Literature DB >> 29392932

Function and Regulation of Phase-Separated Biological Condensates.

Xiao-Han Li1, Pavithra L Chavali1, Rita Pancsa1, Sreenivas Chavali1, M Madan Babu1.   

Abstract

Achieving functional specificity while minimizing cost to fitness is a key constraint during evolution. Formation of biological condensates by liquid-liquid phase separation (LLPS) appears to serve as an important regulatory mechanism to generate moderate specificity in molecular recognition while maintaining a reasonable cost for fitness in terms of design complexity. Formation of biological condensates serves as a unique mechanism of molecular recognition achieving some level of specificity without a huge cost to fitness. Rapid formation of biological condensates in vivo induced by specific cellular or environmental triggers has been shown to be an important mechanism for increasing cellular fitness. Here we discuss the functions and regulation of biological condensates, especially those formed by LLPS, involving interactions between proteins and nucleic acids. These condensates are spatially isolated within the cytosol or nucleus and can facilitate specific biochemical functions under conditions such as stress. The misregulation of biological condensates resulting in nondynamic aggregates has been implicated in a number of diseases. Understanding the functional importance of biological condensates and their regulation opens doors for development of therapies targeting dysfunctional biological condensates, as well as spatiotemporal engineering of functions in cells.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29392932     DOI: 10.1021/acs.biochem.7b01228

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

Review 1.  Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding.

Authors:  Jing Yang; Meng Gao; Junwen Xiong; Zhengding Su; Yongqi Huang
Journal:  Protein Sci       Date:  2019-09-04       Impact factor: 6.725

Review 2.  The molecular language of membraneless organelles.

Authors:  Edward Gomes; James Shorter
Journal:  J Biol Chem       Date:  2018-07-25       Impact factor: 5.157

Review 3.  Physical Chemistry of Cellular Liquid-Phase Separation.

Authors:  Emily P Bentley; Benjamin B Frey; Ashok A Deniz
Journal:  Chemistry       Date:  2019-02-07       Impact factor: 5.236

4.  Comparative roles of charge, π, and hydrophobic interactions in sequence-dependent phase separation of intrinsically disordered proteins.

Authors:  Suman Das; Yi-Hsuan Lin; Robert M Vernon; Julie D Forman-Kay; Hue Sun Chan
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-02       Impact factor: 11.205

5.  Phase transition of RNA-protein complexes into ordered hollow condensates.

Authors:  Ibraheem Alshareedah; Mahdi Muhammad Moosa; Muralikrishna Raju; Davit A Potoyan; Priya R Banerjee
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-22       Impact factor: 11.205

6.  Membraneless Compartmentalization Facilitates Enzymatic Cascade Reactions and Reduces Substrate Inhibition.

Authors:  Taisuke Kojima; Shuichi Takayama
Journal:  ACS Appl Mater Interfaces       Date:  2018-09-14       Impact factor: 9.229

Review 7.  Stress-induced mRNP granules: Form and function of processing bodies and stress granules.

Authors:  Anna R Guzikowski; Yang S Chen; Brian M Zid
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-02-21       Impact factor: 9.957

8.  Programmable and Chemically Fueled DNA Coacervates by Transient Liquid-Liquid Phase Separation.

Authors:  Jie Deng; Andreas Walther
Journal:  Chem       Date:  2020-10-21       Impact factor: 22.804

9.  Multiscale Modeling of Protein-RNA Condensation in and Out of Equilibrium.

Authors:  Rabia Laghmach; Isha Malhotra; Davit A Potoyan
Journal:  Methods Mol Biol       Date:  2023

10.  PhaSePro: the database of proteins driving liquid-liquid phase separation.

Authors:  Bálint Mészáros; Gábor Erdős; Beáta Szabó; Éva Schád; Ágnes Tantos; Rawan Abukhairan; Tamás Horváth; Nikoletta Murvai; Orsolya P Kovács; Márton Kovács; Silvio C E Tosatto; Péter Tompa; Zsuzsanna Dosztányi; Rita Pancsa
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.