Literature DB >> 29540343

Genome-Wide DNA Methylation in Prediagnostic Blood and Bladder Cancer Risk in the Women's Health Initiative.

Kristina M Jordahl1, Timothy W Randolph2, Xiaoling Song3, Cassandra L Sather4, Lesley F Tinker3, Amanda I Phipps1,5, Karl T Kelsey6, Emily White1,3, Parveen Bhatti7,5.   

Abstract

Background: Differential DNA methylation as measured in blood is a promising marker of bladder cancer susceptibility. However, previous studies have exclusively used postdiagnostic blood samples, meaning that observed associations may be markers of disease rather than susceptibility.
Methods: Genome-wide methylation was measured in prediagnostic blood samples, using the Illumina Infinium HumanMethylation450 Bead Array, among 440 bladder cancer cases with the transitional cell carcinoma (TCC) subtype and 440 matched cancer-free controls from the Women's Health Initiative cohort. After normalization and probe filtering, we used conditional logistic regression models to test for associations between methylation measurements at 361,184 CpG sites and bladder cancer risk.
Results: Increased methylation at cg22748573, located in a CpG island within the 5'-UTR/first exon of the CITED4 gene, was associated with an 82% decreased risk of bladder cancer after adjusting for race/ethnicity, smoking status, pack-years of smoking, and leukocyte cell profile and accounting for multiple testing (OR = 0.18, q-value = 0.05). The result was robust to sensitivity analyses accounting for time between enrollment and diagnosis, race, tumor subtype, and secondhand smoke exposure.Conclusions: Although results need to be confirmed in additional prospective studies, differential methylation in CITED4, as measured in blood, is a promising marker of bladder cancer susceptibility.Impact: Identification of biomarkers of bladder cancer susceptibility in easily accessible tissues may allow targeting of screening efforts so as to improve bladder cancer prognosis. This is particularly important among women, who tend to have poorer bladder cancer outcomes than men. Cancer Epidemiol Biomarkers Prev; 27(6); 689-95. ©2018 AACR. ©2018 American Association for Cancer Research.

Entities:  

Mesh:

Year:  2018        PMID: 29540343      PMCID: PMC5984694          DOI: 10.1158/1055-9965.EPI-17-0951

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  42 in total

Review 1.  DNA methylation and human disease.

Authors:  Keith D Robertson
Journal:  Nat Rev Genet       Date:  2005-08       Impact factor: 53.242

2.  Gene body-specific methylation on the active X chromosome.

Authors:  Asaf Hellman; Andrew Chess
Journal:  Science       Date:  2007-02-23       Impact factor: 47.728

Review 3.  Epigenome-wide association studies for common human diseases.

Authors:  Vardhman K Rakyan; Thomas A Down; David J Balding; Stephan Beck
Journal:  Nat Rev Genet       Date:  2011-07-12       Impact factor: 53.242

4.  Tobacco smoking-associated genome-wide DNA methylation changes in the EPIC study.

Authors:  Srikant Ambatipudi; Cyrille Cuenin; Hector Hernandez-Vargas; Akram Ghantous; Florence Le Calvez-Kelm; Rudolf Kaaks; Myrto Barrdahl; Heiner Boeing; Krasimira Aleksandrova; Antonia Trichopoulou; Pagona Lagiou; Androniki Naska; Domenico Palli; Vittorio Krogh; Silvia Polidoro; Rosario Tumino; Salvatore Panico; Bas Bueno-de-Mesquita; Petra Hm Peeters; José Ramón Quirós; Carmen Navarro; Eva Ardanaz; Miren Dorronsoro; Tim Key; Paolo Vineis; Neil Murphy; Elio Riboli; Isabelle Romieu; Zdenko Herceg
Journal:  Epigenomics       Date:  2016-02-11       Impact factor: 4.778

Review 5.  Molecular biology of bladder cancer: new insights into pathogenesis and clinical diversity.

