Literature DB >> 26864933

Tobacco smoking-associated genome-wide DNA methylation changes in the EPIC study.

Srikant Ambatipudi1, Cyrille Cuenin1, Hector Hernandez-Vargas1, Akram Ghantous1, Florence Le Calvez-Kelm1, Rudolf Kaaks2, Myrto Barrdahl2, Heiner Boeing3, Krasimira Aleksandrova3, Antonia Trichopoulou4,5, Pagona Lagiou4,5, Androniki Naska4,5, Domenico Palli6, Vittorio Krogh7, Silvia Polidoro8, Rosario Tumino9, Salvatore Panico10, Bas Bueno-de-Mesquita11,12,13,14, Petra Hm Peeters15,16, José Ramón Quirós17, Carmen Navarro18,19,20, Eva Ardanaz19,21,22, Miren Dorronsoro23, Tim Key24, Paolo Vineis25, Neil Murphy25, Elio Riboli25, Isabelle Romieu1, Zdenko Herceg1.   

Abstract

AIM: Epigenetic changes may occur in response to environmental stressors, and an altered epigenome pattern may represent a stable signature of environmental exposure. MATERIALS &
METHODS: Here, we examined the potential of DNA methylation changes in 910 prediagnostic peripheral blood samples as a marker of exposure to tobacco smoke in a large multinational cohort.
RESULTS: We identified 748 CpG sites that were differentially methylated between smokers and nonsmokers, among which we identified novel regionally clustered CpGs associated with active smoking. Importantly, we found a marked reversibility of methylation changes after smoking cessation, although specific genes remained differentially methylated up to 22 years after cessation.
CONCLUSION: Our study has comprehensively cataloged the smoking-associated DNA methylation alterations and showed that these alterations are reversible after smoking cessation.

Entities:  

Keywords:  DNA methylome; epigenetic signature; prospective cohort; tobacco smoking

Mesh:

Year:  2016        PMID: 26864933     DOI: 10.2217/epi-2016-0001

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  89 in total

1.  Differential DNA methylation in blood as a mediator of the association between cigarette smoking and bladder cancer risk among postmenopausal women.

Authors:  Kristina M Jordahl; Amanda I Phipps; Timothy W Randolph; Hilary A Tindle; Simin Liu; Lesley F Tinker; Karl T Kelsey; Emily White; Parveen Bhatti
Journal:  Epigenetics       Date:  2019-06-23       Impact factor: 4.528

2.  Cigarette smoking significantly alters sperm DNA methylation patterns.

Authors:  T G Jenkins; E R James; D F Alonso; J R Hoidal; P J Murphy; J M Hotaling; B R Cairns; D T Carrell; K I Aston
Journal:  Andrology       Date:  2017-09-26       Impact factor: 3.842

3.  Longitudinal analysis of epigenome-wide DNA methylation reveals novel smoking-related loci in African Americans.

Authors:  Jiaxuan Liu; Wei Zhao; Farah Ammous; Stephen T Turner; Thomas H Mosley; Xiang Zhou; Jennifer A Smith
Journal:  Epigenetics       Date:  2019-03-14       Impact factor: 4.528

4.  Breast tumor DNA methylation patterns associated with smoking in the Carolina Breast Cancer Study.

Authors:  Kathleen Conway; Sharon N Edmiston; Eloise Parrish; Christopher Bryant; Chiu-Kit Tse; Theresa Swift-Scanlan; Lauren E McCullough; Pei Fen Kuan
Journal:  Breast Cancer Res Treat       Date:  2017-03-08       Impact factor: 4.872

5.  Estimating and testing high-dimensional mediation effects in epigenetic studies.

Authors:  Haixiang Zhang; Yinan Zheng; Zhou Zhang; Tao Gao; Brian Joyce; Grace Yoon; Wei Zhang; Joel Schwartz; Allan Just; Elena Colicino; Pantel Vokonas; Lihui Zhao; Jinchi Lv; Andrea Baccarelli; Lifang Hou; Lei Liu
Journal:  Bioinformatics       Date:  2016-06-29       Impact factor: 6.937

Review 6.  Defining, distinguishing and detecting the contribution of heterogeneous methylation to cancer heterogeneity.

Authors:  Thomas R Pisanic; Pornpat Athamanolap; Tza-Huei Wang
Journal:  Semin Cell Dev Biol       Date:  2016-08-28       Impact factor: 7.727

7.  Paternal nicotine exposure in rats produces long-lasting neurobehavioral effects in the offspring.

Authors:  Andrew B Hawkey; Hannah White; Erica Pippen; Eva Greengrove; Amir H Rezvani; Susan K Murphy; Edward D Levin
Journal:  Neurotoxicol Teratol       Date:  2019-05-16       Impact factor: 3.763

8.  Genome-Wide DNA Methylation in Prediagnostic Blood and Bladder Cancer Risk in the Women's Health Initiative.

Authors:  Kristina M Jordahl; Timothy W Randolph; Xiaoling Song; Cassandra L Sather; Lesley F Tinker; Amanda I Phipps; Karl T Kelsey; Emily White; Parveen Bhatti
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2018-03-14       Impact factor: 4.254

9.  Using DNA methylation to validate an electronic medical record phenotype for smoking.

Authors:  Kathleen A McGinnis; Amy C Justice; Janet P Tate; Henry R Kranzler; Hilary A Tindle; William C Becker; John Concato; Joel Gelernter; Boyang Li; Xinyu Zhang; Hongyu Zhao; Kristina Crothers; Ke Xu
Journal:  Addict Biol       Date:  2018-10-04       Impact factor: 4.280

10.  Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers.

Authors:  Theresa Ryan Stueve; Wen-Qing Li; Jianxin Shi; Crystal N Marconett; Tongwu Zhang; Chenchen Yang; Daniel Mullen; Chunli Yan; William Wheeler; Xing Hua; Beiyun Zhou; Zea Borok; Neil E Caporaso; Angela C Pesatori; Jubao Duan; Ite A Laird-Offringa; Maria Teresa Landi
Journal:  Hum Mol Genet       Date:  2017-08-01       Impact factor: 6.150

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