Literature DB >> 29424099

Analysis of SLCO1B1 and APOE genetic polymorphisms in a large ethnic Hakka population in southern China.

Zhixiong Zhong1,2, Heming Wu2,3, Bin Li1,2, Cunren Li1,2, Zhidong Liu1,2, Min Yang1,2, Qifeng Zhang1,2, Wei Zhong1,2, Pingsen Zhao2,3.   

Abstract

OBJECTIVE: Statins are the most widely used lipid-lowering drugs, which have a significant effect on the inhibition of cardiovascular disease. The efficacy and side effects of statins are associated with the polymorphisms of SLCO1B1 and APOE genes. The purpose of this study was to analyze the SLCO1B1 and APOE gene polymorphisms in the Hakka population of southern China.
METHODS: A total of 3249 subjects including 2019 males and 1230 females participated in this study. Polymerase chain reaction (PCR)-fluorescence probe technique for polymorphisms analysis and analyzed the genotypes frequencies of SLCO1B1 and APOE genes.
RESULTS: The frequencies of SLCO1B1 521T>C between men and women were statistically significant (SLCO1B1 521TT, χ2  = 8.431, P = .004; SLCO1B1 521TC, χ2  = 7.436, P = .007). The frequencies of haplotypes *1b/*1b (40.07%) and *1a/*1b (32.56%) of SLCO1B1 gene accounted for 72.63%, followed by *1b/*15(14.40%), *1a/*1a (5.82%), *1a/*15 (5.57%), *15/*15 (1.45%), and *1a/*5 (0.12%). The frequencies of haplotypes *1a/*15 and *1b/*1b of SLCO1B1 gene between men and women were statistically significant (*1a/*15, χ2  = 6.789, P = .009; *1b/*1b, χ2  = 3.998, P = .004). In this study, genotype ɛ3/ɛ3 accounted for 69.04%, followed by ɛ3/ɛ4 (16.19%), ɛ2/ɛ3 (11.60%), ɛ2/ɛ4 (1.35%), ɛ4/ɛ4 (1.08%), and ɛ2/ɛ2 (0.74%) in all subjects, in which ɛ3 had the greatest allele frequency (82.93%), followed by ɛ4 (9.85%) and ɛ2 (7.22%). We found that 47 subjects carrying the SLCO1B1 521 (CC) polymorphism who had not any myopathy caused by statins.
CONCLUSIONS: We analyzed the SLCO1B1 and APOE gene polymorphisms in the Hakka population of southern China. This study provides a reference for the individualized meditation for Hakka population in this area.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  zzm321990APOEzzm321990; Hakka population; SLCO1B1; genetic polymorphism; statin

Year:  2018        PMID: 29424099      PMCID: PMC6817202          DOI: 10.1002/jcla.22408

Source DB:  PubMed          Journal:  J Clin Lab Anal        ISSN: 0887-8013            Impact factor:   2.352


  48 in total

Review 1.  Quantifying effect of statins on low density lipoprotein cholesterol, ischaemic heart disease, and stroke: systematic review and meta-analysis.

Authors:  M R Law; N J Wald; A R Rudnicka
Journal:  BMJ       Date:  2003-06-28

2.  Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis.

Authors:  Valentin Dinu; Hongyu Zhao; Perry L Miller
Journal:  J Biomed Inform       Date:  2007-06-10       Impact factor: 6.317

Review 3.  The impact of next-generation sequencing technology on genetics.

Authors:  Elaine R Mardis
Journal:  Trends Genet       Date:  2008-02-11       Impact factor: 11.639

Review 4.  Review: Apolipoprotein E (Apo E) gene polymorphism and coronary heart disease in Asian populations.

