Literature DB >> 29517052

Molecular genetic testing for hereditary ataxia: What every neurologist should know.

Stephanie E Wallace1, Thomas D Bird1.   

Abstract

PURPOSE OF REVIEW: Because of extensive clinical overlap among many forms of hereditary ataxia, molecular genetic testing is often required to establish a diagnosis. Interrogation of multiple genes has become a popular diagnostic approach as the cost of sequence analysis has decreased and the number of genes associated with overlapping phenotypes has increased. We describe the benefits and limitations of molecular genetic tests commonly used to determine the etiology of hereditary ataxia. RECENT
FINDINGS: There are more than 300 hereditary disorders associated with ataxia. The most common causes of hereditary ataxia are expansion of nucleotide repeats within 7 genes: ATXN1, ATXN2, ATXN3, ATXN7, ATXN8, CACNA1A (spinocerebellar ataxia type 6), and FXN (Friedreich ataxia). Recent reports describing the use of clinical exome sequencing to identify causes of hereditary ataxia may lead neurologists to start their clinical investigation with a less sensitive molecular test providing a misleading "negative" result.
SUMMARY: The majority of individuals with hereditary ataxias have nucleotide repeat expansions, pathogenic variants that are not detectable with clinical exome sequencing. Multigene panels that include specific assays to determine nucleotide repeat lengths should be considered first in individuals with hereditary ataxia.

Entities:  

Year:  2018        PMID: 29517052      PMCID: PMC5839675          DOI: 10.1212/CPJ.0000000000000421

Source DB:  PubMed          Journal:  Neurol Clin Pract        ISSN: 2163-0402


  8 in total

1.  Clinical exome sequencing for cerebellar ataxia and spastic paraplegia uncovers novel gene-disease associations and unanticipated rare disorders.

Authors:  Bart P van de Warrenburg; Meyke I Schouten; Susanne T de Bot; Sascha Vermeer; Rowdy Meijer; Maartje Pennings; Christian Gilissen; Michèl Aap Willemsen; Hans Scheffer; Erik-Jan Kamsteeg
Journal:  Eur J Hum Genet       Date:  2017-02       Impact factor: 4.246

2.  A panel study on patients with dominant cerebellar ataxia highlights the frequency of channelopathies.

Authors:  Marie Coutelier; Giulia Coarelli; Marie-Lorraine Monin; Juliette Konop; Claire-Sophie Davoine; Christelle Tesson; Rémi Valter; Mathieu Anheim; Anthony Behin; Giovanni Castelnovo; Perrine Charles; Albert David; Claire Ewenczyk; Mélanie Fradin; Cyril Goizet; Didier Hannequin; Pierre Labauge; Florence Riant; Pierre Sarda; Yves Sznajer; François Tison; Urielle Ullmann; Lionel Van Maldergem; Fanny Mochel; Alexis Brice; Giovanni Stevanin; Alexandra Durr
Journal:  Brain       Date:  2017-06-01       Impact factor: 13.501

3.  Hypomorphic mutations in POLR3A are a frequent cause of sporadic and recessive spastic ataxia.

Authors:  Martina Minnerop; Delia Kurzwelly; Holger Wagner; Anne S Soehn; Jennifer Reichbauer; Feifei Tao; Tim W Rattay; Michael Peitz; Kristina Rehbach; Alejandro Giorgetti; Angela Pyle; Holger Thiele; Janine Altmüller; Dagmar Timmann; Ilker Karaca; Martina Lennarz; Jonathan Baets; Holger Hengel; Matthis Synofzik; Burcu Atasu; Shawna Feely; Marina Kennerson; Claudia Stendel; Tobias Lindig; Michael A Gonzalez; Rüdiger Stirnberg; Marc Sturm; Sandra Roeske; Johanna Jung; Peter Bauer; Ebba Lohmann; Stefan Herms; Stefanie Heilmann-Heimbach; Garth Nicholson; Muhammad Mahanjah; Rajech Sharkia; Paolo Carloni; Oliver Brüstle; Thomas Klopstock; Katherine D Mathews; Michael E Shy; Peter de Jonghe; Patrick F Chinnery; Rita Horvath; Jürgen Kohlhase; Ina Schmitt; Michael Wolf; Susanne Greschus; Katrin Amunts; Wolfgang Maier; Ludger Schöls; Peter Nürnberg; Stephan Zuchner; Thomas Klockgether; Alfredo Ramirez; Rebecca Schüle
Journal:  Brain       Date:  2017-06-01       Impact factor: 13.501

4.  Utility of Whole Exome Sequencing for Genetic Diagnosis of Previously Undiagnosed Pediatric Neurology Patients.

Authors:  Maya Kuperberg; Dorit Lev; Lubov Blumkin; Ayelet Zerem; Mira Ginsberg; Ilan Linder; Nirit Carmi; Sarah Kivity; Tally Lerman-Sagie; Esther Leshinsky-Silver
Journal:  J Child Neurol       Date:  2016-08-29       Impact factor: 1.987

5.  Trinucleotide repeats in human genome and exome.

Authors:  Piotr Kozlowski; Mateusz de Mezer; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2010-03-09       Impact factor: 16.971

Review 6.  Computational and statistical approaches to analyzing variants identified by exome sequencing.

