Literature DB >> 29473738

Surface Charge Modulates Protein-Protein Interactions in Physiologically Relevant Environments.

Alex J Guseman, Shannon L Speer, Gerardo M Perez Goncalves, Gary J Pielak.   

Abstract

Protein-protein interactions are fundamental to biology yet are rarely studied under physiologically relevant conditions where the concentration of macromolecules can exceed 300 g/L. These high concentrations cause cosolute-complex contacts that are absent in dilute buffer. Understanding such interactions is important because they organize the cellular interior. We used 19F nuclear magnetic resonance, the dimer-forming A34F variant of the model protein GB1, and the cosolutes bovine serum albumin (BSA) and lysozyme to assess the effects of repulsive and attractive charge-charge dimer-cosolute interactions on dimer stability. The interactions were also manipulated via charge-change variants and by changing the pH. Charge-charge repulsions between BSA and GB1 stabilize the dimer, and the effects of lysozyme indicate a role for attractive interactions. The data show that chemical interactions can regulate the strength of protein-protein interactions under physiologically relevant crowded conditions and suggest a mechanism for tuning the equilibrium thermodynamics of protein-protein interactions in cells.

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Year:  2018        PMID: 29473738      PMCID: PMC5977980          DOI: 10.1021/acs.biochem.8b00061

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-21       Impact factor: 11.205

3.  Quinary structure modulates protein stability in cells.

Authors:  William B Monteith; Rachel D Cohen; Austin E Smith; Emilio Guzman-Cisneros; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-26       Impact factor: 11.205

4.  Quinary interactions with an unfolded state ensemble.

Authors:  Rachel D Cohen; Gary J Pielak
Journal:  Protein Sci       Date:  2017-06-12       Impact factor: 6.725

5.  Unexpected effects of macromolecular crowding on protein stability.

Authors:  Laura A Benton; Austin E Smith; Gregory B Young; Gary J Pielak
Journal:  Biochemistry       Date:  2012-11-27       Impact factor: 3.162

6.  Exploring weak, transient protein--protein interactions in crowded in vivo environments by in-cell nuclear magnetic resonance spectroscopy.

Authors:  Qinghua Wang; Anastasia Zhuravleva; Lila M Gierasch
Journal:  Biochemistry       Date:  2011-10-05       Impact factor: 3.162

Review 7.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

Authors:  Francois-Xavier Theillet; Andres Binolfi; Tamara Frembgen-Kesner; Karan Hingorani; Mohona Sarkar; Ciara Kyne; Conggang Li; Peter B Crowley; Lila Gierasch; Gary J Pielak; Adrian H Elcock; Anne Gershenson; Philipp Selenko
Journal:  Chem Rev       Date:  2014-06-05       Impact factor: 60.622

Review 8.  Complexes of sequential metabolic enzymes.

Authors:  P A Srere
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

9.  Molecular evolution, intracellular organization, and the quinary structure of proteins.

Authors:  E H McConkey
Journal:  Proc Natl Acad Sci U S A       Date:  1982-05       Impact factor: 11.205

10.  Characterization of specific protein association by 15N CPMG relaxation dispersion NMR: the GB1(A34F) monomer-dimer equilibrium.

Authors:  Jungoo Jee; Rieko Ishima; Angela M Gronenborn
Journal:  J Phys Chem B       Date:  2007-11-16       Impact factor: 2.991

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  13 in total

1.  Assessing the Structures and Interactions of γD-Crystallin Deamidation Variants.

Authors:  Alex J Guseman; Matthew J Whitley; Jeremy J González; Nityam Rathi; Mikayla Ambarian; Angela M Gronenborn
Journal:  Structure       Date:  2020-12-01       Impact factor: 5.006

2.  Protein shape modulates crowding effects.

Authors:  Alex J Guseman; Gerardo M Perez Goncalves; Shannon L Speer; Gregory B Young; Gary J Pielak
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-09       Impact factor: 11.205

3.  The intracellular environment affects protein-protein interactions.

Authors:  Shannon L Speer; Wenwen Zheng; Xin Jiang; I-Te Chu; Alex J Guseman; Maili Liu; Gary J Pielak; Conggang Li
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 11.205

4.  The anatomy of unfolding of Yfh1 is revealed by site-specific fold stability analysis measured by 2D NMR spectroscopy.

Authors:  Rita Puglisi; Gogulan Karunanithy; D Flemming Hansen; Annalisa Pastore; Piero Andrea Temussi
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5.  In-cell destabilization of a homodimeric protein complex detected by DEER spectroscopy.

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-11       Impact factor: 11.205

6.  Preferential Interactions of a Crowder Protein with the Specific Binding Site of a Native Protein Complex.

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Review 7.  Modulating the foreign body response of implants for diabetes treatment.

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Journal:  Adv Drug Deliv Rev       Date:  2021-01-21       Impact factor: 17.873

8.  Macromolecular Crowding Tunes Protein Stability by Manipulating Solvent Accessibility.

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Journal:  Chembiochem       Date:  2019-02-11       Impact factor: 3.164

9.  Quantifying the thermodynamics of protein unfolding using 2D NMR spectroscopy.

Authors:  Rita Puglisi; Oliver Brylski; Caterina Alfano; Stephen R Martin; Annalisa Pastore; Piero A Temussi
Journal:  Commun Chem       Date:  2020-08-07

10.  Transcription and Translation in Cytomimetic Protocells Perform Most Efficiently at Distinct Macromolecular Crowding Conditions.

Authors:  Mahesh A Vibhute; Mark H Schaap; Roel J M Maas; Frank H T Nelissen; Evan Spruijt; Hans A Heus; Maike M K Hansen; Wilhelm T S Huck
Journal:  ACS Synth Biol       Date:  2020-10-05       Impact factor: 5.110

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