Literature DB >> 29437998

Preparation of Cellular Extracts from Xenopus Eggs and Embryos.

Matthew C Good1, Rebecca Heald2.   

Abstract

Cell-free cytoplasmic extracts prepared from Xenopus eggs have been used extensively to recapitulate and characterize intracellular events in vitro. Egg extracts can be induced to transit the cell cycle and reconstitute assembly of dynamic structures including the interphase nucleus and the mitotic spindle. In this protocol, methods are described for preparing crude cytoplasmic extracts from Xenopus eggs and embryos that are arrested in metaphase of the cell cycle. The basic protocol uses unfertilized Xenopus laevis eggs, which are crushed by centrifugation in the presence of EGTA to preserve the natural cytostatic factor (CSF) activity that maintains high levels of Cdk1/cyclin B kinase and metaphase arrest. In the second method, the basic procedure is adapted for Xenopus tropicalis eggs with minor modifications to accommodate differences in frog size, timing of egg laying, and temperature and salt sensitivity. The third variation takes advantage of the synchronous divisions of fertilized X. laevis eggs to generate extracts from embryos, which are arrested in metaphase by the addition of nondegradable cyclin B and an inhibitor of the anaphase-promoting complex (APC) that together stabilize Cdk1/cyclin B kinase activity. Because they are obtained in much smaller amounts and their cell cycles are less perfectly synchronized, extracts prepared from embryos are less robust than egg extracts. X. laevis egg extracts have been used to study a wide range of cellular processes. In contrast, X. tropicalis egg extracts and X. laevis embryo extracts have been used primarily to characterize molecular mechanisms regulating spindle and nuclear size.
© 2018 Cold Spring Harbor Laboratory Press.

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Year:  2018        PMID: 29437998      PMCID: PMC7337318          DOI: 10.1101/pdb.prot097055

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  15 in total

1.  Cell cycle extracts.

Authors:  A W Murray
Journal:  Methods Cell Biol       Date:  1991       Impact factor: 1.441

2.  Isolation and Demembranation of Xenopus Sperm Nuclei.

Authors:  James W Hazel; Jesse C Gatlin
Journal:  Cold Spring Harb Protoc       Date:  2018-06-01

3.  Formation in vitro of sperm pronuclei and mitotic chromosomes induced by amphibian ooplasmic components.

Authors:  M J Lohka; Y Masui
Journal:  Science       Date:  1983-05-13       Impact factor: 47.728

4.  Dominant-negative cyclin-selective ubiquitin carrier protein E2-C/UbcH10 blocks cells in metaphase.

Authors:  F M Townsley; A Aristarkhov; S Beck; A Hershko; J V Ruderman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

5.  Cyclin is degraded by the ubiquitin pathway.

Authors:  M Glotzer; A W Murray; M W Kirschner
Journal:  Nature       Date:  1991-01-10       Impact factor: 49.962

6.  Encapsulation of Xenopus Egg and Embryo Extract Spindle Assembly Reactions in Synthetic Cell-Like Compartments with Tunable Size.

Authors:  Matthew C Good
Journal:  Methods Mol Biol       Date:  2016

7.  Cytoplasmic volume modulates spindle size during embryogenesis.

Authors:  Matthew C Good; Michael D Vahey; Arunan Skandarajah; Daniel A Fletcher; Rebecca Heald
Journal:  Science       Date:  2013-11-15       Impact factor: 47.728

8.  Xenopus tropicalis egg extracts provide insight into scaling of the mitotic spindle.

Authors:  Katherine S Brown; Michael D Blower; Thomas J Maresca; Timothy C Grammer; Richard M Harland; Rebecca Heald
Journal:  J Cell Biol       Date:  2007-03-05       Impact factor: 10.539

9.  Mitotic spindle scaling during Xenopus development by kif2a and importin α.

Authors:  Jeremy D Wilbur; Rebecca Heald
Journal:  Elife       Date:  2013-02-19       Impact factor: 8.140

10.  Induction of nuclear envelope breakdown, chromosome condensation, and spindle formation in cell-free extracts.

Authors:  M J Lohka; J L Maller
Journal:  J Cell Biol       Date:  1985-08       Impact factor: 10.539

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  12 in total

1.  The Perinuclear ER Scales Nuclear Size Independently of Cell Size in Early Embryos.

Authors:  Richik Nilay Mukherjee; Jérémy Sallé; Serge Dmitrieff; Katherine M Nelson; John Oakey; Nicolas Minc; Daniel L Levy
Journal:  Dev Cell       Date:  2020-05-29       Impact factor: 12.270

2.  Dissecting Protein Complexes in Branching Microtubule Nucleation Using Meiotic Xenopus Egg Extracts.

Authors:  Jae-Geun Song; Sabine Petry
Journal:  Cold Spring Harb Protoc       Date:  2018-09-04

3.  Nuclear F-actin and Lamin A antagonistically modulate nuclear shape.

Authors:  Sampada Mishra; Daniel L Levy
Journal:  J Cell Sci       Date:  2022-07-04       Impact factor: 5.235

4.  Visualizing Nuclear Pore Complexes in Xenopus Egg Extracts.

Authors:  Sampada Mishra; Daniel L Levy
Journal:  Methods Mol Biol       Date:  2022

5.  Chromatin Characterization in Xenopus laevis Cell-Free Egg Extracts and Embryos.

Authors:  Wei-Lin Wang; Takashi Onikubo; David Shechter
Journal:  Cold Spring Harb Protoc       Date:  2019-02-01

6.  Chemical Screening Using Cell-Free Xenopus Egg Extract.

Authors:  Matthew R Broadus; Ethan Lee
Journal:  Cold Spring Harb Protoc       Date:  2018-08-01

7.  Xenopus laevis Egg Extract Preparation and Live Imaging Methods for Visualizing Dynamic Cytoplasmic Organization.

Authors:  Xianrui Cheng; James E Ferrell
Journal:  J Vis Exp       Date:  2021-06-06       Impact factor: 1.355

8.  Nucleoplasmin is a limiting component in the scaling of nuclear size with cytoplasmic volume.

Authors:  Pan Chen; Miroslav Tomschik; Katherine M Nelson; John Oakey; Jesse C Gatlin; Daniel L Levy
Journal:  J Cell Biol       Date:  2019-10-21       Impact factor: 10.539

9.  Protein Immunodepletion and Complementation in Xenopus laevis Egg Extracts.

Authors:  Christopher Jenness; David J Wynne; Hironori Funabiki
Journal:  Cold Spring Harb Protoc       Date:  2018-09-04

10.  Microtubule-dependent pushing forces contribute to long-distance aster movement and centration in Xenopus laevis egg extracts.

Authors:  Taylor Sulerud; Abdullah Bashar Sami; Guihe Li; April Kloxin; John Oakey; Jesse Gatlin
Journal:  Mol Biol Cell       Date:  2020-10-07       Impact factor: 4.138

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