Authors:  Nathan O Stitziel; Adam Kiezun; Shamil Sunyaev
Journal:  Genome Biol       Date:  2011-09-14       Impact factor: 13.583

Review 7.  Systematic review of autosomal recessive ataxias and proposal for a classification.

Authors:  Marie Beaudin; Christopher J Klein; Guy A Rouleau; Nicolas Dupré
Journal:  Cerebellum Ataxias       Date:  2017-02-23

8.  Targeted high throughput sequencing in hereditary ataxia and spastic paraplegia.

Authors:  Zafar Iqbal; Siri L Rydning; Iselin M Wedding; Jeanette Koht; Lasse Pihlstrøm; Aina H Rengmark; Sandra P Henriksen; Chantal M E Tallaksen; Mathias Toft
Journal:  PLoS One       Date:  2017-03-31       Impact factor: 3.240

  8 in total
  8 in total

1.  Ode to the humble Southern blot in the era of exomes.

Authors:  Alex R Paciorkowski
Journal:  Neurol Clin Pract       Date:  2018-02

2.  Truncating SLC12A6 variants cause different clinical phenotypes in humans and dogs.

Authors:  Mario Van Poucke; Kimberley Stee; Laurien Sonck; Emmelie Stock; Leslie Bosseler; Jo Van Dorpe; Filip Van Nieuwerburgh; Dieter Deforce; Luc J Peelman; Luc Van Ham; Sofie F M Bhatti; Bart J G Broeckx
Journal:  Eur J Hum Genet       Date:  2019-06-03       Impact factor: 4.246

Review 3.  Three Adult-Onset Autosomal Recessive Ataxias: What Adult Neurologists Need to Know.

Authors:  Jordan A Paulus-Andres; Melinda S Burnett
Journal:  Neurol Clin Pract       Date:  2021-06

4.  Diagnosis of Spinocerebellar Ataxia in the West Indies.

Authors:  Ashley K Yearwood; Shruthi Rethi; Karla P Figueroa; Ruth H Walker; Andrew K Sobering
Journal:  Tremor Other Hyperkinet Mov (N Y)       Date:  2018-06-26

5.  Childhood-Onset Spinocerebellar Ataxia 3: Tongue Dystonia as an Early Manifestation.

Authors:  Nester Mitchell; Gaynel A LaTouche; Beverly Nelson; Karla P Figueroa; Ruth H Walker; Andrew K Sobering
Journal:  Tremor Other Hyperkinet Mov (N Y)       Date:  2019-09-13

6.  Prevalence of RFC1-mediated spinocerebellar ataxia in a North American ataxia cohort.

Authors:  Dona Aboud Syriani; Darice Wong; Sameer Andani; Claudio M De Gusmao; Yuanming Mao; May Sanyoura; Giacomo Glotzer; Paul J Lockhart; Sharon Hassin-Baer; Vikram Khurana; Christopher M Gomez; Susan Perlman; Soma Das; Brent L Fogel
Journal:  Neurol Genet       Date:  2020-05-20

7.  Identification of Genetic Risk Factors of Severe COVID-19 Using Extensive Phenotypic Data: A Proof-of-Concept Study in a Cohort of Russian Patients.

Authors:  Sergey G Shcherbak; Anton I Changalidi; Yury A Barbitoff; Anna Yu Anisenkova; Sergei V Mosenko; Zakhar P Asaulenko; Victoria V Tsay; Dmitrii E Polev; Roman S Kalinin; Yuri A Eismont; Andrey S Glotov; Evgeny Y Garbuzov; Alexander N Chernov; Olga A Klitsenko; Mikhail O Ushakov; Anton E Shikov; Stanislav P Urazov; Vladislav S Baranov; Oleg S Glotov
Journal:  Genes (Basel)       Date:  2022-03-17       Impact factor: 4.141

Review 8.  Human Induced Pluripotent Stem Cell-Based Modelling of Spinocerebellar Ataxias.

Authors:  Bart P C van de Warrenburg; Hans van Bokhoven; Marina P Hommersom; Ronald A M Buijsen; Willeke M C van Roon-Mom
Journal:  Stem Cell Rev Rep       Date:  2021-05-25       Impact factor: 5.739

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.