| Literature DB >> 29467012 |
Yu Han1, Lin-Feng Yan1, Xi-Bin Wang2, Ying-Zhi Sun1, Xin Zhang1, Zhi-Cheng Liu1, Hai-Yan Nan1, Yu-Chuan Hu1, Yang Yang1, Jin Zhang1, Ying Yu1, Qian Sun1, Qiang Tian1, Bo Hu1, Gang Xiao1, Wen Wang3, Guang-Bin Cui4.
Abstract
BACKGROUND: The methylation status of oxygen 6-methylguanine-DNA methyltransferase (MGMT) promoter has been associated with treatment response in glioblastoma(GBM). Using pre-operative MRI techniques to predict MGMT promoter methylation status remains inconclusive. In this study, we investigated the value of features from structural and advanced imagings in predicting the methylation of MGMT promoter in primary glioblastoma patients.Entities:
Keywords: 3-diminsional pseudo-continuous arterial spin labeling (3D pCASL) imaging; Apparent diffusion coefficient (ADC); Glioblastoma; Image feature; Oxygen 6-methylguanine-DNA methyltransferase (MGMT) promoter
Mesh:
Substances:
Year: 2018 PMID: 29467012 PMCID: PMC5822523 DOI: 10.1186/s12885-018-4114-2
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Fig. 1Flow diagram for the patients selection
Image definition
| Variable | Classification criteria |
|---|---|
| Location | |
| Type I | Tumor in which the contrast-enhancing lesion contacts both the SVZ and the cortex |
| Type II | Tumor contacts the SVZ but not the cortex |
| Type III | Tumor contacts the cortex but not the SVZ |
| Type IV | Tumor contacts neither the SVZ nor the cortex |
| Tumor cross midline | |
| No | Tumor is limited to the unilateral cerebral hemisphere |
| Yes | Tumor crosses the brain midline and extends into contralateral cerebral hemisphere |
| Multifocal | |
| No | Only one region of tumor, either enhancing or non-enhancing |
| Yes | At least a region of tumor, either enhancing or non-enhancing, which is not contiguous with the major tumor mass |
| Necrosis | |
| No | No necrosis within the tumor |
| Mild | Necrosis affecting ≤50% of the tumor |
| Severe | Necrosis affecting > 50% of the tumor |
| Cyst | |
| No | No cyst in the tumor |
| Yes | Cyst in the tumor |
| Edema | |
| No | No convincing edema |
| Mild | Edema extending ≤2 cm from tumor margin |
| Severe | Edema extending > 2 cm from tumor margin |
| Enhancement | |
| Nodular | Largest focal contrast-enhancement diameter of tumor ≤1.5 cm |
| Patchy | Maximum contrast-enhancement diameter of tumor>1.5 cm |
| Ringlike | Cystic necrosis with peripheral enhancement |
| Side | |
| Left | Tumor located in left cerebral hemisphere |
| Right | Tumor located in right cerebral hemisphere |
Note: Location classification was based on the spatial relationship of the contrast-enhancing lesion to the subventricular zone. (SVZ = subventricular zone)
Correlations between MGMT status and image features
| Unmethylated | Methylated | Total | ||
|---|---|---|---|---|
| Location, n (%) | 0.012 | |||
| Type I | 12/48 (25) | 12/44 (27) | 24/92 (26) | |
| Type II | 16/48 (33) | 4/44 (9) | 20/92 (22) | |
| Type III | 18/48 (39) | 20/ 44 (45) | 38/92 (41) | |
| Type IV | 2/48 (4) | 8 /44 (18) | 10/92 (11) | |
| Tumor cross midline, n (%) | 0.478 | |||
| No | 38/48 (79) | 36/44 (82) | 74/92 (80) | |
| Yes | 10/48 (21) | 8/44 (18) | 18/92 (20) | |
| Multifocal, n (%) | 0.114 | |||
| No | 39/48 (81) | 30/44 (68) | 69/92 (75) | |
| Yes | 9/48 (19) | 14/44 (32) | 23/92 (25) | |
| Necrosis, n (%) | 0.028 | |||
| No | 2/48 (4) | 0 | 2/92 (2) | |
| Mild | 26/48 (54) | 15/44 (34) | 41/92 (45) | |
| Severe | 20/48 (42) | 29/44 (66) | 49/92 (53) | |
| Cyst, n (%) | 0.335 | |||
| No | 40/48 (83) | 39/44 (87) | 79/92 (86) | |
