B) Quantification of exosomal LBP from patients with adenocarcinoma (AC) and squamous cell carcinoma (SCC). (C) Receiver operating characteristic (ROC) curve of patients with AC and SCC, which represents the level of exosomal LBP. (D) Quantification of exosomal LBP. Histogram showing the relationship among different groups of patients. Columns represent the median with interquartile range. (E) ROC curve of patients with NSCLC and healthy donors, which represents the level of exosomal LBP. (F) ROC curve of patients with metastatic and non‐metastatic NSCLC, which represents the level of exosomal LBP. (G) Quantification of circulating LBP in serum. (H) ROC curve of patients with NSCLC and healthy donors, which represents the level of circulating LBP. (I) ROC curve of patients with metastatic and non‐metastatic NSCLC, which represents the level of circulating LBP
Characteristics of NSCLC patients for differentially expressed exosomal LBP proteins
| Characteristics | No. cases | Median with interquartile range (ng/mL) |
|
|---|---|---|---|
| Age (year) | |||
| 33‐59 | 89 | 3.032 (0.881‐5.353) | .174 |
| 60‐88 | 94 | 1.947 (0.701‐3.869) | |
| Gender | |||
| Male | 113 | 2.386 (0.765‐5.260) | .404 |
| Female | 70 | 2.716 (0.799‐3.863) | |
| Smoking status | |||
| Smoker | 102 | 2.358 (0.826‐4.513) | .829 |
| Never smoked | 81 | 2.267 (0.522‐5.079) | |
| Histological type | |||
| Adenocarcinoma | 117 | 2.609 (1.188‐5.260) | .003 |
| Squamous cell | 38 | 0.918 (0.361‐2.924) | |
| Unknown | 28 | ||
| Pathological stage | |||
| Non‐metastasis | 94 | 0.881 (0.204‐1.994) | <.0001 |
| Metastasis | 89 | 3.231 (1.876‐5.330) | |
LBP, lipopolysaccharide binding protein; NSCLC, non‐small‐cell lung cancer.