| Literature DB >> 29540240 |
Guo-Jin Ou1,2, Pin-Can Su3, Hao Yu1,2, Xin Ji1,2, Fan Liu1,2, Sheng-Lan Wang4, Yu-Jie Kong1,2, Ling Li1,2, Jue Wang5,6, Zhong Liu7,8, Willy Albert Flegel9.
Abstract
BACKGROUND: Human neutrophil antigen 3 (HNA-3) is encoded by the SLC44A2 gene. Antibodies against HNAs can cause severe, often fatal, transfusion reactions, known as transfusion-related acute lung injury, and neonatal neutropenia. We explored the 2 common HNA-3 variants in 9 ethnic populations residing in Sichuan and Yunnan provinces of China as compared to the Han population.Entities:
Keywords: Gene polymorphism; HNA-3 antigens; PCR-SBT genotyping; TRALI
Mesh:
Substances:
Year: 2018 PMID: 29540240 PMCID: PMC5853077 DOI: 10.1186/s12967-018-1447-1
Source DB: PubMed Journal: J Transl Med ISSN: 1479-5876 Impact factor: 5.531
Fig. 1The locations of the populations in Southwest China. Blood samples came from 9 ethnicities of the minority population groups in Yunnan province. Additional blood samples from the Yi ethnicity in Sichuan and the majority population group of Han ethnicity in Yunnan and Sichuan were collected for comparison
SLC44A2 allele distribution and HNA-3 antigens predicted by genotype
| Blood donors | Genotypes | Hardy–Weinberg | Chance of being exposed to an alloimmunization risk against HNA-3a | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Population group | Ethnicity | Location | Province | n | HNA-3a/a | HNA-3a/b | HNA-3b/b | HNA-3a | HNA-3b | χ2 |
| |
| Minority | Yi | Honghe | Yunnan | 120 | 61 (51%) | 53 (44%) | 6 (5%)a | 0.73 | 0.27b,c | 1.67 | 0.2 | 0.068 |
| Chuxiong | Yunnan | 153 | 82 (54%) | 58 (38%) | 13 (8%)a | 0.73 | 0.27b,c | 0.36 | 0.55 | 0.068 | ||
| Luquan | Yunnan | 122 | 55 (45%) | 56 (46%) | 11 (9%)a | 0.68 | 0.32d | 0.37 | 0.54 | 0.092 | ||
| Shilin | Yunnan | 83 | 39 (47%) | 33 (40%) | 11 (13%) | 0.67 | 0.33d | 0.88 | 0.35 | 0.097 | ||
| Xichang | Sichuan | 144 | 57 (40%) | 59 (41%) | 28 (19%) | 0.60 | 0.40 | 3.06 | 0.08 | 0.134 | ||
| Zhuang | Wenshan | Yunnan | 196 | 115 (59%) | 69 (35%) | 12 (6%)a | 0.76 | 0.24b,c | 0.15 | 0.70 | 0.054 | |
| Derung | Nujiang | Yunnan | 184 | 107 (58%) | 62 (34%) | 15 (8%)a | 0.75 | 0.25b,c | 1.89 | 0.17 | 0.059 | |
| Hani | Honghe | Yunnan | 190 | 119 (63%) | 59 (31%) | 12 (6%)a | 0.78 | 0.22 | 1.56 | 0.21 | 0.046 | |
| Lisu | Lijiang | Yunnan | 254 | 146 (57%) | 87 (34%) | 21 (8%)a | 0.75 | 0.25b,c | 2.34 | 0.13 | 0.059 | |
| Bai | Dali | Yunnan | 190 | 95 (50%) | 79 (42%) | 16 (8%)a | 0.71 | 0.29 | 0.01 | 0.94 | 0.077 | |
| Miao | Wenshan | Yunnan | 209 | 101 (48%) | 90 (43%) | 18 (9%)a | 0.70 | 0.30d | 0.11 | 0.74 | 0.082 | |
| Dai | Xishuangbanna | Yunnan | 126 | 62 (49%) | 51 (40%) | 13 (10%) | 0.69 | 0.31 | 0.27 | 0.60 | 0.087 | |
| Naxi | Lijiang | Yunnan | 187 | 85 (45%) | 86 (46%) | 16 (9%)a | 0.68 | 0.32 | 0.78 | 0.38 | 0.092 | |
| Majority | Han | Yunnan | Yunnan | 192 | 67 (35%) | 102 (53%) | 23 (12%) | 0.61 | 0.39d | 2.83 | 0.09 | 0.129 |
| Han | Sichuan | Sichuan | 232 | 94 (41%) | 113 (49%) | 25 (11%) | 0.65 | 0.35 | 1.09 | 0.30 | 0.107 | |
Differences were significant when P < 0.05
aThe genotype frequency significantly differs compared to Sichuan Yi (Chi square test)
bThe allele frequency significantly differs compared to Sichuan Yi (Chi square test)
cThe allele frequency significantly differs compared to Sichuan Han (Chi square test)
dThe allele frequency significantly differs compared to Yunnan Zhuang (Chi square test)