Literature DB >> 29475996

Chemical Screening Using Cell-Free Xenopus Egg Extract.

Matthew R Broadus1, Ethan Lee2.   

Abstract

Most drug screening methods use purified proteins, cultured cells, and/or small model organisms such as Xenopus, zebrafish, flies, or nematodes. These systems have proven successes in drug discovery, but they also have weaknesses. Although purified cellular components allow for identification of compounds with activity against specific targets, such systems lack the complex biological interactions present in cellular and organismal screens. In vivo systems overcome these weaknesses, but the lack of cellular permeability, efflux by cellular pumps, and/or toxicity can be major limitations. Xenopus laevis egg extract, a concentrated and biologically active cytosol, can potentially overcome these weaknesses. Drug interactions occur in a near-physiological milieu, thereby functioning in a "truer" endogenous manner than purified components. Also, Xenopus egg extract is a cell-free system that lacks intact plasma membranes that could restrict drug access to potential targets. Finally, Xenopus egg extract is readily manipulated at the protein level: Proteins are easily depleted or added to the system, an important feature for analyzing drug effects in disease states. Thus, Xenopus egg extract offers an attractive media for screening drugs that merges strengths of both in vitro and in vivo systems.
© 2018 Cold Spring Harbor Laboratory Press.

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Year:  2018        PMID: 29475996      PMCID: PMC6368528          DOI: 10.1101/pdb.prot098277

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  25 in total

1.  A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays.

Authors: 
Journal:  J Biomol Screen       Date:  1999

Review 2.  In vitro study of nuclear assembly and nuclear import using Xenopus egg extracts.

Authors:  Rene C Chan; Douglass I Forbes
Journal:  Methods Mol Biol       Date:  2006

3.  Nuclear reconstitution in vitro: stages of assembly around protein-free DNA.

Authors:  J Newport
Journal:  Cell       Date:  1987-01-30       Impact factor: 41.582

Review 4.  Methods for studying spindle assembly and chromosome condensation in Xenopus egg extracts.

Authors:  Thomas J Maresca; Rebecca Heald
Journal:  Methods Mol Biol       Date:  2006

Review 5.  Probing the biology of cell boundary conditions through confinement of Xenopus cell-free cytoplasmic extracts.

Authors:  Jessica G Bermudez; Hui Chen; Lily C Einstein; Matthew C Good
Journal:  Genesis       Date:  2017-01       Impact factor: 2.487

6.  Reconstitution Of β-catenin degradation in Xenopus egg extract.

Authors:  Tony W Chen; Matthew R Broadus; Stacey S Huppert; Ethan Lee
Journal:  J Vis Exp       Date:  2014-06-17       Impact factor: 1.355

7.  A novel cell-free screen identifies a potent inhibitor of the Fanconi anemia pathway.

Authors:  Igor Landais; Alexandra Sobeck; Stacie Stone; Alexis LaChapelle; Maureen E Hoatlin
Journal:  Int J Cancer       Date:  2009-02-15       Impact factor: 7.396

8.  Ubistatins inhibit proteasome-dependent degradation by binding the ubiquitin chain.

Authors:  Rati Verma; Noel R Peters; Mariapina D'Onofrio; Gregory P Tochtrop; Kathleen M Sakamoto; Ranjani Varadan; Mingsheng Zhang; Philip Coffino; David Fushman; Raymond J Deshaies; Randall W King
Journal:  Science       Date:  2004-10-01       Impact factor: 47.728

9.  Obtaining eggs from Xenopus laevis females.

Authors:  Marie K Cross; Maureen Powers
Journal:  J Vis Exp       Date:  2008-08-20       Impact factor: 1.355

10.  Preparation and fractionation of Xenopus laevis egg extracts.

Authors:  Marie K Cross; Maureen Powers
Journal:  J Vis Exp       Date:  2008-08-27       Impact factor: 1.355

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