Literature DB >> 29399655

Asymmetric Choreography in Pairs of Orthogonal Rotors.

Antonio Rodríguez-Fortea1, Jiří Kaleta2, Cécile Mézière3, Magali Allain3, Enric Canadell4, Pawel Wzietek5, Josef Michl2,6, Patrick Batail3.   

Abstract

An asymmetric mechanism for correlated motion occurring in noninteracting pairs of adjacent orthogonal 1,4-bis(carboxyethynyl)bicyclo[1.1.1]pentane (BCP) rotators 1 in the solid state is unraveled and shown to play an important role in understanding the dynamics in the crystalline rotor, Bu4N+[1-]·H2O. Single crystal X-ray diffraction and calculation of rotor-rotor interaction energies combined with variable-temperature, variable-field 1H spin-lattice relaxation experiments led to the identification and microscopic rationalization of two distinct relaxation processes.

Entities:  

Year:  2018        PMID: 29399655      PMCID: PMC5793037          DOI: 10.1021/acsomega.7b01580

Source DB:  PubMed          Journal:  ACS Omega        ISSN: 2470-1343


Introduction

A recent investigation of a hybrid system of molecular conductors and molecular rotors based on 1,4-bis(carboxyethynyl)bicyclo[2.2.2]octane (BCO) rotators 2 (Scheme ) identified the phenomenon of quantum dissipation as a possible channel for severely impeding the rotational motion in the metallic state above the metal–insulator transition where the carriers become localized.[1] Extending this nascent class of materials to 1,4-bis(carboxyethynyl)bicyclo[1.1.1]pentane (BCP) rotators[2]1 requires the synthesis (Supporting Information) of Bu4N+[1-]·H2O from its parent biscarboxylic acid for this counter-anion to be engaged as an electrolyte in electrocrystallization experiments with π-conjugated electron donors. Here, we analyze the X-ray structure and dynamics of Bu4N+[1-]·H2O by means of variable-temperature variable-field 1H spin–lattice relaxation experiments coupled to rotor–rotor interaction energy calculations. In the course of this work, we discovered a new mechanism for correlated motion[3−5] in a pair akin to a choreography performed by a duo of ballet dancers who take turns to be similar to the more static solid anchor, supporting an agile, faster-moving, less-constrained partner. We thereby provide a valuable insight[6] into an asymmetric motion of geared molecular units whose axles are orthogonal, that is, offset in a way that makes such an unexpected choreography nonintuitive. For example, once the mechanism of correlated motion in strongly coupled pairs of parallel BCO rotators was deciphered in 3,[4] the proper synchronous gear-like motion, as well as the occasional asynchronous gear-slippage, seemed intuitive enough; likewise for the correlated motion in the pairs of significantly more weakly coupled parallel BCP rotators in 4.[5]
Scheme 1

Results and Discussion

One Single Site: Two Equilibrium Positions

The structure of Bu4N+[1-]·H2O (Figure ) displays two salient features: the occurrence on one single crystallographic site of two equilibrium positions, with unbalanced occupancies of BCP rotators that slightly change from 0.71 and 0.29 at 180 K to 0.83 and 0.17 at 100 K with no evidence for a phase transition in between, and the presence of pairs of fast rotors despite their rather unusual configuration characterized by orthogonal axles. The pairs of rotors are located far apart in the lattice and do not interact directly.
Figure 1

(A) A pair of layers of strings of hydrogen-bonded anions 1 that stack on top of each other along c in Bu4N+[1–]·H2O (Bu4N+ omitted for clarity). Hydrogen-bonded water molecules impose the orthogonal configuration of the two layers within a pair; (B) C–H···H–C (blue dotted lines) and C–H···O (red dotted lines) hydrogen bonds, which determine rotor–rotor and rotor–carboxylate interactions, respectively. Both the majority (0.71) and minority (0.29) occupancy positions (darker and lighter atoms and lines, respectively) of the BCP rotators in dynamic equilibrium in the lattice are represented.

(A) A pair of layers of strings of hydrogen-bonded anions 1 that stack on top of each other along c in Bu4N+[1-]·H2O (Bu4N+ omitted for clarity). Hydrogen-bonded water molecules impose the orthogonal configuration of the two layers within a pair; (B) C–H···H–C (blue dotted lines) and C–H···O (red dotted lines) hydrogen bonds, which determine rotor–rotor and rotor–carboxylate interactions, respectively. Both the majority (0.71) and minority (0.29) occupancy positions (darker and lighter atoms and lines, respectively) of the BCP rotators in dynamic equilibrium in the lattice are represented.

