| Literature DB >> 29405575 |
Saverio Caini1, Clotilde El-Guerche Séblain2, Meral A Ciblak3, John Paget1.
Abstract
BACKGROUND: There is a limited knowledge regarding the epidemiology of influenza in Middle East and North Africa.Entities:
Keywords: Middle East; North Africa; influenza type A; influenza type B; timing of epidemics
Mesh:
Year: 2018 PMID: 29405575 PMCID: PMC5907816 DOI: 10.1111/irv.12544
Source DB: PubMed Journal: Influenza Other Respir Viruses ISSN: 1750-2640 Impact factor: 4.380
Figure 1Countries included in the analysis (in red) and countries that were not included because of lack of data (in grey). Countries were marked using the two‐letter ISO codes. AF, Afghanistan; AM, Armenia; BH, Bahrain; DZ, Algeria; EG, Egypt; GE, Georgia; IL, Israel; IQ, Iraq; IR, Iran; JO, Jordan; LB, Lebanon; MA, Morocco; OM, Oman; PK, Pakistan; QA, Qatar; TN, Tunisia; TR, Turkey
Laboratory‐confirmed influenza samples reported in each country by virus type, subtype and lineage. The WHO FluNet database, 2010‐2016
| Country | Population (million) | Latitude | Longitude | No. of seasons | Influenza (any type) | A(H3N2) | A(H1N1)pdm2009 | A other/not subtyped | B Victoria | B Yamagata | B not characterized | Median % A (min, max) | Median % B (min, max) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Afghanistan | 33.3 | 33° N | 65° E | 1 | 74 | 13 | 6 | 49 | 0 | 0 | 6 | 91.9 (‐) | 8.1 (‐) |
| Algeria | 40.3 | 28° N | 3° E | 6 | 1832 | 503 | 709 | 2 | 16 | 24 | 578 | 82.5 (45.0‐99.5) | 17.5 (0.5‐55.0) |
| Armenia | 3.1 | 40° N | 45° E | 1 | 632 | 0 | 627 | 5 | 0 | 0 | 0 | 100.0 (‐) | 0.0 (‐) |
| Bahrain | 1.4 | 26° N | 50° E | 4 | 1022 | 86 | 694 | 74 | 17 | 59 | 92 | 76.3 (71.4‐88.8) | 23.7 (11.2‐28.6) |
| Egypt | 94.7 | 27° N | 30° E | 6 | 9997 | 2046 | 5297 | 449 | 10 | 11 | 2184 | 73.8 (62.0‐96.4) | 26.2 (3.6‐38.0) |
| Georgia | 4.9 | 42° N | 43° E | 6 | 1894 | 305 | 932 | 15 | 13 | 0 | 629 | 80.6 (14.9‐96.1) | 19.4 (3.9‐85.1) |
| Iran | 82.8 | 32° N | 53° E | 6 | 8315 | 1893 | 4184 | 4 | 0 | 0 | 2234 | 67.5 (44.0‐90.5) | 32.5 (9.5‐56.0) |
| Iraq | 38.1 | 33° N | 44° E | 4 | 1672 | 36 | 1190 | 371 | 0 | 0 | 75 | 98.2 (77.1‐100.0) | 1.8 (0.0‐22.9) |
| Israel | 8.2 | 31° N | 34° E | 6 | 7081 | 1168 | 2213 | 1793 | 0 | 0 | 1907 | 72.7 (53.6‐93.2) | 27.3 (6.8‐46.4) |
| Jordan | 8.2 | 31° N | 36° E | 6 | 1685 | 382 | 929 | 4 | 97 | 61 | 212 | 86.3 (38.5‐99.1) | 13.7 (0.9‐61.5) |
| Lebanon | 6.2 | 33° N | 35° E | 2 | 302 | 38 | 76 | 0 | 0 | 0 | 188 | 35.4 (21.6‐49.2) | 64.6 (50.8‐78.4) |
| Morocco | 33.7 | 32° N | 5° W | 5 | 1178 | 370 | 412 | 2 | 28 | 34 | 332 | 60.4 (32.7‐94.8) | 39.6 (5.2‐67.3) |
| Oman | 3.4 | 21° N | 57° E | 6 | 5021 | 949 | 2186 | 477 | 0 | 76 | 1333 | 73.4 (60.2‐90.1) | 26.6 (9.9‐39.8) |
| Pakistan | 202.0 | 30° N | 70° E | 6 | 2273 | 369 | 964 | 466 | 66 | 73 | 335 | 77.6 (50.9‐89.9) | 22.4 (10.1‐49.1) |
| Qatar | 2.3 | 25° N | 51° E | 6 | 11 581 | 84 | 5220 | 3815 | 0 | 1 | 2461 | 77.7 (65.4‐86.8) | 22.3 (13.2‐34.6) |
| Tunisia | 11.1 | 34° N | 9° E | 6 | 1462 | 381 | 706 | 1 | 0 | 77 | 297 | 80.4 (56.0‐95.9) | 19.6 (4.1‐44.0) |
| Turkey | 80.3 | 39° N | 35° E | 6 | 14 511 | 4225 | 6792 | 40 | 89 | 2 | 3363 | 76.0 (49.2‐97.2) | 24.0 (2.8‐50.8) |
| Total | 654.0 | 21° N ‐ 42° N | 5° W ‐ 70° E | 83 | 70 532 | 12 848 | 33 137 | 7567 | 336 | 418 | 16 226 | 76.5 (14.9‐100.0) | 23.5 (0.0‐85.1) |
Latitude and longitude of the country centroid (if available) or largest city.