| Yes | 8/48 (17) | 5/44 (13) | 13/92 (14) | |
| Edema, n (%) | 0.688 | |||
| No | 10/48 (21) | 6/44 (14) | 16/92 (17) | |
| Mild | 25/48 (52) | 26/44 (59) | 51/92 (55) | |
| Severe | 13/48 (27) | 12/44 (27) | 25/92 (28) | |
| Enhancement, n (%) | 0.259 | |||
| Nodular | 11/48 (23) | 9/44 (20) | 20/92 (22) | |
| Patchy | 7/48 (15) | 2/44 (5) | 9/92 (10) | |
| Ringlike | 30/48 (62) | 33/44 (75) | 63/92 (68) | |
| Side, n (%) | 0.720 | |||
| Left | 20/48 (42) | 19/44 (43) | 39/92 (42) | |
| Right | 22/48 (46) | 17/44 (39) | 39/92 (42) | |
| Midline | 6/48 (12) | 8/44 (18) | 14/92 (16) |
Note: The P values* were calculated from the Fisher’s exact test
Differences in ADC and rCBF values between MGMT (−) and MGMT (+) (±s)
| Values | MGMT(−) | MGMT(+) | t | |
|---|---|---|---|---|
| rCBF | 9.467 ± 2.706 | 5.916 ± 2.518 | 5.945 | < 0.001 |
| ADC (×10−3 mm2/s) | 0.729 ± 0.085 | 0.899 ± 0.137 | 6.514 | < 0.001 |
Note: ADC = apparent diffusion coefficient, rCBF = relative cerebral blood flow, MGMT (−) = MGMT promoter unmethylated, MGMT (+) = MGMT promoter methylated
The P values* were calculated from the independent sample t test
Fig. 2Structural (a, b, c and d) and advanced (e, f, g and h) MR images obtained from a 53-year-old female showing left frontal lobe GBM with MGMT promoter methylation. a Precontrast T1-weighted image. b Fluid-attenuated inversion recovery image. c T2-weighted image. d Postcontrast T1-weighted image. e DWI map. f ADC map: the mean ADC value of the three small ROI was 0.722 × 10− 3 mm2/s. g The map fused CBF and 3D–T1WI/C. h CBF map: the mean rCBF of the three small ROI was 3.94
Fig. 3Structural (a, b, c and d) and advanced (e, f, g and h) MR images obtained from a 55-year-old male showing right temporal and parietal lobe GBM without MGMT promoter methylation. a Precontrast T1-weighted image. b Fluid-attenuated inversion recovery image. c T2-weighted image. d Postcontrast T1-weighted image. e DWI map. f ADC map: the mean ADC value of the three small ROI was 0.661 × 10− 3 mm2/s. g The map fused CBF and 3D–T1WI/C. h CBF map: the mean rCBF of the three small ROI was 10.64
ROC and LOOCV of ADC and rCBF values for differentiating MGMT (+) from MGMT (−)
| Values | AUC | Sensitivity (%) | Specificity (%) | Cutoff value | LOOCV | LOOCV |
|---|---|---|---|---|---|---|
| rCBF | 0.835 | 75.0 | 78.4 | 7.680 | 74.0 | 0.814 |
| ADC (×10−3 mm2/s) | 0.860 | 81.1 | 82.5 | 0.792 | 79.2 | 0.842 |
Note: ADC = apparent diffusion coefficient, rCBF = relative cerebral blood flow, AUC = area under ROC curve, LOOCV = leave-one-out cross-validation, MGMT (−) = MGMT promoter unmethylated, MGMT (+) = MGMT promoter methylated
Comparison of AUC of the varied MRI parameter combinations
| Values | AUC | Sensitivity (%) | Specificity (%) | LOOCV | LOOCV |
|---|---|---|---|---|---|
| rCBF + ADC | 0.893 | 83.1 | 83.2 | 81.8 | 0.871 |
| Location + Necrosis | 0.670 | 62.3 | 62.3 | 53.2 | 0.597 |
| rCBF + Location + Necrosis | 0.852 | 77.9 | 77.6 | 72.7 | 0.821 |
| ADC + Location + Necrosis | 0.891 | 80.5 | 80.2 | 79.2 | 0.845 |
| ALL | 0.914 | 85.7 | 85.2 | 80.5 | 0.877 |
Note: ADC = apparent diffusion coefficient, rCBF = relative cerebral blood flow, AUC = area under ROC curve, LOOCV = leave-one-out cross-validation, ALL = ADC + rCBF + Location + Necrosis
Intraclass Correlation Coefficient between the two readers
| Values | ICC | 95% CI | |
|---|---|---|---|
| rCBF | 0.921 | < 0.001 | 0.875–0.950 |
| ADC (×10−3 mm2/s) | 0.911 | < 0.001 | 0.860–0.943 |
Note: P values were calculated from intraclass correlation coefficient with the two-way random model