Two Rotational Barriers; Higher Energy Barrier Unexpectedly Assigned to the Motion of Majority Rotors

Two distinct relaxation processes have been identified (Figure ) by variable-temperature 1H spin–lattice relaxation time experiments conducted as described previously on a static crystalline powder at two field strengths.[1,4,5,8] Note that one single relaxation process is typically associated with one single rotor site in the lattice, eventually with several equilibrium positions, for example, as in 5.[8] The occurrence of two 1H spin–lattice relaxation processes in crystalline rotors has been associated with either one of the two cases: when rotors sit at two different crystallographic sites as in BIBCO[7] and [nBu4N+]2[2][2-]2;[1] or as in 3 and 4, and when a pair of rotators, each sitting at a single site with two equilibrium positions with different occupancies, undergo correlated synchronous motion and occasional asynchronous events, where the difference in energy barriers scales with the strength of their interaction. Note in Figure , the perfect fit of T1–1(T) data to the Kubo–Tomita curve for two different rotation barriers, with activation energies Ea1 = 823 K (1.63 kcal mol–1) and Ea2 = 990 K (1.97 kcal mol–1); the attempt correlation times τ1 = 5.6 × 10–13 s and τ2 = 4.4 × 10–13 s, respectively; and an I2/I1 = 2.8 ratio of intensities of the two relaxation peaks. This I2/I1 value matches the ratio (0.71/0.29 = 2.45) of the unbalanced occupancies on the single crystallographic site, providing an unambiguous experimental assignment of the higher and lower energy barriers to the motion of rotators in the majority and minority configurations, respectively. C–H···H–C contacts being shorter in ma–ma pairs (see Figure ), could be taken as supporting such an assignment. However, this experimental evidence is puzzling, because majority–majority (ma–ma) pairs must be more stable than majority–minority (ma–mi) pairs, with mimi pairs being the least stable. Here, on the contrary, the ma–ma pair is associated with shorter C–H···H–C interactions, and its two BCPs contact each other the most so that it should be the least stable (in addition, note that their C–H···O contacts are longer).
Figure 2

Variable-temperature 1H spin–lattice relaxation time, T1–1, at 57 and 209 MHz for a static crystalline sample of Bu4N+[1–]·H2O. The red and blue solid lines represent the fit of the data to the Kubo–Tomita formula, τc = τ0 exp(Ea/kT), yielding Ea1 = 823 K (1.63 kcal mol–1) and Ea2 = 990 K (1.97 kcal mol–1), respectively, and the attempt correlation times of τ1 = 5.6 × 10–13 s and τ2 = 4.4 × 10–13 s, respectively.

Figure 3

Majority−majority (ma−ma), majority−minority (ma−mi), and minority−minority (mi−mi) configurations given by the crystal structure (Figure ).

Variable-temperature 1H spin–lattice relaxation time, T1–1, at 57 and 209 MHz for a static crystalline sample of Bu4N+[1-]·H2O. The red and blue solid lines represent the fit of the data to the Kubo–Tomita formula, τc = τ0 exp(Ea/kT), yielding Ea1 = 823 K (1.63 kcal mol–1) and Ea2 = 990 K (1.97 kcal mol–1), respectively, and the attempt correlation times of τ1 = 5.6 × 10–13 s and τ2 = 4.4 × 10–13 s, respectively. Majority−majority (ma−ma), majority−minority (ma−mi), and minority−minority (mimi) configurations given by the crystal structure (Figure ).

Rotor–Rotor Interaction Energies

To understand the origin of these two barriers and solve this puzzling experimental assignment, we need calculations of rotor–rotor interaction energies. As in previous studies,[1,4,5,8] density functional theory calculations were carried out (Supporting Information) to estimate the rotational barriers searching for the lowest energy paths by means of partial geometry optimizations, starting from the ma–ma and ma–mi configurations given by the crystal structure (Figure ). The terminal groups CCCO2– and CCCO2H were maintained fixed at their crystallographic positions; geometry optimizations were conducted in two ways, as exemplified in Figure . We next analyzed the energy profiles (Figure ) computed for the different rotational motions of the majority and minority rotators in the pairs.
Figure 4

(A) Two protocols for the geometry optimization: Either (i) θ1 is given a set value and the geometry of the three blades of each rotor is optimized or (ii) θ1 and θ2 are given set values to impose a motion of both rotors (see text), and the geometry is optimized. The computed energy profiles for the ma–ma (B) and ma–mi (C) pairs of BCP rotators (see the text for a detailed explanation).

