| Literature DB >> 29451888 |
José de Jesús Sánchez González1, José Ariel Ruiz Corral2, Guillermo Medina García3, Gabriela Ramírez Ojeda2, Lino De la Cruz Larios1, James Brendan Holland4, Roberto Miranda Medrano1, Giovanni Emmanuel García Romero2.
Abstract
Adaptation of crops to climate change has motivated an increasing interest in the potential value of novel traits from wild species; maize wild relatives, the teosintes, harbor traits that may be useful to maize breeding. To study the ecogeographic distribution of teosinte we constructed a robust database of 2363 teosinte occurrences from published sources for the period 1842-2016. A geographical information system integrating 216 environmental variables was created for Mexico and Central America and was used to characterize the environment of each teosinte occurrence site. The natural geographic distribution of teosinte extends from the Western Sierra Madre of the State of Chihuahua, Mexico to the Pacific coast of Nicaragua and Costa Rica, including practically the entire western part of Mesoamerica. The Mexican annuals Zea mays ssp. parviglumis and Zea mays ssp. mexicana show a wide distribution in Mexico, while Zea diploperennis, Zea luxurians, Zea perennis, Zea mays ssp. huehuetenangensis, Zea vespertilio and Zea nicaraguensis had more restricted and distinct ranges, representing less than 20% of the total occurrences. Only 11.2% of teosinte populations are found in Protected Natural Areas in Mexico and Central America. Ecogeographical analysis showed that teosinte can cope with extreme levels of precipitation and temperatures during growing season. Modelling teosinte geographic distribution demonstrated congruence between actual and potential distributions; however, some areas with no occurrences appear to be within the range of adaptation of teosintes. Field surveys should be prioritized to such regions to accelerate the discovery of unknown populations. Potential areas for teosintes Zea mays ssp. mexicana races Chalco, Nobogame, and Durango, Zea mays ssp. huehuetenangensis, Zea luxurians, Zea diploperennis and Zea nicaraguensis are geographically separated; however, partial overlapping occurs between Zea mays ssp. parviglumis and Zea perennis, between Zea mays ssp. parviglumis and Zea diploperennis, and between Zea mays ssp. mexicana race Chalco and Zea mays ssp. mexicana race Central Plateau. Assessing priority of collecting for conservation showed that permanent monitoring programs and in-situ conservation projects with participation of local farmer communities are critically needed; Zea mays ssp. mexicana (races Durango and Nobogame), Zea luxurians, Zea diploperennis, Zea perennis and Zea vespertilio should be considered as the highest priority taxa.Entities:
Mesh:
Year: 2018 PMID: 29451888 PMCID: PMC5815594 DOI: 10.1371/journal.pone.0192676
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Environmental variables considered in the study.
| Variable | Total | |||
|---|---|---|---|---|
| Monthly | Seasonal | Annual | ||
| Longitude (degrees) | 1 | |||
| Latitude (degrees) | 1 | |||
| Altitude (m) | 1 | |||
| Minimum temperature (°C) | 12 | 3 | 1 | 16 |
| Maximum temperature (°C) | 12 | 3 | 1 | 16 |
| Mean temperature (°C) | 12 | 2 | 14 | |
| Thermal range (°C) | 12 | 3 | 15 | |
| Thermal sum (°C) | 12 | 2 | 1 | 15 |
| Growing season length (GS) (days) | 1 | 1 | ||
| GS initiation (Julian day) | 1 | 1 | ||
| GS finalization (Julian day) | 1 | 1 | ||
| Accumulated growing-degree days (GDD) | 12 | 2 | 1 | 15 |
| Photoperiod (h) | 12 | 2 | 1 | 15 |
| Precipitation (mm) | 12 | 4 | 2 | 18 |
| Potential evapotranspiration (ETP; mm) | 12 | 2 | 1 | 15 |
| Moisture index | 12 | 4 | 3 | 19 |
| Humid months (P≥ETP) | 1 | 2 | 3 | |
| Solar radiation | 12 | 2 | 1 | 15 |
| Relative humidity | 12 | 2 | 1 | 15 |
| Bioclimatic variables | 4 | 8 | 7 | 19 |
| Total | 148 | 43 | 22 | 216 |
Number of reports for teosinte occurrences in Mexico and Central America.
| Taxon | Region | Herbarium | Seed | Document | Archaeology | TOTAL |
|---|---|---|---|---|---|---|
| Chalco | 135 | 231 | 41 | 2 | ||
| Durango | 22 | 19 | 2 | |||
| Central Plateau | 73 | 190 | 22 | |||
| Nobogame | 6 | 25 | 4 | |||
| Balsas | 178 | 680 | 256 | |||
| Huehuetenango | 15 | 50 | ||||
| Guatemala | 37 | 57 | ||||
| Oaxaca | 3 | 3 | 8 | |||
| El Salvador | 1 | |||||
| Brazil | 5 | |||||
| Nicaragua | 10 | 14 | ||||
| Jalisco | 126 | 24 | ||||
| Nayarit | 1 | 13 | ||||
| Jalisco | 78 | 15 | ||||
| Michoacan | 4 | |||||
| Costa Rica | 1 | |||||
| Unclassified | 5 | 2 | 5 | |||
Fig 1Occurrence records for teosinte species compiled from field observations and collection specimens.