A season was defined as the period between 1 July of one year and 30 June of next year. Only seasons with 50 or more reported influenza cases and 20 or more weeks of data reporting were included. See text for more details.
Timing and amplitude of the primary and secondary peaks of seasonal influenza epidemics (only countries with four or more seasons of data were included). The WHO FluNet database, 2010‐2016
| Country | Latitude | Longitude | Primary peak | Secondary peak | ||
|---|---|---|---|---|---|---|
| Timing (Month) | Amplitude | Timing (Month) | Amplitude | |||
| Algeria | 28° N | 3° E | Feb | 109.7% | Jul | 15.6% |
| Bahrain | 26° N | 50° E | Nov | 123.6% | Mar | 83.3% |
| Egypt | 27° N | 30° E | Jan | 102.1% | May | 27.0% |
| Georgia | 42° N | 43° E | Feb | 109.9% | Oct | 27.7% |
| Iran | 32° N | 53° E | Jan | 112.0% | May | 26.8% |
| Iraq | 33° N | 44° E | Feb | 115.3% | Jun | 26.8% |
| Israel | 31° N | 34° E | Feb | 105.1% | Oct | 12.3% |
| Jordan | 31° N | 36° E | Jan | 113.0% | Apr | 105.1% |
| Morocco | 32° N | 5° W | Jan | 104.0% | Sep | 12.1% |
| Oman | 21° N | 57° E | Apr | 83.0% | Jan | 82.4% |
| Pakistan | 30° N | 70° E | Feb | 103.5% | Oct | 25.5% |
| Qatar | 25° N | 51° E | Dec | 106.5% | Mar | 76.0% |
| Tunisia | 34° N | 9° E | Mar | 108.6% | Nov | 18.2% |
| Turkey | 39° N | 35° E | Feb | 112.7% | Sep | 22.7% |
Latitude and longitude of the country centroid (if available) or largest city.
Figure 2Typical timing of the primary and secondary peaks of influenza detection (as calculated using the periodic annual function; see text for details) by site, against their longitudinal and latitudinal positions
Comparison of the spatial timing of influenza epidemics in Middle East and North Africa and in Europe and Central Asia in six consecutive influenza seasons (from 2010‐2011 to 2015‐2016). The WHO FluNet database, 2010‐2016
| Season | Longitudinal gradient | Latitudinal gradient | ||||||
|---|---|---|---|---|---|---|---|---|
| Middle East and North Africa |
| Europe and Central Asia |
| Middle East and North Africa |
| Europe and Central Asia |
| |
| 2010‐2011 | ‐ | .407 | West to east | .008 | ‐ | .241 | ‐ | .576 |
| 2011‐2012 | ‐ | .846 | ‐ | .362 | ‐ | .615 | ‐ | .236 |
| 2012‐2013 | East to west | .035 | ‐ | .443 | South to north | .027 | ‐ | .111 |
| 2013‐2014 | ‐ | .486 | West to east | .089 | ‐ | .121 | South to north | .048 |
| 2014‐2015 | West to east | .061 | ‐ | .399 | ‐ | .909 | ‐ | .567 |
| 2015‐2016 | East to west | .064 | East to west | .002 | South to north | .092 | ‐ | .716 |
A season was defined as the period between 1 July of one year and 30 June of next year.
This includes all countries in the following influenza transmission zones: south‐west Europe, northern Europe, eastern Europe and Central Asia (see [WHO Influenza Transmission Zones]).