Literature DB >> 2948154

A sequence upstream from the coding region is required for the transcription of the 7SK RNA genes.

S Murphy, M Tripodi, M Melli.   

Abstract

We have isolated and characterized two recombinant lambda phages containing sequences homologous to 7SK RNA which code for a RNA 330 nucleotides long in an "in vitro" transcription system. S1 mapping of the transcript shows that this RNA corresponds to the 7SK RNA obtained from human cells, indicating that the two recombinant phages contain genes coding for 7SK RNA. The transcription of these genes is polymerase III dependent. Sequences upstream from the start of transcription are essential for "in vitro" synthesis of 7SK RNA, suggesting that internal promoter elements, if present, are not sufficient to support the synthesis of 7SK RNA. A region of homology with the upstream sequences of the genes for U6 RNA, 7SL RNA and Bombyx mori alanine tRNA is found within 50 bp from the transcription start point. Within the homologous region a motif common to the four genes is a "TATA"-like box, placed at position -30 to -25 of the 7SK RNA gene, which is typical of the polymerase II promoter region.

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Year:  1986        PMID: 2948154      PMCID: PMC311956          DOI: 10.1093/nar/14.23.9243

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

Review 1.  Transcription by RNA polymerase III.

Authors:  G Ciliberto; L Castagnoli; R Cortese
Journal:  Curr Top Dev Biol       Date:  1983       Impact factor: 4.897

2.  Common and interchangeable elements in the promoters of genes transcribed by RNA polymerase iii.

Authors:  G Ciliberto; G Raugei; F Costanzo; L Dente; R Cortese
Journal:  Cell       Date:  1983-03       Impact factor: 41.582

3.  A short 5' flanking region containing conserved sequences is required for silkworm alanine tRNA gene activity.

Authors:  D Larson; J Bradford-Wilcox; L S Young; K U Sprague
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

4.  The isolation and characterization of linked delta- and beta-globin genes from a cloned library of human DNA.

Authors:  R M Lawn; E F Fritsch; R C Parker; G Blake; T Maniatis
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

5.  Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Authors:  J D Dignam; R M Lebovitz; R G Roeder
Journal:  Nucleic Acids Res       Date:  1983-03-11       Impact factor: 16.971

6.  DNA sequences complementary to human 7 SK RNA show structural similarities to the short mobile elements of the mammalian genome.

Authors:  S Murphy; F Altruda; E Ullu; M Tripodi; L Silengo; M Melli
Journal:  J Mol Biol       Date:  1984-08-25       Impact factor: 5.469

7.  Sequences of four tRNA genes from Caenorhabditis elegans and the expression of C. elegans tRNALeu (anticodon IAG) in Xenopus oocytes.

Authors:  T A Tranquilla; R Cortese; D Melton; J D Smith
Journal:  Nucleic Acids Res       Date:  1982-12-20       Impact factor: 16.971

8.  Characterization of two xenopus somatic 5S DNAs and one minor oocyte-specific 5S DNA.

Authors:  R C Peterson; J L Doering; D D Brown
Journal:  Cell       Date:  1980-05       Impact factor: 41.582

9.  Nucleotide sequences in Xenopus 5S DNA required for transcription termination.

Authors:  D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1981-04       Impact factor: 41.582

10.  The cDNA sequences of the sea urchin U7 small nuclear RNA suggest specific contacts between histone mRNA precursor and U7 RNA during RNA processing.

Authors:  K Strub; G Galli; M Busslinger; M L Birnstiel
Journal:  EMBO J       Date:  1984-12-01       Impact factor: 11.598

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  24 in total

1.  Transcription of the human U2 snRNA genes continues beyond the 3' box in vivo.

Authors:  P Cuello; D C Boyd; M J Dye; N J Proudfoot; S Murphy
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

2.  Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies.

Authors:  Angela M Domitrovich; Gary R Kunkel
Journal:  Nucleic Acids Res       Date:  2003-05-01       Impact factor: 16.971

3.  Organization and transient expression of the gene for human U11 snRNA.

Authors:  C Suter-Crazzolara; W Keller
Journal:  Gene Expr       Date:  1991-05

4.  Structure and transcription of a human gene for H1 RNA, the RNA component of human RNase P.

Authors:  M Baer; T W Nilsen; C Costigan; S Altman
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

5.  Regional and temporal specialization in the nucleus: a transcriptionally-active nuclear domain rich in PTF, Oct1 and PIKA antigens associates with specific chromosomes early in the cell cycle.

Authors:  A Pombo; P Cuello; W Schul; J B Yoon; R G Roeder; P R Cook; S Murphy
Journal:  EMBO J       Date:  1998-03-16       Impact factor: 11.598

6.  Downregulation of RNA polymerase III transcription of the hY3 gene in vitro.

Authors:  A Kelekar; J D Keene
Journal:  Mol Biol Rep       Date:  1990       Impact factor: 2.316

7.  Transcription of human 7S K DNA in vitro and in vivo is exclusively controlled by an upstream promoter.

Authors:  H Kleinert; B J Benecke
Journal:  Nucleic Acids Res       Date:  1988-02-25       Impact factor: 16.971

8.  Compilation of small RNA sequences.

Authors:  R Reddy
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

Review 9.  The Bin3 RNA methyltransferase targets 7SK RNA to control transcription and translation.

Authors:  Michael S Cosgrove; Ye Ding; William A Rennie; Michael J Lane; Steven D Hanes
Journal:  Wiley Interdiscip Rev RNA       Date:  2012-06-27       Impact factor: 9.957

10.  Genomic organization, 5'-flanking region and chromosomal localization of the human glutathione transferase A4 gene.

Authors:  F Desmots; C Rauch; C Henry; A Guillouzo; F Morel
Journal:  Biochem J       Date:  1998-12-01       Impact factor: 3.857

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