Fig 2Natural distribution and dispersion areas of teosinte in the world.
Eigenvectors of 23 climatic variables from principal component analysis of teosinte locations.
| Variable | PC1 | PC2 | PC3 |
|---|---|---|---|
| X3 -altitude (m) | -0.2445 | -0.0179 | -0.0736 |
| X30-annual mean maximum temperature (°C) | 0.2487 | -0.0508 | -0.0914 |
| X44-annual mean minimum temperature (°C) | 0.2466 | 0.0702 | -0.0136 |
| X58-annual mean temperature | 0.2527 | 0.0145 | -0.0506 |
| X156-annual mean relative humidity (%) | -0.0048 | 0.4291 | -0.1555 |
| X162-mean solar radiation in May | -0.0126 | -0.4142 | 0.2562 |
| X170-annual mean solar radiation | 0.0516 | -0.4063 | 0.1580 |
| X175-GS mean maximum temperature (°C) | 0.2422 | -0.0751 | -0.0798 |
| X176-GS maximum temperature (°C) | 0.2333 | -0.0859 | -0.0641 |
| X177-monthly maximum temperature (°C) | 0.2389 | -0.1066 | -0.1033 |
| X178-GS mean minimum temperature (°C) | 0.2516 | -0.0086 | -0.0122 |
| X179-GSn minimum temperature (°C) | 0.2451 | -0.0204 | -0.1057 |
| X180-monthly minimum temperature (°C) | 0.2330 | 0.1146 | -0.0040 |
| X181-GS mean temperature (°C) | 0.2503 | -0.0407 | -0.0448 |
| X182-growing cumulative growing-degree days | 0.2330 | 0.1145 | 0.1662 |
| X187-total growing season precipitation (mm) | 0.1376 | 0.1791 | 0.7054 |
| X201-growing season length (days) | 0.1027 | 0.3278 | 0.4910 |
| X208-mean temperature of wettest quarter (°C) | 0.2430 | -0.0076 | -0.0430 |
| X209-mean temperature of driest quarter (°C) | 0.2454 | 0.0527 | -0.1103 |
| X210-mean temperature of warmest quarter (°C) | 0.2400 | -0.0096 | -0.1165 |
| X211-mean temperature of coldest quarter (°C) | 0.2445 | 0.0644 | -0.0577 |
| X212-Precipitation seasonality (%) | 0.1401 | -0.2966 | 0.0350 |
| X218- relative humidity of the driest month (%) | -0.0199 | 0.4288 | -0.1894 |
| Eigenvalues proportions | 67.40% | 21.70% | 4.50% |
Fig 3Principal component analysis of collecting sites of teosinte using ecogeographic data (Zea mays ssp. parviglumis designated with a blue square; Zea mays ssp. mexicana race Chalco designated with a red circle, race Durango designated with an orange circle, race Central Plateau designated with a lawngreen triangle, race Nobogame designated with a pink circle; Zea mays ssp. huehuetenangensis designated with a cyan square; Zea perennis designated with a purple star; Zea diploperennis designated with a magenta star; Zea luxurians designated with a darkgreen diamond; Zea nicaraguensis designated with a gray diamond; Zea luxurians from San Felipe Usila, Oaxaca designated with a brown diamond; Zea vespertilio designated with a yellow diamond).
Range of ecological descriptors (environmental intervals) for 14 teosinte taxa.
