Literature DB >> 35500859

Gaseous air pollutants and DNA methylation in a methylome-wide association study of an ethnically and environmentally diverse population of U.S. adults.

Katelyn M Holliday1, Rahul Gondalia2, Antoine Baldassari2, Anne E Justice3, James D Stewart2, Duanping Liao4, Jeff D Yanosky4, Kristina M Jordahl5, Parveen Bhatti6, Themistocles L Assimes7, James S Pankow8, Weihua Guan9, Myriam Fornage10, Jan Bressler11, Kari E North2, Karen N Conneely12, Yun Li13, Lifang Hou14, Pantel S Vokonas15, Cavin K Ward-Caviness16, Rory Wilson17, Kathrin Wolf18, Melanie Waldenberger17, Josef Cyrys18, Annette Peters19, H Marike Boezen20, Judith M Vonk20, Sergi Sayols-Baixeras21, Mikyeong Lee22, Andrea A Baccarelli23, Eric A Whitsel24.   

Abstract

Epigenetic mechanisms may underlie air pollution-health outcome associations. We estimated gaseous air pollutant-DNA methylation (DNAm) associations using twelve subpopulations within Women's Health Initiative (WHI) and Atherosclerosis Risk in Communities (ARIC) cohorts (n = 8397; mean age 61.3 years; 83% female; 46% African-American, 46% European-American, 8% Hispanic/Latino). We used geocoded participant address-specific mean ambient carbon monoxide (CO), nitrogen oxides (NO2; NOx), ozone (O3), and sulfur dioxide (SO2) concentrations estimated over the 2-, 7-, 28-, and 365-day periods before collection of blood samples used to generate Illumina 450 k array leukocyte DNAm measurements. We estimated methylome-wide, subpopulation- and race/ethnicity-stratified pollutant-DNAm associations in multi-level, linear mixed-effects models adjusted for sociodemographic, behavioral, meteorological, and technical covariates. We combined stratum-specific estimates in inverse variance-weighted meta-analyses and characterized significant associations (false discovery rate; FDR<0.05) at Cytosine-phosphate-Guanine (CpG) sites without among-strata heterogeneity (PCochran's Q > 0.05). We attempted replication in the Cooperative Health Research in Region of Augsburg (KORA) study and Normative Aging Study (NAS). We observed a -0.3 (95% CI: -0.4, -0.2) unit decrease in percent DNAm per interquartile range (IQR, 7.3 ppb) increase in 28-day mean NO2 concentration at cg01885635 (chromosome 3; regulatory region 290 bp upstream from ZNF621; FDR = 0.03). At intragenic sites cg21849932 (chromosome 20; LIME1; intron 3) and cg05353869 (chromosome 11; KLHL35; exon 2), we observed a -0.3 (95% CI: -0.4, -0.2) unit decrease (FDR = 0.04) and a 1.2 (95% CI: 0.7, 1.7) unit increase (FDR = 0.04), respectively, in percent DNAm per IQR (17.6 ppb) increase in 7-day mean ozone concentration. Results were not fully replicated in KORA and NAS. We identified three CpG sites potentially susceptible to gaseous air pollution-induced DNAm changes near genes relevant for cardiovascular and lung disease. Further harmonized investigations with a range of gaseous pollutants and averaging durations are needed to determine the effect of gaseous air pollutants on DNA methylation and ultimately gene expression.
Copyright © 2022 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Air pollution; DNA methylation; Epigenetics; Epigenome-wide association study; Gaseous pollutants

Mesh:

Substances:

Year:  2022        PMID: 35500859      PMCID: PMC9354583          DOI: 10.1016/j.envres.2022.113360

Source DB:  PubMed          Journal:  Environ Res        ISSN: 0013-9351            Impact factor:   8.431


  53 in total

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Authors:  Václav Horejsí; Weiguo Zhang; Burkhart Schraven
Journal:  Nat Rev Immunol       Date:  2004-08       Impact factor: 53.106

Review 2.  KORA--a research platform for population based health research.

Authors:  R Holle; M Happich; H Löwel; H E Wichmann
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Review 3.  Proteasome-independent functions of ubiquitin in endocytosis and signaling.

Authors:  Debdyuti Mukhopadhyay; Howard Riezman
Journal:  Science       Date:  2007-01-12       Impact factor: 47.728

Review 4.  Air pollution and risk of type 2 diabetes mellitus: a systematic review and meta-analysis.

Authors:  Eric V Balti; Justin B Echouffo-Tcheugui; Yandiswa Y Yako; Andre P Kengne
Journal:  Diabetes Res Clin Pract       Date:  2014-09-10       Impact factor: 5.602

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Authors:  Barry A Franklin; Robert Brook; C Arden Pope
Journal:  Curr Probl Cardiol       Date:  2015-01-03       Impact factor: 5.200

6.  The Atherosclerosis Risk in Communities (ARIC) Study: design and objectives. The ARIC investigators.

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Journal:  Am J Epidemiol       Date:  1989-04       Impact factor: 4.897

Review 7.  CPT1A-mediated Fat Oxidation, Mechanisms, and Therapeutic Potential.

Authors:  Isabel R Schlaepfer; Molishree Joshi
Journal:  Endocrinology       Date:  2020-02-01       Impact factor: 4.736

8.  Long-term exposure to air pollution is associated with biological aging.

Authors:  Cavin K Ward-Caviness; Jamaji C Nwanaji-Enwerem; Kathrin Wolf; Simone Wahl; Elena Colicino; Letizia Trevisi; Itai Kloog; Allan C Just; Pantel Vokonas; Josef Cyrys; Christian Gieger; Joel Schwartz; Andrea A Baccarelli; Alexandra Schneider; Annette Peters
Journal:  Oncotarget       Date:  2016-11-15

9.  Effects of particulate matter on genomic DNA methylation content and iNOS promoter methylation.

Authors:  Letizia Tarantini; Matteo Bonzini; Pietro Apostoli; Valeria Pegoraro; Valentina Bollati; Barbara Marinelli; Laura Cantone; Giovanna Rizzo; Lifang Hou; Joel Schwartz; Pier Alberto Bertazzi; Andrea Baccarelli
Journal:  Environ Health Perspect       Date:  2008-09-26       Impact factor: 9.031

10.  LIME, a novel transmembrane adaptor protein, associates with p56lck and mediates T cell activation.

Authors:  Eun Mi Hur; Myoungsun Son; Ok-Hee Lee; Young Bong Choi; Changwon Park; Hyunsook Lee; Yungdae Yun
Journal:  J Exp Med       Date:  2003-11-10       Impact factor: 14.307

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