Authors:  Margaret A Knowles; Carolyn D Hurst
Journal:  Nat Rev Cancer       Date:  2015-01       Impact factor: 60.716

6.  Dynamic changes in the human methylome during differentiation.

Authors:  Louise Laurent; Eleanor Wong; Guoliang Li; Tien Huynh; Aristotelis Tsirigos; Chin Thing Ong; Hwee Meng Low; Ken Wing Kin Sung; Isidore Rigoutsos; Jeanne Loring; Chia-Lin Wei
Journal:  Genome Res       Date:  2010-02-04       Impact factor: 9.043

Review 7.  Gender and Bladder Cancer: A Collaborative Review of Etiology, Biology, and Outcomes.

Authors:  Jakub Dobruch; Siamak Daneshmand; Margit Fisch; Yair Lotan; Aidan P Noon; Matthew J Resnick; Shahrokh F Shariat; Alexandre R Zlotta; Stephen A Boorjian
Journal:  Eur Urol       Date:  2015-09-04       Impact factor: 20.096

8.  Wanderer, an interactive viewer to explore DNA methylation and gene expression data in human cancer.

Authors:  Anna Díez-Villanueva; Izaskun Mallona; Miguel A Peinado
Journal:  Epigenetics Chromatin       Date:  2015-06-23       Impact factor: 4.954

9.  Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.

Authors:  Madeleine P Ball; Jin Billy Li; Yuan Gao; Je-Hyuk Lee; Emily M LeProust; In-Hyun Park; Bin Xie; George Q Daley; George M Church
Journal:  Nat Biotechnol       Date:  2009-03-29       Impact factor: 54.908

10.  DNA methylation profiling of human chromosomes 6, 20 and 22.

Authors:  Florian Eckhardt; Joern Lewin; Rene Cortese; Vardhman K Rakyan; John Attwood; Matthias Burger; John Burton; Tony V Cox; Rob Davies; Thomas A Down; Carolina Haefliger; Roger Horton; Kevin Howe; David K Jackson; Jan Kunde; Christoph Koenig; Jennifer Liddle; David Niblett; Thomas Otto; Roger Pettett; Stefanie Seemann; Christian Thompson; Tony West; Jane Rogers; Alex Olek; Kurt Berlin; Stephan Beck
Journal:  Nat Genet       Date:  2006-10-29       Impact factor: 38.330

View more
  4 in total

1.  Differential DNA methylation in blood as a mediator of the association between cigarette smoking and bladder cancer risk among postmenopausal women.

Authors:  Kristina M Jordahl; Amanda I Phipps; Timothy W Randolph; Hilary A Tindle; Simin Liu; Lesley F Tinker; Karl T Kelsey; Emily White; Parveen Bhatti
Journal:  Epigenetics       Date:  2019-06-23       Impact factor: 4.528

2.  Gaseous air pollutants and DNA methylation in a methylome-wide association study of an ethnically and environmentally diverse population of U.S. adults.

Authors:  Katelyn M Holliday; Rahul Gondalia; Antoine Baldassari; Anne E Justice; James D Stewart; Duanping Liao; Jeff D Yanosky; Kristina M Jordahl; Parveen Bhatti; Themistocles L Assimes; James S Pankow; Weihua Guan; Myriam Fornage; Jan Bressler; Kari E North; Karen N Conneely; Yun Li; Lifang Hou; Pantel S Vokonas; Cavin K Ward-Caviness; Rory Wilson; Kathrin Wolf; Melanie Waldenberger; Josef Cyrys; Annette Peters; H Marike Boezen; Judith M Vonk; Sergi Sayols-Baixeras; Mikyeong Lee; Andrea A Baccarelli; Eric A Whitsel
Journal:  Environ Res       Date:  2022-04-30       Impact factor: 8.431

3.  Methylenetetrahydrofolate Dehydrogenase 1 Silencing Expedites the Apoptosis of Non-Small Cell Lung Cancer Cells via Modulating DNA Methylation.

Authors:  Ke Ding; Jianyang Jiang; Liang Chen; Xiaohua Xu
Journal:  Med Sci Monit       Date:  2018-10-21

4.  Mediation by differential DNA methylation of known associations between single nucleotide polymorphisms and bladder cancer risk.

Authors:  Kristina M Jordahl; Amanda I Phipps; Timothy W Randolph; Lesley F Tinker; Rami Nassir; Lifang Hou; Garnet L Anderson; Karl T Kelsey; Emily White; Parveen Bhatti
Journal:  BMC Med Genet       Date:  2020-11-19       Impact factor: 2.103

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.