Literature DB >> 2450332

Transcription of human 7S K DNA in vitro and in vivo is exclusively controlled by an upstream promoter.

H Kleinert1, B J Benecke.   

Abstract

We have analyzed the transcription of a recently isolated human 7S K RNA gene in vitro and in vivo. In contrast to hitherto characterized class III genes (genes transcribed by RNA polymerase III), the coding sequence of this gene is not required for faithful and efficient transcription by RNA polymerase III. In fact, a procaryotic vector DNA sequence was efficiently transcribed by RNA polymerase III under the control of the 7S K RNA gene upstream sequence in vitro and in vivo. S1-nuclease protection analyses confirmed that the 7S K 5'flanking sequence was sufficient for accurate transcription initiation. These data demonstrate that 7S K DNA represents a novel class III gene, the promoter elements of which are located outside the coding sequence.

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Year:  1988        PMID: 2450332      PMCID: PMC336317          DOI: 10.1093/nar/16.4.1319

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  36 in total

1.  A sequence upstream from the coding region is required for the transcription of the 7SK RNA genes.

Authors:  S Murphy; M Tripodi; M Melli
Journal:  Nucleic Acids Res       Date:  1986-12-09       Impact factor: 16.971

2.  Formation of a rate-limiting intermediate in 5S RNA gene transcription.

Authors:  J J Bieker; P L Martin; R G Roeder
Journal:  Cell       Date:  1985-01       Impact factor: 41.582

Review 3.  Transcription of class III genes: formation of preinitiation complexes.

Authors:  A B Lassar; P L Martin; R G Roeder
Journal:  Science       Date:  1983-11-18       Impact factor: 47.728

4.  A split promoter for a eucaryotic tRNA gene.

Authors:  H Hofstetter; A Kressman; M L Birnstiel
Journal:  Cell       Date:  1981-05       Impact factor: 41.582

5.  The binding of a transcription factor to deletion mutants of a 5S ribosomal RNA gene.

Authors:  S Sakonju; D D Brown; D Engelke; S Y Ng; B S Shastry; R G Roeder
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

6.  Reinitiation of synthesis of small cytoplasmic RNA species K and L in isolated HeLa cell nuclei in vitro.

Authors:  R Reichel; B J Benecke
Journal:  Nucleic Acids Res       Date:  1980-01-25       Impact factor: 16.971

7.  The nucleotide sequence of the initiation and termination sites for ribosomal RNA transcription in X. laevis.

Authors:  B Sollner-Webb; R H Reeder
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

8.  A new class of small nuclear RNA molecules synthesized by a type I RNA polymerase in HeLa cells.

Authors:  B J Benecke; S Penman
Journal:  Cell       Date:  1977-12       Impact factor: 41.582

9.  Upstream sequences modulate the internal promoter of the human 7SL RNA gene.

Authors:  E Ullu; A M Weiner
Journal:  Nature       Date:  1985 Nov 28-Dec 4       Impact factor: 49.962

10.  Nucleotide sequences in Xenopus 5S DNA required for transcription termination.

Authors:  D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1981-04       Impact factor: 41.582

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  15 in total

1.  Two internal sequence elements modulate transcription from the external human 7S K RNA gene promoter in vivo.

Authors:  B Sandrock; B J Benecke
Journal:  Gene Expr       Date:  1999

2.  Efficient transcription of the EBER2 gene depends on the structural integrity of the RNA.

Authors:  Edda Dümpelmann; Hendrik Mittendorf; Bernd-Joachim Benecke
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

3.  Complex requirements for RNA polymerase III transcription of the Xenopus U6 promoter.

Authors:  K A Simmen; I W Mattaj
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

4.  Transcription of a human U6 small nuclear RNA gene in vivo withstands deletion of intragenic sequences but not of an upstream TATATA box.

Authors:  G R Kunkel; T Pederson
Journal:  Nucleic Acids Res       Date:  1989-09-25       Impact factor: 16.971

5.  BC1 RNA: transcriptional analysis of a neural cell-specific RNA polymerase III transcript.

Authors:  J A Martignetti; J Brosius
Journal:  Mol Cell Biol       Date:  1995-03       Impact factor: 4.272

6.  A highly specific terminal uridylyl transferase modifies the 3'-end of U6 small nuclear RNA.

Authors:  R Trippe; B Sandrock; B J Benecke
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

7.  An RNA polymerase II promoter containing sequences upstream and downstream from the RNA startpoint that direct initiation of transcription from the same site.

Authors:  Y Nakatani; M Brenner; E Freese
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

8.  The seemingly identical 7SK and U6 core promoters depend on different transcription factor complexes.

Authors:  D Sürig; S Bredow; B J Benecke
Journal:  Gene Expr       Date:  1993

9.  U6 snRNA genes of Arabidopsis are transcribed by RNA polymerase III but contain the same two upstream promoter elements as RNA polymerase II-transcribed U-snRNA genes.

Authors:  F Waibel; W Filipowicz
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

10.  Amplification of plant U3 and U6 snRNA gene sequences using primers specific for an upstream promoter element and conserved intragenic regions.

Authors:  C Marshallsay; T Kiss; W Filipowicz
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

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