(A) Two protocols for the geometry optimization: Either (i) θ1 is given a set value and the geometry of the three blades of each rotor is optimized or (ii) θ1 and θ2 are given set values to impose a motion of both rotors (see text), and the geometry is optimized. The computed energy profiles for the ma–ma (B) and ma–mi (C) pairs of BCP rotators (see the text for a detailed explanation). When the motion of the atoms of the three blades of each rotator was optimized with only one constraint (either θ1 or θ2 is fixed at different values), the curves denoted ma–ma II, ma–mi II (θ of the ma rotor is the constraint), and ma–mi III (θ of the mi rotor is the constraint) exhibit a very irregular profile. This was unexpected and contrasted sharply with the results of our previous calculations for the pairs of rotators with parallel axles, where the rotational profiles typically exhibit the 60° periodicity expected for an ideal case. Only ma–ma I and ma–mi I, calculated with the constraint θ1 = θ2, show some degree of periodicity. Also, in contrast with the cases of the parallel rotators studied earlier, it was not possible to understand the shape of these profiles by considering only the evolution of the C–H···H–C interactions between rotators, suggesting that they are not the only contributors to rotational barriers when the rotator axles are orthogonal. Instead, interactions between the hydrogen atoms of the rotator blades and the oxygen atoms of the carboxylic groups may become relevant and should also be taken into account. However, even when the evolution of both C–H···H–C and C–H···O distances along the rotational motion associated with hydrogen atoms of the rotators were accounted for, it was not possible to rationalize the calculated profiles. We checked that the C–H···H–C interactions between rotator blades and Bu4N+ are long and similar and that the H2O linker molecules do not make short contacts with the hydrogen atoms of the rotators.

Directionality of the C–H···O Interactions in a Pair Is the Key to the Mechanism of Motion

To make progress, we must return to the crystal structure and consider the differences between the ma–ma, ma–mi, and mimi configurations. Consideration of neither the C–H···H–C nor the C–H···O contacts provides an understanding of the stability order. Taking a closer look at the directionality of the C–H···O interactions in a pair (red-dotted lines in Figure B), we found that the lone pairs of the oxygen atoms are not far from a tetrahedral local geometry so that for a given H···O distance, the interaction will be stronger when C–H points toward one of these lone pairs, that is, when C–H···O and H–O···H angles are as close as possible to 180° and 109°, respectively. With this in mind, we then realized that although in the ma–ma configuration the H···O distance is somewhat longer, its orientation is considerably better (H–O···H = 106.5°; C–H···O = 160.6°) than that in the mimi configuration (H–O···H = 116.9°; C–H···O = 135.7°). We thus conclude that the directionality effect of the C–H···O interaction overrides the effect of the slightly longer H···O distance and stabilizes preferentially the majority configuration. Ultimately, a trade-off between C–H···H–C and C–H···O interactions leads to an unbalanced 71:29 occupancy between the majority and minority configurations in dynamic equilibrium in the lattice. In fact, our calculations led to a very slight 0.1 kcal mol–1 preference for the ma–ma configuration. This value should be taken with a grain of salt because it is a result of competing weak effects, yet it would be consistent, with a slight underestimation of the H···O interaction in our calculation. Taking into account both the distance and orientation of C–H···O interactions as well as C–H···H–C contacts, the detailed structural evolution of the pairs of rotors along the rotational profiles can be understood. With no structural restriction imposed in the calculations, one C–H···O interaction is essentially maintained unchanged (see, for instance, the structural reorganization along the rotational motion for ma–ma II in the Supporting Information Figure S1), whereas the other C–H···O interaction and C–H···H–C interactions evolve during the rotation. In other words, the blades of one rotator barely move whereas those of the other rotate, severely disrupting its own C–H···O interaction. A majority rotor is maintained practically unchanged in the calculated paths for ma–ma II and ma–mi III, but the minority rotor is blocked in ma–mi II. In contrast, neither of the two rotors is blocked along the paths for ma–ma I and ma–mi I. For ma–ma pairs, the two rotational motions are almost identical (1.30–1.35 kcal mol–1). In contrast, for ma–mi pairs, the asymmetric motion is clearly advantageous; when the mi rotor is blocked (ma–mi II), the activation barrier (1.45 kcal mol–1) is not far from the previous ones, but when the ma rotor is blocked (ma–mi III), the barrier is definitely lower (1.08 kcal mol–1).

In a ma–mi Pair, It Is the Minority Rotor That Is Moving Faster

To summarize, we can now understand the mechanism of motion as well as the experimental assignment based on the ratio of intensities of the two T1–1 peaks. For asymmetric motions in a ma–mi pair, it is the minority rotor that is moving faster because its C–H···O interaction is initially weaker on account of its misalignment with the ma oxygen lone pair, that is, its barrier is slightly smaller. In contrast, the barrier for a majority rotor either in ma–ma or ma–mi pairs is slightly larger because its C–H···O interaction is initially somewhat stronger. In addition, when both rotors move in a pair, the barrier for the ma–ma pair is again of the same order as those for asymmetric motions of the ma rotor, whereas for the ma–mi pair, it is larger (1.95 kcal mol–1) by a sizeable margin. This explains why the ratio of intensities of the two T1–1 maxima associated with the experimental barriers is almost identical to the ratio of occupancies of the two rotator equilibrium positions in the crystal structure. In short, the perpendicular orientation of the two rotors in a pair brings about a radically different rotational motion compared with all previously studied BCP- and BCO-based solids with pairs of parallel rotators.
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