Literature DB >> 27572814

Utility of Whole Exome Sequencing for Genetic Diagnosis of Previously Undiagnosed Pediatric Neurology Patients.

Maya Kuperberg1, Dorit Lev2, Lubov Blumkin3, Ayelet Zerem4, Mira Ginsberg4, Ilan Linder4, Nirit Carmi4, Sarah Kivity4, Tally Lerman-Sagie3, Esther Leshinsky-Silver5.   

Abstract

Whole exome sequencing enables scanning a large number of genes for relatively low costs. The authors investigate its use for previously undiagnosed pediatric neurological patients. This retrospective cohort study performed whole exome sequencing on 57 patients of "Magen" neurogenetic clinics, with unknown diagnoses despite previous workup. The authors report on clinical features, causative genes, and treatment modifications and provide an analysis of whole exome sequencing utility per primary clinical feature. A causative gene was identified in 49.1% of patients, of which 17 had an autosomal dominant mutation, 9 autosomal recessive, and 2 X-linked. The highest rate of positive diagnosis was found for patients with developmental delay, ataxia, or suspected neuromuscular disease. Whole exome sequencing warranted a definitive change of treatment for 5 patients. Genetic databases were updated accordingly. In conclusion, whole exome sequencing is useful in obtaining a high detection rate for previously undiagnosed disorders. Use of this technique could affect diagnosis, treatment, and prognostics for both patients and relatives.
© The Author(s) 2016.

Entities:  

Keywords:  ataxia; developmental delay; exomics; genetics; neurology

Mesh:

Year:  2016        PMID: 27572814     DOI: 10.1177/0883073816664836

Source DB:  PubMed          Journal:  J Child Neurol        ISSN: 0883-0738            Impact factor:   1.987


  19 in total

Review 1.  Pitt-Hopkins Syndrome: A Review of Current Literature, Clinical Approach, and 23-Patient Case Series.

Authors:  Kimberly Goodspeed; Cassandra Newsom; Mary Ann Morris; Craig Powell; Patricia Evans; Sailaja Golla
Journal:  J Child Neurol       Date:  2018-01-10       Impact factor: 1.987

2.  A head-to-head evaluation of the diagnostic efficacy and costs of trio versus singleton exome sequencing analysis.

Authors:  Tiong Yang Tan; Sebastian Lunke; Belinda Chong; Dean Phelan; Miriam Fanjul-Fernandez; Justine E Marum; Vanessa Siva Kumar; Zornitza Stark; Alison Yeung; Natasha J Brown; Chloe Stutterd; Martin B Delatycki; Simon Sadedin; Melissa Martyn; Ilias Goranitis; Natalie Thorne; Clara L Gaff; Susan M White
Journal:  Eur J Hum Genet       Date:  2019-07-18       Impact factor: 4.246

3.  Exome Sequencing in Children.

Authors:  Elisa A Mahler; Jessika Johannsen; Konstantinos Tsiakas; Katja Kloth; Sabine Lüttgen; Chris Mühlhausen; Bader Alhaddad; Tobias B Haack; Tim M Strom; Fanny Kortüm; Thomas Meitinger; Ania C Muntau; René Santer; Christian Kubisch; Davor Lessel; Jonas Denecke; Maja Hempel
Journal:  Dtsch Arztebl Int       Date:  2019-03-22       Impact factor: 5.594

4.  Exome and genome sequencing for pediatric patients with congenital anomalies or intellectual disability: an evidence-based clinical guideline of the American College of Medical Genetics and Genomics (ACMG).

Authors:  Kandamurugu Manickam; Monica R McClain; Laurie A Demmer; Sawona Biswas; Hutton M Kearney; Jennifer Malinowski; Lauren J Massingham; Danny Miller; Timothy W Yu; Fuki M Hisama
Journal:  Genet Med       Date:  2021-07-01       Impact factor: 8.822

Review 5.  Clinical and therapeutic significance of genetic variation in the GRIN gene family encoding NMDARs.

Authors:  Tim A Benke; Kristen Park; Ilona Krey; Chad R Camp; Rui Song; Amy J Ramsey; Hongjie Yuan; Stephen F Traynelis; Johannes Lemke
Journal:  Neuropharmacology       Date:  2021-09-22       Impact factor: 5.250

6.  Clinical providers' experiences with returning results from genomic sequencing: an interview study.

Authors:  Julia Wynn; Katie Lewis; Laura M Amendola; Barbara A Bernhardt; Sawona Biswas; Manasi Joshi; Carmit McMullen; Sarah Scollon
Journal:  BMC Med Genomics       Date:  2018-05-08       Impact factor: 3.063

7.  Genome-Wide Sequencing for Unexplained Developmental Disabilities or Multiple Congenital Anomalies: A Health Technology Assessment.

Authors: 
Journal:  Ont Health Technol Assess Ser       Date:  2020-03-06

Review 8.  Genetic Counseling in Neurodevelopmental Disorders.

Authors:  Alyssa Blesson; Julie S Cohen
Journal:  Cold Spring Harb Perspect Med       Date:  2020-04-01       Impact factor: 6.915

Review 9.  Molecular genetic testing for hereditary ataxia: What every neurologist should know.

Authors:  Stephanie E Wallace; Thomas D Bird
Journal:  Neurol Clin Pract       Date:  2018-02

10.  Genomic diagnostics within a medically underserved population: efficacy and implications.

Authors:  Kevin A Strauss; Claudia Gonzaga-Jauregui; Karlla W Brigatti; Katie B Williams; Alejandra K King; Cristopher Van Hout; Donna L Robinson; Millie Young; Kavita Praveen; Adam D Heaps; Mindy Kuebler; Aris Baras; Jeffrey G Reid; John D Overton; Frederick E Dewey; Robert N Jinks; Ian Finnegan; Scott J Mellis; Alan R Shuldiner; Erik G Puffenberger
Journal:  Genet Med       Date:  2017-07-20       Impact factor: 8.822

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