Literature DB >> 29541497

Shared-hole graph search with adaptive constraints for 3D optic nerve head optical coherence tomography image segmentation.

Kai Yu1,2, Fei Shi1,2, Enting Gao1, Weifang Zhu1, Haoyu Chen3, Xinjian Chen1,4.   

Abstract

Optic nerve head (ONH) is a crucial region for glaucoma detection and tracking based on spectral domain optical coherence tomography (SD-OCT) images. In this region, the existence of a "hole" structure makes retinal layer segmentation and analysis very challenging. To improve retinal layer segmentation, we propose a 3D method for ONH centered SD-OCT image segmentation, which is based on a modified graph search algorithm with a shared-hole and locally adaptive constraints. With the proposed method, both the optic disc boundary and nine retinal surfaces can be accurately segmented in SD-OCT images. An overall mean unsigned border positioning error of 7.27 ± 5.40 µm was achieved for layer segmentation, and a mean Dice coefficient of 0.925 ± 0.03 was achieved for optic disc region detection.

Entities:  

Keywords:  (100.0100) Image processing; (100.2960) Image analysis; (170.4470) Ophthalmology; (170.4500) Optical coherence tomography

Year:  2018        PMID: 29541497      PMCID: PMC5846542          DOI: 10.1364/BOE.9.000962

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  38 in total

1.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

2.  Automated choroid segmentation in three-dimensional 1-μm wide-view OCT images with gradient and regional costs.

Authors:  Fei Shi; Bei Tian; Weifang Zhu; Dehui Xiang; Lei Zhou; Haobo Xu; Xinjian Chen
Journal:  J Biomed Opt       Date:  2016-12-01       Impact factor: 3.170

3.  Graph-based multi-surface segmentation of OCT data using trained hard and soft constraints.

Authors:  Pascal A Dufour; Lala Ceklic; Hannan Abdillahi; Simon Schröder; Sandro De Dzanet; Ute Wolf-Schnurrbusch; Jens Kowal
Journal:  IEEE Trans Med Imaging       Date:  2012-10-18       Impact factor: 10.048

4.  Automated 3D segmentation of multiple surfaces with a shared hole: segmentation of the neural canal opening in SD-OCT volumes.

Authors:  Bhavna J Antony; Mohammed S Miri; Michael D Abràmoff; Young H Kwon; Mona K Garvin
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

5.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

6.  Segmentation Based Sparse Reconstruction of Optical Coherence Tomography Images.

Authors:  Leyuan Fang; Shutao Li; David Cunefare; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2016-09-20       Impact factor: 10.048

7.  The number of people with glaucoma worldwide in 2010 and 2020.

Authors:  H A Quigley; A T Broman
Journal:  Br J Ophthalmol       Date:  2006-03       Impact factor: 4.638

8.  Three-dimensional histomorphometry of the normal and early glaucomatous monkey optic nerve head: neural canal and subarachnoid space architecture.

Authors:  J Crawford Downs; Hongli Yang; Christopher Girkin; Lisandro Sakata; Anthony Bellezza; Hilary Thompson; Claude F Burgoyne
Journal:  Invest Ophthalmol Vis Sci       Date:  2007-07       Impact factor: 4.799

9.  From clinical examination of the optic disc to clinical assessment of the optic nerve head: a paradigm change.

Authors:  Balwantray C Chauhan; Claude F Burgoyne
Journal:  Am J Ophthalmol       Date:  2013-06-12       Impact factor: 5.258

10.  Bias in random forest variable importance measures: illustrations, sources and a solution.

Authors:  Carolin Strobl; Anne-Laure Boulesteix; Achim Zeileis; Torsten Hothorn
Journal:  BMC Bioinformatics       Date:  2007-01-25       Impact factor: 3.169

View more
  1 in total

1.  Automated segmentation of peripapillary retinal boundaries in OCT combining a convolutional neural network and a multi-weights graph search.

Authors:  Pengxiao Zang; Jie Wang; Tristan T Hormel; Liang Liu; David Huang; Yali Jia
Journal:  Biomed Opt Express       Date:  2019-08-01       Impact factor: 3.732

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.