Authors:  Farzana Abubakar Yousuf; Mohammad Perwaiz Iqbal
Journal:  Pak J Pharm Sci       Date:  2015-07       Impact factor: 0.684

5.  SLCO1B1 polymorphism markedly affects the pharmacokinetics of lovastatin acid.

Authors:  Aleksi Tornio; Juha Vakkilainen; Mikko Neuvonen; Janne T Backman; Pertti J Neuvonen; Mikko Niemi
Journal:  Pharmacogenet Genomics       Date:  2015-08       Impact factor: 2.089

6.  Functional characterization of SLCO1B1 (OATP-C) variants, SLCO1B1*5, SLCO1B1*15 and SLCO1B1*15+C1007G, by using transient expression systems of HeLa and HEK293 cells.

Authors:  Yoshio Kameyama; Keiko Yamashita; Kaoru Kobayashi; Masakiyo Hosokawa; Kan Chiba
Journal:  Pharmacogenet Genomics       Date:  2005-07       Impact factor: 2.089

7.  SLCO1B1 521T-->C functional genetic polymorphism and lipid-lowering efficacy of multiple-dose pravastatin in Chinese coronary heart disease patients.

Authors:  Wei Zhang; Bi-Lian Chen; Vural Ozdemir; Yi-Jing He; Gan Zhou; Dao-Di Peng; Sheng Deng; Qi-Ying Xie; Wei Xie; Lin-Yong Xu; Lian-Ci Wang; Lan Fan; An Wang; Hong-Hao Zhou
Journal:  Br J Clin Pharmacol       Date:  2007-04-18       Impact factor: 4.335

8.  Apolipoprotein E polymorphism in a Danish population compared to findings in 45 other study populations around the world.

Authors:  L U Gerdes; I C Klausen; I Sihm; O Faergeman
Journal:  Genet Epidemiol       Date:  1992       Impact factor: 2.135

9.  APOE, ACT and CHRNA7 genes in the conversion from amnestic mild cognitive impairment to Alzheimer's disease.

Authors:  A Barabash; A Marcos; I Ancín; B Vázquez-Alvarez; C de Ugarte; P Gil; C Fernández; M Encinas; J J López-Ibor; J A Cabranes
Journal:  Neurobiol Aging       Date:  2007-12-19       Impact factor: 4.673

Review 10.  Apolipoprotein E: an important gene and protein to follow in laboratory medicine.

Authors:  G Siest; T Pillot; A Régis-Bailly; B Leininger-Muller; J Steinmetz; M M Galteau; S Visvikis
Journal:  Clin Chem       Date:  1995-08       Impact factor: 8.327

View more
  4 in total

1.  Analysis of SLCO1B1 and APOE genetic polymorphisms in a large ethnic Hakka population in southern China.

Authors:  Zhixiong Zhong; Heming Wu; Bin Li; Cunren Li; Zhidong Liu; Min Yang; Qifeng Zhang; Wei Zhong; Pingsen Zhao
Journal:  J Clin Lab Anal       Date:  2018-02-09       Impact factor: 2.352

2.  The relationship between ApoE gene polymorphism and the efficacy of statins controlling hyperlipidemia.

Authors:  Cong Cai; Zhongzheng Wen; Linrui Li
Journal:  Am J Transl Res       Date:  2021-06-15       Impact factor: 4.060

3.  Robust Performance of Potentially Functional SNPs in Machine Learning Models for the Prediction of Atorvastatin-Induced Myalgia.

Authors:  Brandon N S Ooi; Ariel F Ying; Yong Zher Koh; Yu Jin; Sherman W L Yee; Justin H S Lee; Samuel S Chong; Jack W C Tan; Jianjun Liu; Caroline G Lee; Chester L Drum
Journal:  Front Pharmacol       Date:  2021-04-22       Impact factor: 5.810

4.  APOE gene ɛ4 allele (388C-526C) effects on serum lipids and risk of coronary artery disease in southern Chinese Hakka population.

Authors:  Qinghua Liu; Heming Wu; Zhikang Yu; Qingyan Huang; Zhixiong Zhong
Journal:  J Clin Lab Anal       Date:  2021-07-27       Impact factor: 2.352

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.