| Literature DB >> 29568605 |
Mandisa Skhosana1,2, Shabashini Reddy2, Tarylee Reddy3, Siphelele Ntoyanto2, Elizabeth Spooner1,2, Gita Ramjee2, Noluthando Ngomane4, Anna Coutsoudis1, Photini Kiepiela2.
Abstract
INTRODUCTION: Limited information is available on the usefulness of the PIMA™ analyser in predicting antiretroviral treatment eligibility and outcome in a primary healthcare clinic setting in disadvantaged communities in KwaZulu-Natal, South Africa.Entities:
Year: 2016 PMID: 29568605 PMCID: PMC5843260 DOI: 10.4102/sajhivmed.v17i1.444
Source DB: PubMed Journal: South Afr J HIV Med ISSN: 1608-9693 Impact factor: 2.744
Characteristics of HIV-1-positive individuals undergoing CD4+ T-cell count enumeration.
| Patient characteristics | Female | Male | Total | ||||||
|---|---|---|---|---|---|---|---|---|---|
| % | Range | % | Range | % | Range | ||||
| Median age (IQR), years | 32 | - | 26–37 | 33 | - | 30–40 | 32 | - | 27–38 |
| 18–24 | 39 | 17.90 | - | 4 | 8 | - | 43 | 16.00 | - |
| 25–29 | 54 | 24.77 | - | 8 | 16 | - | 62 | 23.10 | - |
| 30–34 | 46 | 21.10 | - | 18 | 36 | - | 64 | 23.90 | - |
| 35–39 | 44 | 20.20 | - | 7 | 14 | - | 51 | 19.00 | - |
| > 40 | 35 | 16.10 | - | 13 | 26 | - | 48 | 17.90 | - |
| Median (IQR) NHLS CD4 count cells/mm3 | 292 | - | 184–453 | 254 | - | 151–387 | 286 | - | 176.5–444.5 |
| Number (%) NHLS ≤ 350 cells/mm3 | 130 | 60 | - | 34 | 68 | - | 164 | 61.19 | - |
| Number (%) NHLS ≤ 500 cells/mm3 | 176 | 81 | - | 42 | 82 | - | 218 | 81 | - |
| Median (IQR) PIMA™ CD4 count cells/mm3 | 328 | - | 204–451 | 308 | - | 179–419 | 322 | - | 204–449 |
| Number (%) PIMA™ ≤ 350 cells/mm3 | 114 | 52.30 | - | 31 | 62 | - | 145 | 54.10 | - |
| Number (%) PIMA™ ≤ 500 cells/mm3 | 173 | 79 | - | 42 | 84 | - | 215 | 80 | - |
IQR, interquartile range; NHLS, National Health Laboratory Services.
Female, n = 218;
Male, n = 50;
Total, n = 268.
Bland–Altman comparison of PIMA™ analysers versus National Health Laboratory Services versus FACS Calibur.
| Measure of agreement | PIMA analysers – NHLS | PIMA analysers – FACS Calibur | FACS Calibur – NHLS |
|---|---|---|---|
| Mean bias (± 1 s.d.) | -12.78 ± 106.63 | 7.52 ± 59.26 | -20.3 ± 97.97 |
| 95% CI bias | -33.94–8.38 | -4.24–19.28 | -39.74 – -0.86 |
| BA 95% LOA | -226.04–200.48 | -111.01–126.05 | -216.23–175.63 |
| % Similarity to predicate (%SIM Mean ± s.d.) | 101.3 ± 15 | 103.1 ± 12.7 | 98.7 ± 11.9 |
NHLS, National Health Laboratory Services; BA, Bland-Altman; LOA, limits of agreement.
n = 100.
FIGURE 1Comparison of CD4+ T-cell counts obtained by the PIMA™ analysers and the National Health Laboratory Services in whole-blood samples.
Comparison of PIMA™ analysers versus National Health Laboratory Services as categorised by CD4+ T-cell counts.
| Measure of agreement | ≤ 350 cells/mm3 | 351 cells/mm – 500 cells/mm3 | ≤ 500 cells/mm3 | > 500 cells/mm3 | All CD4+ T-cell counts |
|---|---|---|---|---|---|
| Median bias | 21 | 13 | 21 | -23 | 18 |
| BA bias (± 1 s.d.) | 32.9 ± 61.0 | 21.5 ± 90.8 | 30.1 ± 69.4 | -36.1±150.04 | 17.5 ±93.8 |
| 95% CI bias | 23.4–42.3 | -3.5–46.6 | 20.8–39.4 | -78.3–6.1 | 6.2–28.8 |
| BA 95% LOA | -89.2 –154.9 | -160.0–203.0 | -108.7–168.9 | -336.2–263.9 | -170.0–205.0 |
| % Similarity to predicate (% SIM mean ± s.d.) | 107.4 ± 15.2 | 102.7 ± 10.5 | 106.2 ± 14.35 | 97.97 ± 10 | 106 ± 15.5 |
| %SIM CV | 14.20% | 10.20% | 13.50% | 10.20% | 14.60% |
BA, Bland-Altman; LOA, limits of agreement.
n = 164;
n = 53;
n = 217;
n = 51;
n = 268.
FIGURE 2Bland–Altman plot PIMA™ point-of-care analyser – National Health Laboratory Services versus the average of PIMA™ point-of-care analyser and National Health Laboratory Services.
Performance of PIMA™ analysers compared to National Health Laboratory Services at different CD4+ T-cell thresholds.
| CD4+ T-cells/mm3 | Sensitivity (%) | Specificity (%) | Number misclassified | Number misclassified (%) | Correctly classified (%) | FP Rate | FN Rate | Negative predictive value (%) | Positive predictive value (%) |
|---|---|---|---|---|---|---|---|---|---|
| ≤ 200 | 73.50 | 98.40 | 25 | 9.3 | 90.7 | 3/25 | 22/25 | 85.20 | 95.30 |
| ≤ 350 | 83.50 | 92.30 | 35 | 13.0 | 87.0 | 8/35 | 27/35 | 78.10 | 94.50 |
| ≤ 500 | 94.00 | 78.40 | 24 | 9.0 | 91.0 | 11/24 | 13/24 | 75.50 | 94.90 |
Note: PIMA™ point-of-care [POC] testing for CD4 counts in predicting antiretroviral initiation in HIV-infected individuals in KwaZulu-Natal, Durban, South Africa.
FP, false-positive; FN, false-negative.
FIGURE 3Comparison of CD4+ T-cell counts with respect to antiretroviral therapy eligibility by PIMA™ point-of-care analyser versus National Health Laboratory Services in those HIV-1-infected patients who returned and did not return for their results.