Literature DB >> 29483651

Cryo-EM and X-ray structures of TRPV4 reveal insight into ion permeation and gating mechanisms.

Zengqin Deng1,2, Navid Paknejad3, Grigory Maksaev1,2, Monica Sala-Rabanal1,2, Colin G Nichols1,2, Richard K Hite4, Peng Yuan5,6.   

Abstract

The transient receptor potential (TRP) channel TRPV4 participates in multiple biological processes, and numerous TRPV4 mutations underlie several distinct and devastating diseases. Here we present the cryo-EM structure of Xenopus tropicalis TRPV4 at 3.8-Å resolution. The ion-conduction pore contains an intracellular gate formed by the inner helices, but lacks any extracellular gate in the selectivity filter, as observed in other TRPV channels. Anomalous X-ray diffraction analyses identify a single ion-binding site in the selectivity filter, thus explaining TRPV4 nonselectivity. Structural comparisons with other TRP channels and distantly related voltage-gated cation channels reveal an unprecedented, unique packing interface between the voltage-sensor-like domain and the pore domain, suggesting distinct gating mechanisms. Moreover, our structure begins to provide mechanistic insights to the large set of pathogenic mutations, offering potential opportunities for drug development.

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Year:  2018        PMID: 29483651      PMCID: PMC6252174          DOI: 10.1038/s41594-018-0037-5

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  85 in total

1.  Temperature-modulated diversity of TRPV4 channel gating: activation by physical stresses and phorbol ester derivatives through protein kinase C-dependent and -independent pathways.

Authors:  Xiaochong Gao; Ling Wu; Roger G O'Neil
Journal:  J Biol Chem       Date:  2003-05-08       Impact factor: 5.157

2.  Structures of the Human HCN1 Hyperpolarization-Activated Channel.

Authors:  Chia-Hsueh Lee; Roderick MacKinnon
Journal:  Cell       Date:  2017-01-12       Impact factor: 41.582

3.  HOLE: a program for the analysis of the pore dimensions of ion channel structural models.

Authors:  O S Smart; J G Neduvelil; X Wang; B A Wallace; M S Sansom
Journal:  J Mol Graph       Date:  1996-12

4.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

5.  Impaired osmotic sensation in mice lacking TRPV4.

Authors:  Atsuko Mizuno; Naoko Matsumoto; Masashi Imai; Makoto Suzuki
Journal:  Am J Physiol Cell Physiol       Date:  2003-07       Impact factor: 4.249

Review 6.  An introduction to TRP channels.

Authors:  I Scott Ramsey; Markus Delling; David E Clapham
Journal:  Annu Rev Physiol       Date:  2006       Impact factor: 19.318

7.  Heat-evoked activation of the ion channel, TRPV4.

Authors:  Ali Deniz Güler; Hyosang Lee; Tohko Iida; Isao Shimizu; Makoto Tominaga; Michael Caterina
Journal:  J Neurosci       Date:  2002-08-01       Impact factor: 6.167

8.  CTFFIND4: Fast and accurate defocus estimation from electron micrographs.

Authors:  Alexis Rohou; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2015-08-13       Impact factor: 2.867

9.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

10.  TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.

Authors:  Yuan Gao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2016-05-18       Impact factor: 49.962

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  70 in total

Review 1.  Membrane protein structural biology in the era of single particle cryo-EM.

Authors:  Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2018-09-13       Impact factor: 6.809

Review 2.  Transient Receptor Potential Channels and Endothelial Cell Calcium Signaling.

Authors:  Pratish Thakore; Scott Earley
Journal:  Compr Physiol       Date:  2019-06-12       Impact factor: 9.090

Review 3.  Transient Receptor Potential Channels and Calcium Signaling.

Authors:  Laura Vangeel; Thomas Voets
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

Review 4.  Cryo-EM in drug discovery: achievements, limitations and prospects.

Authors:  Jean-Paul Renaud; Ashwin Chari; Claudio Ciferri; Wen-Ti Liu; Hervé-William Rémigy; Holger Stark; Christian Wiesmann
Journal:  Nat Rev Drug Discov       Date:  2018-06-08       Impact factor: 84.694

5.  Magnetic Entropy as a Proposed Gating Mechanism for Magnetogenetic Ion Channels.

Authors:  Guillaume Duret; Sruthi Polali; Erin D Anderson; A Martin Bell; Constantine N Tzouanas; Benjamin W Avants; Jacob T Robinson
Journal:  Biophys J       Date:  2019-01-08       Impact factor: 4.033

6.  Structural insight into TRPV5 channel function and modulation.

Authors:  Shangyu Dang; Mark K van Goor; Daniel Asarnow; YongQiang Wang; David Julius; Yifan Cheng; Jenny van der Wijst
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-11       Impact factor: 11.205

Review 7.  Structural insights into the gating mechanisms of TRPV channels.

Authors:  Ruth A Pumroy; Edwin C Fluck; Tofayel Ahmed; Vera Y Moiseenkova-Bell
Journal:  Cell Calcium       Date:  2020-01-24       Impact factor: 6.817

Review 8.  Discoveries in structure and physiology of mechanically activated ion channels.

Authors:  J M Kefauver; A B Ward; A Patapoutian
Journal:  Nature       Date:  2020-11-25       Impact factor: 49.962

9.  The Contribution of the Ankyrin Repeat Domain of TRPV1 as a Thermal Module.

Authors:  Ernesto Ladrón-de-Guevara; Laura Dominguez; Gisela E Rangel-Yescas; Daniel A Fernández-Velasco; Alfredo Torres-Larios; Tamara Rosenbaum; Leon D Islas
Journal:  Biophys J       Date:  2019-11-11       Impact factor: 4.033

Review 10.  What is new about mild temperature sensing? A review of recent findings.

Authors:  Miriam García-Ávila; León D Islas
Journal:  Temperature (Austin)       Date:  2019-04-29
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