| Taxon | Region | Growing season | Annual | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Altitude | Length | Mean temperature | Rainfall | Minimum temperature | Maximum temperature | Mean temperature | Rainfall | ||
| (m) | (days) | (°C) | (mm) | (°C) | (°C) | (°C) | (mm) | ||
| Chalco | 1700–2990 | 119–303 | 13.0–21.3 | 312–1148 | 4.5–14.5 | 19.1–29.0 | 12.3–20.5 | 451–1321 | |
| Durango | 1860–1950 | 83–93 | 19.8–20.4 | 305–339 | 12.2–12.7 | 27.3–28.1 | 16.7–17.4 | 468–512 | |
| Central Plateau | 1500–2208 | 114–153 | 17.4–22.3 | 305–860 | 8.3–14.8 | 26.2–33.3 | 16.2–20.4 | 458–988 | |
| Nobogame | 1850–2020 | 97–123 | 17.7–22.8 | 443–800 | 6.1–13.7 | 26–31.4 | 13.9–17.2 | 670–1088 | |
| Balsas | 143–1960 | 130–185 | 17.8–28.4 | 557–1475 | 10.4–21.3 | 24.9–37.8 | 17.1–28.3 | 698–1521 | |
| Huehuetenango | 860–2500 | 194–243 | 15.5–23.9 | 1115–1431 | 6.9–15.0 | 23.3–32.7 | 15.3–23.2 | 1193–1600 | |
| Guatemala | 4–1200 | 148–216 | 23.0–28.4 | 824–2744 | 16.6–22.1 | 30.3–35.4 | 22.5–28.2 | 886–2864 | |
| Oaxaca | 40–250 | 292–303 | 21.0–25.4 | 3503–3669 | 13.2–16.3 | 27.9–33.0 | 21.2–25.6 | 3629–3805 | |
| Niacaragua | 9–15 | 205–207 | 27.7–27.8 | 1535–1622 | 20.6–20.9 | 35.5–35.5 | 27.7–27.8 | 1576–1667 | |
| Jalisco | 1350–2300 | 147–160 | 16.4–24.1 | 905–1229 | 10.0–16.4 | 23.9–32.6 | 15.6–22.7 | 1024–1364 | |
| Nayarit | 1390–1410 | 148–149 | 20.5–21.6 | 1270–1289 | 12.7–13.7 | 29.0–30.2 | 18.6–19.6 | 1412–1433 | |
| Jalisco | 1500–2174 | 146–148 | 18.6–21.4 | 740–771 | 11.0–13.3 | 26.6–29.6 | 17.4–19.9 | 846–891 | |
| Michoacán | 1380–1385 | 158–159 | 21.2–21.5 | 1049–1087 | 12.7–13.0 | 29.4–29.7 | 20.2–20.4 | 1186–1224 | |
| Costa Rica | 3 | 219 | 27.3 | 1632 | 22.6 | 33.1 | 27.8 | 1620 | |
Fig 4Actual and potential distribution of teosinte.
Summary statistics of the models for teosinte taxa.
AUC for: (a) training data and (b) testing data; method selected for thresholding; Logistic threshold to obtain the binary map (suitable and unsuitable areas for teosinte distribution), and omission rate of the models.
| Taxon | Area Under the Curve | Method of thresholding | Logistic threshold | Omission rate | |
|---|---|---|---|---|---|
| Training | Testing | ||||
| 0.982 | 0.976 | ETSS | 0.144 | 0.011 | |
| 0.993 | 0.992 | FC10 | 0.275 | 0.055 | |
| 0.993 | 0.992 | 10PTP | 0.271 | 0.072 | |
| 0.998 | 0.998 | 10PTP | 0.609 | 0.000 | |
| 0.998 | 0.998 | 10PTP | 0.332 | 0.025 | |
| 0.998 | 0.998 | 10PTP | 0.416 | 0.047 | |
| 0.996 | 0.990 | EETOD | 0.221 | 0.058 | |
| 0.998 | 0.998 | MTP | 0.539 | 0.014 | |
| 0.998 | 0.997 | MTP | 0.240 | 0.019 | |
| 0.997 | 0.996 | 10PTP | 0.525 | 0.086 | |
ETSS = Equal training sensitivity and specificity; FC10 = Fixed cumulative value 10; 10PTP = 10 percentile training presence; EETOD = Equal entropy of thresholded and original distributions; MTP = Minimum training presence.
Fig 5Potential distribution of teosinte taxa.
Fig 6Actual and potential distribution of teosinte and geographical location of PNAs.
Assessment of priority for collecting for conservation in gene banks.
| Taxon | TOT | BA | POT | SGC | GCS | SRC | RTS | ExS | AVS |
|---|---|---|---|---|---|---|---|---|---|
| 409 | 231 | 25964 | 7257 | 2.8 | 5.6 | 2.7 | 5 | 4.0 | |
| 43 | 19 | 4479 | 597 | 1.3 | 4.4 | 0 | 1 | ||
| 285 | 190 | 21954 | 5969 | 2.7 | 6.7 | 0 | 5 | 3.6 | |
| 35 | 25 | 5127 | 785 | 1.5 | 7.1 | 0 | 1 | ||
| 1114 | 680 | 89789 | 21363 | 2.4 | 6.1 | 0.7 | 5 | 3.5 | |
| 65 | 50 | 1559 | 1571 | 10.1 | 7.7 | 0 | 1 | 4.7 | |
| 94 | 60 | 28773 | 1885 | 0.7 | 6.4 | 1.7 | 1 | ||
| 24 | 14 | 524 | 440 | 8.4 | 5.8 | 10 | 1 | 6.3 | |
| 150 | 37 | 5088 | 1162 | 2.3 | 2.5 | 0 | 1 | ||
| 93 | 19 | 3732 | 597 | 1.6 | 2 | 0 | 1 | ||
| 1 | 0 | 1 | 0 | 0 | 0 | 10 | 1 |
1TOT = Total records,
2BA = Bank accessions,
3POT = Potential area km2,
4SGC = Seed geographic coverage (area of 10 km radius per seed accession);
5GCS = Geographic coverage score (seed geographic coverage/potential area)*10,
6SRC = Sampling representativeness score (number of seed accessions/all taxon records)*10,
7RTS = Rarity taxa score (records in rare environments(5 and 95 percentiles)/total records of taxon)*10,
8ExS = Experts score (where 1 corresponds to a very high priority, and 10 corresponds to the lowest priority),
9AVS = Average score.